RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 ARHGEF38Q9NXL2 777 aa11.7□□□□□ -0.54
RNF4-216ENST00000511859 ARMCX3Q9UH62 379 aaPredicted RBP11.7□□□□□ -0.54
RNF4-216ENST00000511859 ITM2BQ9Y287 266 aa11.7□□□□□ -0.54
RNF4-216ENST00000511859 ATP6V1DQ9Y5K8 247 aa11.7□□□□□ -0.54
RNF4-216ENST00000511859 DGKBQ9Y6T7 804 aa11.7□□□□□ -0.54
RNF4-216ENST00000511859 CSMD1Q96PZ7 3565 aa11.7□□□□□ -0.54
RNF4-216ENST00000511859 FBN2P35556 2912 aa11.7□□□□□ -0.54
RNF4-216ENST00000511859 A0A1B0GVL5 298 aa11.69□□□□□ -0.54
RNF4-216ENST00000511859 POP4O95707 220 aaKnown RBP11.69□□□□□ -0.54
RNF4-216ENST00000511859 KRT7P08729 469 aa11.69□□□□□ -0.54
RNF4-216ENST00000511859 CMA1P23946 247 aa11.69□□□□□ -0.54
RNF4-216ENST00000511859 MLLT10P55197 1068 aa11.69□□□□□ -0.54
RNF4-216ENST00000511859 KRT85P78386 507 aa11.69□□□□□ -0.54
RNF4-216ENST00000511859 ARF5P84085 180 aa11.69□□□□□ -0.54
RNF4-216ENST00000511859 MC1RQ01726 317 aa11.69□□□□□ -0.54
RNF4-216ENST00000511859 TRA2AQ13595 282 aaKnown RBP eCLIP11.69□□□□□ -0.54
RNF4-216ENST00000511859 HLTFQ14527 1009 aaKnown RBP eCLIP11.69□□□□□ -0.54
RNF4-216ENST00000511859 NFATC4Q14934 902 aa11.69□□□□□ -0.54
RNF4-216ENST00000511859 TCEA2Q15560 299 aa11.69□□□□□ -0.54
RNF4-216ENST00000511859 CRTC2Q53ET0 693 aaPredicted RBP11.69□□□□□ -0.54
RNF4-216ENST00000511859 TAF8Q7Z7C8 310 aa11.69□□□□□ -0.54
RNF4-216ENST00000511859 RYBPQ8N488 228 aaPredicted RBP11.69□□□□□ -0.54
RNF4-216ENST00000511859 GALNT11Q8NCW6 608 aa11.69□□□□□ -0.54
RNF4-216ENST00000511859 ZNF606Q8WXB4 792 aa11.69□□□□□ -0.54
RNF4-216ENST00000511859 KAT5Q92993 513 aa11.69□□□□□ -0.54
RNF4-216ENST00000511859 KIAA1143Q96AT1 154 aaPredicted RBP11.69□□□□□ -0.54
RNF4-216ENST00000511859 APOOQ9BUR5 198 aa11.69□□□□□ -0.54
RNF4-216ENST00000511859 TKTL2Q9H0I9 626 aa11.69□□□□□ -0.54
RNF4-216ENST00000511859 RDH14Q9HBH5 336 aa11.69□□□□□ -0.54
RNF4-216ENST00000511859 ATP13A1Q9HD20 1204 aa11.69□□□□□ -0.54
RNF4-216ENST00000511859 RRN3Q9NYV6 651 aa11.69□□□□□ -0.54
RNF4-216ENST00000511859 KLQ9UEF7 1012 aa11.69□□□□□ -0.54
RNF4-216ENST00000511859 RCOR1Q9UKL0 485 aa11.69□□□□□ -0.54
RNF4-216ENST00000511859 CNTN6Q9UQ52 1028 aa11.69□□□□□ -0.54
RNF4-216ENST00000511859 FCF1Q9Y324 198 aaKnown RBP11.69□□□□□ -0.54
RNF4-216ENST00000511859 B3GALT1Q9Y5Z6 326 aa11.69□□□□□ -0.54
RNF4-216ENST00000511859 IGLV3-10A0A075B6K4 115 aa11.68□□□□□ -0.54
RNF4-216ENST00000511859 IGHV5-10-1A0A0J9YXX1 117 aa11.68□□□□□ -0.54
RNF4-216ENST00000511859 KRIT1O00522 736 aa11.68□□□□□ -0.54
RNF4-216ENST00000511859 B4GAT1O43505 415 aa11.68□□□□□ -0.54
RNF4-216ENST00000511859 RAD1O60671 282 aa11.68□□□□□ -0.54
RNF4-216ENST00000511859 UGT2B4P06133 528 aa11.68□□□□□ -0.54
RNF4-216ENST00000511859 PFKFB1P16118 471 aa11.68□□□□□ -0.54
RNF4-216ENST00000511859 MAP4P27816 1152 aaKnown RBP11.68□□□□□ -0.54
RNF4-216ENST00000511859 GKP32189 559 aa11.68□□□□□ -0.54
RNF4-216ENST00000511859 RIPPLY3P57055 190 aa11.68□□□□□ -0.54
RNF4-216ENST00000511859 SNRPD1P62314 119 aaKnown RBP11.68□□□□□ -0.54
RNF4-216ENST00000511859 CDC20Q12834 499 aa11.68□□□□□ -0.54
RNF4-216ENST00000511859 PDCLQ13371 301 aa11.68□□□□□ -0.54
RNF4-216ENST00000511859 POLD3Q15054 466 aaPredicted RBP11.68□□□□□ -0.54
RNF4-216ENST00000511859 IRF4Q15306 451 aa11.68□□□□□ -0.54
RNF4-216ENST00000511859 MYLK3Q32MK0 819 aa11.68□□□□□ -0.54
RNF4-216ENST00000511859 DCAF12Q5T6F0 453 aa11.68□□□□□ -0.54
RNF4-216ENST00000511859 CAPRIN2Q6IMN6 1127 aaKnown RBP11.68□□□□□ -0.54
RNF4-216ENST00000511859 RRAGAQ7L523 313 aa11.68□□□□□ -0.54
RNF4-216ENST00000511859 TFAP2DQ7Z6R9 452 aa11.68□□□□□ -0.54
RNF4-216ENST00000511859 HEATR4Q86WZ0 1026 aa11.68□□□□□ -0.54
RNF4-216ENST00000511859 IRF2BP1Q8IU81 584 aa11.68□□□□□ -0.54
RNF4-216ENST00000511859 AGBL5Q8NDL9 886 aa11.68□□□□□ -0.54
RNF4-216ENST00000511859 RCBTB1Q8NDN9 531 aa11.68□□□□□ -0.54
RNF4-216ENST00000511859 OR2AP1Q8NGE2 309 aa11.68□□□□□ -0.54
RNF4-216ENST00000511859 SPATA32Q96LK8 384 aa11.68□□□□□ -0.54
RNF4-216ENST00000511859 KLHL32Q96NJ5 620 aa11.68□□□□□ -0.54
RNF4-216ENST00000511859 TSG101Q99816 390 aa11.68□□□□□ -0.54
RNF4-216ENST00000511859 TM6SF2Q9BZW4 377 aa11.68□□□□□ -0.54
RNF4-216ENST00000511859 DPEP2Q9H4A9 486 aa11.68□□□□□ -0.54
RNF4-216ENST00000511859 GPN2Q9H9Y4 310 aaPredicted RBP11.68□□□□□ -0.54
RNF4-216ENST00000511859 PRDM8Q9NQV8 689 aa11.68□□□□□ -0.54
RNF4-216ENST00000511859 MPP6Q9NZW5 540 aa11.68□□□□□ -0.54
RNF4-216ENST00000511859 EFCAB7A8K855 629 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 P4HA2O15460 535 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 LETM1O95202 739 aaPredicted RBP11.67□□□□□ -0.54
RNF4-216ENST00000511859 CD160O95971 181 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 GSRP00390 522 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 F9P00740 461 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 CSTF2P33240 577 aaKnown RBP eCLIP11.67□□□□□ -0.54
RNF4-216ENST00000511859 CXCR3P49682 368 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 SUOXP51687 545 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 GEMIN4P57678 1058 aaKnown RBP11.67□□□□□ -0.54
RNF4-216ENST00000511859 SNX16P57768 344 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 RAB15P59190 212 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 GNA12Q03113 381 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 RAD51Q06609 339 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 INPP5AQ14642 412 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 WSCD2Q2TBF2 565 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 DEFB109BQ30KR1 87 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 AMZ1Q400G9 498 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 TCTN3Q6NUS6 607 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 GDPD4Q6W3E5 623 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 EFCAB3Q8N7B9 438 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 LMO3Q8TAP4 145 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 ART4Q93070 314 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 WDR92Q96MX6 357 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 TEFMQ96QE5 360 aaKnown RBP11.67□□□□□ -0.54
RNF4-216ENST00000511859 DPYSL5Q9BPU6 564 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 SLC39A1Q9NY26 324 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 PILRAQ9UKJ1 303 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 SRPK3Q9UPE1 567 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 HPSEQ9Y251 543 aa11.67□□□□□ -0.54
RNF4-216ENST00000511859 TP53TG5Q9Y2B4 290 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms