RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 LRRC31Q6UY01 552 aa19.23■□□□□ 0.67
HMGCS1-206ENST00000511774 OR2AP1Q8NGE2 309 aa19.23■□□□□ 0.67
HMGCS1-206ENST00000511774 SCG3Q8WXD2 468 aaKnown RBP19.23■□□□□ 0.67
HMGCS1-206ENST00000511774 ARHGEF2Q92974 986 aaKnown RBP19.23■□□□□ 0.67
HMGCS1-206ENST00000511774 NKD1Q969G9 470 aa19.23■□□□□ 0.67
HMGCS1-206ENST00000511774 PGAP3Q96FM1 320 aaPredicted RBP19.23■□□□□ 0.67
HMGCS1-206ENST00000511774 GSDMAQ96QA5 445 aa19.23■□□□□ 0.67
HMGCS1-206ENST00000511774 RAB6CQ9H0N0 254 aa19.23■□□□□ 0.67
HMGCS1-206ENST00000511774 GDPD2Q9HCC8 539 aa19.23■□□□□ 0.67
HMGCS1-206ENST00000511774 PLCB1Q9NQ66 1216 aa19.23■□□□□ 0.67
HMGCS1-206ENST00000511774 PCDHGC3Q9UN70 934 aa19.23■□□□□ 0.67
HMGCS1-206ENST00000511774 OR1A2Q9Y585 309 aa19.23■□□□□ 0.67
HMGCS1-206ENST00000511774 PCDHB11Q9Y5F2 797 aa19.23■□□□□ 0.67
HMGCS1-206ENST00000511774 BLACEA4D250 179 aa19.22■□□□□ 0.67
HMGCS1-206ENST00000511774 RASGRP1O95267 797 aa19.22■□□□□ 0.67
HMGCS1-206ENST00000511774 TIMP2P16035 220 aa19.22■□□□□ 0.67
HMGCS1-206ENST00000511774 BLKP51451 505 aa19.22■□□□□ 0.67
HMGCS1-206ENST00000511774 SRP54P61011 504 aaKnown RBP19.22■□□□□ 0.67
HMGCS1-206ENST00000511774 DEUP1Q05D60 604 aa19.22■□□□□ 0.67
HMGCS1-206ENST00000511774 NFATC4Q14934 902 aa19.22■□□□□ 0.67
HMGCS1-206ENST00000511774 ARHGAP44Q17R89 818 aa19.22■□□□□ 0.67
HMGCS1-206ENST00000511774 MYLK3Q32MK0 819 aa19.22■□□□□ 0.67
HMGCS1-206ENST00000511774 C4orf17Q53FE4 359 aa19.22■□□□□ 0.67
HMGCS1-206ENST00000511774 PHF19Q5T6S3 580 aa19.22■□□□□ 0.67
HMGCS1-206ENST00000511774 OGFOD3Q6PK18 319 aa19.22■□□□□ 0.67
HMGCS1-206ENST00000511774 TTC7BQ86TV6 843 aa19.22■□□□□ 0.67
HMGCS1-206ENST00000511774 GKN2Q86XP6 184 aa19.22■□□□□ 0.67
HMGCS1-206ENST00000511774 FMR1NBQ8N0W7 255 aaPredicted RBP19.22■□□□□ 0.67
HMGCS1-206ENST00000511774 RBM15Q96T37 977 aaKnown RBP eCLIP19.22■□□□□ 0.674e-9■■■■■ 27.6
HMGCS1-206ENST00000511774 CMKLR1Q99788 373 aa19.22■□□□□ 0.67
HMGCS1-206ENST00000511774 CRACR2AQ9BSW2 395 aa19.22■□□□□ 0.67
HMGCS1-206ENST00000511774 RDH14Q9HBH5 336 aa19.22■□□□□ 0.67
HMGCS1-206ENST00000511774 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.22■□□□□ 0.67
HMGCS1-206ENST00000511774 AJAP1Q9UKB5 411 aaPredicted RBP19.22■□□□□ 0.67
HMGCS1-206ENST00000511774 PLAAQ9Y263 795 aa19.22■□□□□ 0.67
HMGCS1-206ENST00000511774 TOR1BO14657 336 aa19.21■□□□□ 0.67
HMGCS1-206ENST00000511774 GSRP00390 522 aa19.21■□□□□ 0.67
HMGCS1-206ENST00000511774 LIFP15018 202 aa19.21■□□□□ 0.67
HMGCS1-206ENST00000511774 GLB1P16278 677 aa19.21■□□□□ 0.67
HMGCS1-206ENST00000511774 USP8P40818 1118 aa19.21■□□□□ 0.67
HMGCS1-206ENST00000511774 PEX5P50542 639 aa19.21■□□□□ 0.67
HMGCS1-206ENST00000511774 B4GALNT1Q00973 533 aa19.21■□□□□ 0.67
HMGCS1-206ENST00000511774 CACNA1DQ01668 2161 aa19.21■□□□□ 0.67
HMGCS1-206ENST00000511774 FOXR2Q6PJQ5 311 aa19.21■□□□□ 0.67
HMGCS1-206ENST00000511774 BNIPLQ7Z465 357 aa19.21■□□□□ 0.67
HMGCS1-206ENST00000511774 RCBTB1Q8NDN9 531 aa19.21■□□□□ 0.67
HMGCS1-206ENST00000511774 CXorf40AQ8TE69 158 aa19.21■□□□□ 0.67
HMGCS1-206ENST00000511774 OR1E3Q8WZA6 343 aa19.21■□□□□ 0.67
HMGCS1-206ENST00000511774 TMEM159Q96B96 161 aa19.21■□□□□ 0.67
HMGCS1-206ENST00000511774 APOOQ9BUR5 198 aa19.21■□□□□ 0.67
HMGCS1-206ENST00000511774 MAGEB5Q9BZ81 275 aa19.21■□□□□ 0.67
HMGCS1-206ENST00000511774 ZYG11BQ9C0D3 744 aa19.21■□□□□ 0.67
HMGCS1-206ENST00000511774 ZNF71Q9NQZ8 489 aaPredicted RBP19.21■□□□□ 0.67
HMGCS1-206ENST00000511774 DAAM1Q9Y4D1 1078 aa19.21■□□□□ 0.67
HMGCS1-206ENST00000511774 B4GAT1O43505 415 aa19.2■□□□□ 0.66
HMGCS1-206ENST00000511774 POP4O95707 220 aaKnown RBP19.2■□□□□ 0.66
HMGCS1-206ENST00000511774 BMP6P22004 513 aa19.2■□□□□ 0.66
HMGCS1-206ENST00000511774 CD82P27701 267 aa19.2■□□□□ 0.66
HMGCS1-206ENST00000511774 FLT3P36888 993 aa19.2■□□□□ 0.66
HMGCS1-206ENST00000511774 HLTFQ14527 1009 aaKnown RBP eCLIP19.2■□□□□ 0.66
HMGCS1-206ENST00000511774 INPP5AQ14642 412 aa19.2■□□□□ 0.66
HMGCS1-206ENST00000511774 LRRC14Q15048 493 aa19.2■□□□□ 0.66
HMGCS1-206ENST00000511774 EFHC2Q5JST6 749 aa19.2■□□□□ 0.66
HMGCS1-206ENST00000511774 GDPD4Q6W3E5 623 aa19.2■□□□□ 0.66
HMGCS1-206ENST00000511774 FAM26EQ8N5C1 309 aa19.2■□□□□ 0.66
HMGCS1-206ENST00000511774 OR6C4Q8NGE1 309 aa19.2■□□□□ 0.66
HMGCS1-206ENST00000511774 CCL4L1Q8NHW4 92 aa19.2■□□□□ 0.66
HMGCS1-206ENST00000511774 ARHGEF26Q96DR7 871 aa19.2■□□□□ 0.66
HMGCS1-206ENST00000511774 MRPL40Q9NQ50 206 aaKnown RBP19.2■□□□□ 0.66
HMGCS1-206ENST00000511774 RRN3Q9NYV6 651 aa19.2■□□□□ 0.66
HMGCS1-206ENST00000511774 LRIT1Q9P2V4 623 aa19.2■□□□□ 0.66
HMGCS1-206ENST00000511774 KLQ9UEF7 1012 aa19.2■□□□□ 0.66
HMGCS1-206ENST00000511774 NEU3Q9UQ49 428 aa19.2■□□□□ 0.66
HMGCS1-206ENST00000511774 LRBAP50851 2863 aa19.2■□□□□ 0.66
HMGCS1-206ENST00000511774 PSMA7O14818 248 aa19.19■□□□□ 0.66
HMGCS1-206ENST00000511774 INSIG1O15503 277 aa19.19■□□□□ 0.66
HMGCS1-206ENST00000511774 PNMA6AP0CW24 399 aaPredicted RBP19.19■□□□□ 0.66
HMGCS1-206ENST00000511774 FGF3P11487 239 aaPredicted RBP19.19■□□□□ 0.66
HMGCS1-206ENST00000511774 SLC9A1P19634 815 aa19.19■□□□□ 0.66
HMGCS1-206ENST00000511774 SERINC3Q13530 473 aa19.19■□□□□ 0.66
HMGCS1-206ENST00000511774 SLC25A52Q3SY17 297 aa19.19■□□□□ 0.66
HMGCS1-206ENST00000511774 TMEM52BQ4KMG9 183 aa19.19■□□□□ 0.66
HMGCS1-206ENST00000511774 KLHL10Q6JEL2 608 aa19.19■□□□□ 0.66
HMGCS1-206ENST00000511774 NLRP14Q86W24 1093 aa19.19■□□□□ 0.66
HMGCS1-206ENST00000511774 FAM131BQ86XD5 332 aa19.19■□□□□ 0.66
HMGCS1-206ENST00000511774 PLA2G15Q8NCC3 412 aa19.19■□□□□ 0.66
HMGCS1-206ENST00000511774 SHC3Q92529 594 aa19.19■□□□□ 0.66
HMGCS1-206ENST00000511774 DHTKD1Q96HY7 919 aaPredicted RBP19.19■□□□□ 0.66
HMGCS1-206ENST00000511774 NUDT22Q9BRQ3 303 aa19.19■□□□□ 0.66
HMGCS1-206ENST00000511774 C1QTNF7Q9BXJ2 289 aa19.19■□□□□ 0.66
HMGCS1-206ENST00000511774 FGF22Q9HCT0 170 aa19.19■□□□□ 0.66
HMGCS1-206ENST00000511774 TUBD1Q9UJT1 453 aa19.19■□□□□ 0.66
HMGCS1-206ENST00000511774 TMEM202A6NGA9 273 aa19.18■□□□□ 0.66
HMGCS1-206ENST00000511774 B4DGG1 531 aa19.18■□□□□ 0.66
HMGCS1-206ENST00000511774 PPP1R3GB7ZBB8 358 aa19.18■□□□□ 0.66
HMGCS1-206ENST00000511774 STMND1H3BQB6 276 aa19.18■□□□□ 0.66
HMGCS1-206ENST00000511774 HSP90AA1P07900 732 aaKnown RBP19.18■□□□□ 0.66
HMGCS1-206ENST00000511774 PNLIPP16233 465 aa19.18■□□□□ 0.66
HMGCS1-206ENST00000511774 SNRPD1P62314 119 aaKnown RBP19.18■□□□□ 0.66
HMGCS1-206ENST00000511774 NCAPHQ15003 741 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms