RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 CD19P15391 556 aa12.52□□□□□ -0.41
SDHA-215ENST00000512962 AKT2P31751 481 aa12.52□□□□□ -0.41
SDHA-215ENST00000512962 HNRNPKP61978 463 aaKnown RBP eCLIP12.52□□□□□ -0.41
SDHA-215ENST00000512962 CLCQ05315 142 aa12.52□□□□□ -0.41
SDHA-215ENST00000512962 STK38Q15208 465 aa12.52□□□□□ -0.41
SDHA-215ENST00000512962 NR0B2Q15466 257 aa12.52□□□□□ -0.41
SDHA-215ENST00000512962 DLG2Q15700 870 aa12.52□□□□□ -0.41
SDHA-215ENST00000512962 ACCSLQ4AC99 568 aa12.52□□□□□ -0.41
SDHA-215ENST00000512962 KYAT3Q6YP21 454 aaKnown RBP12.52□□□□□ -0.41
SDHA-215ENST00000512962 GK5Q6ZS86 529 aa12.52□□□□□ -0.41
SDHA-215ENST00000512962 C14orf80Q86SX3 495 aa12.52□□□□□ -0.41
SDHA-215ENST00000512962 CHSY1Q86X52 802 aa12.52□□□□□ -0.41
SDHA-215ENST00000512962 SLC35F5Q8WV83 523 aa12.52□□□□□ -0.41
SDHA-215ENST00000512962 SNX21Q969T3 373 aa12.52□□□□□ -0.41
SDHA-215ENST00000512962 GRAMD1AQ96CP6 724 aa12.52□□□□□ -0.41
SDHA-215ENST00000512962 FERD3LQ96RJ6 166 aa12.52□□□□□ -0.41
SDHA-215ENST00000512962 KLF6Q99612 283 aaPredicted RBP12.52□□□□□ -0.41
SDHA-215ENST00000512962 PRMT1Q99873 361 aaKnown RBP12.52□□□□□ -0.41
SDHA-215ENST00000512962 TMEM8AQ9HCN3 771 aa12.52□□□□□ -0.41
SDHA-215ENST00000512962 GEMIN8Q9NWZ8 242 aaKnown RBP12.52□□□□□ -0.41
SDHA-215ENST00000512962 OR51B4Q9Y5P0 310 aa12.52□□□□□ -0.41
SDHA-215ENST00000512962 PRAMEF33A0A0G2JMD5 474 aa12.51□□□□□ -0.41
SDHA-215ENST00000512962 TYW5A2RUC4 315 aaKnown RBP12.51□□□□□ -0.41
SDHA-215ENST00000512962 C1QTNF3-AMACRE9PGA6 284 aa12.51□□□□□ -0.41
SDHA-215ENST00000512962 KPNA3O00505 521 aaPredicted RBP12.51□□□□□ -0.41
SDHA-215ENST00000512962 PRAMEF10O60809 474 aa12.51□□□□□ -0.41
SDHA-215ENST00000512962 PPP6R2O75170 966 aa12.51□□□□□ -0.41
SDHA-215ENST00000512962 LIPCP11150 499 aa12.51□□□□□ -0.41
SDHA-215ENST00000512962 NR2F2P24468 414 aa12.51□□□□□ -0.41
SDHA-215ENST00000512962 GMPRP36959 345 aa12.51□□□□□ -0.41
SDHA-215ENST00000512962 PLK1P53350 603 aa12.51□□□□□ -0.41
SDHA-215ENST00000512962 SPIDRQ14159 915 aa12.51□□□□□ -0.41
SDHA-215ENST00000512962 ZC3H12AQ5D1E8 599 aaKnown RBP12.51□□□□□ -0.41
SDHA-215ENST00000512962 FAM46CQ5VWP2 391 aa12.51□□□□□ -0.41
SDHA-215ENST00000512962 RAB11FIP2Q7L804 512 aa12.51□□□□□ -0.41
SDHA-215ENST00000512962 PARGQ86W56 976 aa12.51□□□□□ -0.41
SDHA-215ENST00000512962 FBXO39Q8N4B4 442 aa12.51□□□□□ -0.41
SDHA-215ENST00000512962 SH2D3CQ8N5H7 860 aa12.51□□□□□ -0.41
SDHA-215ENST00000512962 ZNF564Q8TBZ8 553 aaPredicted RBP12.51□□□□□ -0.41
SDHA-215ENST00000512962 LRRC61Q9BV99 259 aa12.51□□□□□ -0.41
SDHA-215ENST00000512962 CLPBQ9H078 707 aa12.51□□□□□ -0.41
SDHA-215ENST00000512962 MIS12Q9H081 205 aa12.51□□□□□ -0.41
SDHA-215ENST00000512962 PIF1Q9H611 641 aa12.51□□□□□ -0.41
SDHA-215ENST00000512962 PISDQ9UG56 409 aa12.51□□□□□ -0.41
SDHA-215ENST00000512962 CSNK1G3Q9Y6M4 447 aa12.51□□□□□ -0.41
SDHA-215ENST00000512962 ANKRD17O75179 2603 aaKnown RBP12.51□□□□□ -0.41
SDHA-215ENST00000512962 D6RAR5 112 aa12.5□□□□□ -0.41
SDHA-215ENST00000512962 ALOX15BO15296 676 aa12.5□□□□□ -0.41
SDHA-215ENST00000512962 SMAD6O43541 496 aaKnown RBP12.5□□□□□ -0.41
SDHA-215ENST00000512962 SNAP91O60641 907 aa12.5□□□□□ -0.41
SDHA-215ENST00000512962 PCDH8O95206 1070 aa12.5□□□□□ -0.41
SDHA-215ENST00000512962 YEATS4O95619 227 aa12.5□□□□□ -0.41
SDHA-215ENST00000512962 PAK4O96013 591 aaPredicted RBP12.5□□□□□ -0.41
SDHA-215ENST00000512962 SETSIPP0DME0 302 aa12.5□□□□□ -0.41
SDHA-215ENST00000512962 SRCP12931 536 aa12.5□□□□□ -0.41
SDHA-215ENST00000512962 SLC8A3P57103 927 aa12.5□□□□□ -0.41
SDHA-215ENST00000512962 PDE1CQ14123 709 aaPredicted RBP12.5□□□□□ -0.41
SDHA-215ENST00000512962 TCEA2Q15560 299 aa12.5□□□□□ -0.41
SDHA-215ENST00000512962 CBWD6Q4V339 395 aa12.5□□□□□ -0.41
SDHA-215ENST00000512962 CBWD3Q5JTY5 395 aa12.5□□□□□ -0.41
SDHA-215ENST00000512962 CBWD5Q5RIA9 395 aa12.5□□□□□ -0.41
SDHA-215ENST00000512962 KRT39Q6A163 491 aa12.5□□□□□ -0.41
SDHA-215ENST00000512962 DSG4Q86SJ6 1040 aa12.5□□□□□ -0.41
SDHA-215ENST00000512962 DTX1Q86Y01 620 aa12.5□□□□□ -0.41
SDHA-215ENST00000512962 FAM186BQ8IYM0 893 aa12.5□□□□□ -0.41
SDHA-215ENST00000512962 KYQ8NBH2 561 aa12.5□□□□□ -0.41
SDHA-215ENST00000512962 OR2A12Q8NGT7 310 aa12.5□□□□□ -0.41
SDHA-215ENST00000512962 JPH3Q8WXH2 748 aaPredicted RBP12.5□□□□□ -0.41
SDHA-215ENST00000512962 IRGQQ8WZA9 623 aa12.5□□□□□ -0.41
SDHA-215ENST00000512962 ERCC4Q92889 916 aaPredicted RBP12.5□□□□□ -0.41
SDHA-215ENST00000512962 PSMB7Q99436 277 aa12.5□□□□□ -0.41
SDHA-215ENST00000512962 HESX1Q9UBX0 185 aa12.5□□□□□ -0.41
SDHA-215ENST00000512962 TRAF3IP3Q9Y228 551 aa12.5□□□□□ -0.41
SDHA-215ENST00000512962 PLAAQ9Y263 795 aa12.5□□□□□ -0.41
SDHA-215ENST00000512962 FRMD4BQ9Y2L6 1034 aa12.5□□□□□ -0.41
SDHA-215ENST00000512962 C9orf172C9J069 976 aa12.49□□□□□ -0.41
SDHA-215ENST00000512962 RNF225M0QZC1 329 aaPredicted RBP12.49□□□□□ -0.41
SDHA-215ENST00000512962 MAPK13O15264 365 aa12.49□□□□□ -0.41
SDHA-215ENST00000512962 DDX3YO15523 660 aaKnown RBP12.49□□□□□ -0.41
SDHA-215ENST00000512962 ADAM11O75078 769 aa12.49□□□□□ -0.41
SDHA-215ENST00000512962 IGLV3-25P01717 112 aa12.49□□□□□ -0.41
SDHA-215ENST00000512962 RNF224P0DH78 156 aa12.49□□□□□ -0.41
SDHA-215ENST00000512962 ZNF18P17022 549 aa12.49□□□□□ -0.41
SDHA-215ENST00000512962 CHRNA3P32297 505 aa12.49□□□□□ -0.41
SDHA-215ENST00000512962 NNMTP40261 264 aa12.49□□□□□ -0.41
SDHA-215ENST00000512962 MXI1P50539 228 aa12.49□□□□□ -0.41
SDHA-215ENST00000512962 ADKP55263 362 aaKnown RBP12.49□□□□□ -0.41
SDHA-215ENST00000512962 CCL7P80098 99 aa12.49□□□□□ -0.41
SDHA-215ENST00000512962 EIF4EBP2Q13542 120 aaPredicted RBP12.49□□□□□ -0.41
SDHA-215ENST00000512962 CUL2Q13617 745 aa12.49□□□□□ -0.41
SDHA-215ENST00000512962 MANEAQ5SRI9 462 aa12.49□□□□□ -0.41
SDHA-215ENST00000512962 FBXW10Q5XX13 1052 aa12.49□□□□□ -0.41
SDHA-215ENST00000512962 NEK5Q6P3R8 708 aa12.49□□□□□ -0.41
SDHA-215ENST00000512962 INTS8Q75QN2 995 aaKnown RBP12.49□□□□□ -0.41
SDHA-215ENST00000512962 TMPRSS9Q7Z410 1059 aa12.49□□□□□ -0.41
SDHA-215ENST00000512962 SFTPA2Q8IWL1 248 aa12.49□□□□□ -0.41
SDHA-215ENST00000512962 SDR16C5Q8N3Y7 309 aa12.49□□□□□ -0.41
SDHA-215ENST00000512962 FBXL13Q8NEE6 735 aa12.49□□□□□ -0.41
SDHA-215ENST00000512962 ZNF396Q96N95 335 aaPredicted RBP12.49□□□□□ -0.41
SDHA-215ENST00000512962 SERPINB11Q96P15 392 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms