RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 SLC7A1P30825 629 aa7.38□□□□□ -1.23
CPNE4-208ENST00000511604 RPL9P32969 192 aaKnown RBP7.38□□□□□ -1.23
CPNE4-208ENST00000511604 TRIM23P36406 574 aa7.38□□□□□ -1.23
CPNE4-208ENST00000511604 ADCY7P51828 1080 aa7.38□□□□□ -1.23
CPNE4-208ENST00000511604 MGAT3Q09327 533 aa7.38□□□□□ -1.23
CPNE4-208ENST00000511604 SP140Q13342 867 aa7.38□□□□□ -1.23
CPNE4-208ENST00000511604 TBRG1Q3YBR2 411 aa7.38□□□□□ -1.23
CPNE4-208ENST00000511604 CCNYL2Q5T2Q4 361 aa7.38□□□□□ -1.23
CPNE4-208ENST00000511604 GRTP1Q5TC63 336 aa7.38□□□□□ -1.23
CPNE4-208ENST00000511604 ATF7IP2Q5U623 682 aa7.38□□□□□ -1.23
CPNE4-208ENST00000511604 PMF1Q6P1K2 205 aa7.38□□□□□ -1.23
CPNE4-208ENST00000511604 MFSD7Q6UXD7 560 aa7.38□□□□□ -1.23
CPNE4-208ENST00000511604 ADCK1Q86TW2 530 aa7.38□□□□□ -1.23
CPNE4-208ENST00000511604 NOXA1Q86UR1 476 aa7.38□□□□□ -1.23
CPNE4-208ENST00000511604 TXNRD3Q86VQ6 643 aa7.38□□□□□ -1.23
CPNE4-208ENST00000511604 NDUFAF2Q8N183 169 aa7.38□□□□□ -1.23
CPNE4-208ENST00000511604 LRRC47Q8N1G4 583 aaKnown RBP7.38□□□□□ -1.23
CPNE4-208ENST00000511604 SFRP1Q8N474 314 aa7.38□□□□□ -1.23
CPNE4-208ENST00000511604 NKD2Q969F2 451 aaPredicted RBP7.38□□□□□ -1.23
CPNE4-208ENST00000511604 FBXW5Q969U6 566 aa7.38□□□□□ -1.23
CPNE4-208ENST00000511604 ASB9Q96DX5 294 aa7.38□□□□□ -1.23
CPNE4-208ENST00000511604 RNPEPQ9H4A4 650 aa7.38□□□□□ -1.23
CPNE4-208ENST00000511604 RAVER2Q9HCJ3 691 aaKnown RBP7.38□□□□□ -1.23
CPNE4-208ENST00000511604 MAP3K20Q9NYL2 800 aaKnown RBP7.38□□□□□ -1.23
CPNE4-208ENST00000511604 DPP7Q9UHL4 492 aa7.38□□□□□ -1.23
CPNE4-208ENST00000511604 CNOT6Q9ULM6 557 aaKnown RBP7.38□□□□□ -1.23
CPNE4-208ENST00000511604 PCDHGC3Q9UN70 934 aa7.38□□□□□ -1.23
CPNE4-208ENST00000511604 CACNG2Q9Y698 323 aa7.38□□□□□ -1.23
CPNE4-208ENST00000511604 MYH9P35579 1960 aaKnown RBP7.38□□□□□ -1.23
CPNE4-208ENST00000511604 ZNFX1Q9P2E3 1918 aaKnown RBP7.37□□□□□ -1.23
CPNE4-208ENST00000511604 RGSL1A5PLK6 1076 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 SAGE2PA6NJ88 616 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 LRRC72A6NJI9 287 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 SAC3D1A6NKF1 404 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 C9IYK1 514 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 H3BMM5 538 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 M0R3G1 203 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 DNAJB5O75953 348 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 SEC24AO95486 1093 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 CALB1P05937 261 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 CLEC2LP0C7M8 214 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 HOXB3P14651 431 aaPredicted RBP7.37□□□□□ -1.23
CPNE4-208ENST00000511604 CYP11B1P15538 503 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 IL12AP29459 219 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 SLC1A6P48664 564 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 MAPK12P53778 367 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 NLRP11P59045 1033 aaKnown RBP7.37□□□□□ -1.23
CPNE4-208ENST00000511604 SNAP25P60880 206 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 POLD3Q15054 466 aaPredicted RBP7.37□□□□□ -1.23
CPNE4-208ENST00000511604 EML3Q32P44 896 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 HABP4Q5JVS0 413 aaKnown RBP7.37□□□□□ -1.23
CPNE4-208ENST00000511604 PPP1R26Q5T8A7 1209 aaPredicted RBP7.37□□□□□ -1.23
CPNE4-208ENST00000511604 INTS11Q5TA45 600 aaKnown RBP7.37□□□□□ -1.23
CPNE4-208ENST00000511604 TTC39BQ5VTQ0 682 aaPredicted RBP7.37□□□□□ -1.23
CPNE4-208ENST00000511604 ARHGEF16Q5VV41 709 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 TMEM65Q6PI78 240 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 DPY19L3Q6ZPD9 716 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 GDPD3Q7L5L3 318 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 CDH24Q86UP0 819 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 AMIGO1Q86WK6 493 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 MAPKAPK5Q8IW41 473 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 UBQLNLQ8IYU4 475 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 MYCT1Q8N699 235 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 OR7A2PQ8NGA2 310 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 PHF10Q8WUB8 498 aaKnown RBP7.37□□□□□ -1.23
CPNE4-208ENST00000511604 LRRN4Q8WUT4 740 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 DDX1Q92499 740 aaKnown RBP7.37□□□□□ -1.23
CPNE4-208ENST00000511604 CPT1BQ92523 772 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 TESCQ96BS2 214 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 RCN3Q96D15 328 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 PPP1R36Q96LQ0 422 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 SAMD11Q96NU1 681 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 KIFC1Q9BW19 673 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.37□□□□□ -1.23
CPNE4-208ENST00000511604 MIR1-1HGQ9H1L0 117 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 SLC6A17Q9H1V8 727 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 DSN1Q9H410 356 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 EPS8L2Q9H6S3 715 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 ZNF556Q9HAH1 456 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 SMYD2Q9NRG4 433 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 AGPAT3Q9NRZ7 376 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 DTLQ9NZJ0 730 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 EMC3Q9P0I2 261 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 TEKT2Q9UIF3 430 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 AP4E1Q9UPM8 1137 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 RAD54BQ9Y620 910 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 KCNE2Q9Y6J6 123 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 UBE4BO95155 1302 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 SPATA31A5Q5VU36 1347 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 SPATA31A7Q8IWB4 1347 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 GOLGB1Q14789 3259 aaKnown RBP7.37□□□□□ -1.23
CPNE4-208ENST00000511604 TAF1LQ8IZX4 1826 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 TANC1Q9C0D5 1861 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 KIF1AQ12756 1690 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 TCRBV9S1A1TA0A576 114 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 E2F8A0AVK6 867 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 GPR25O00155 361 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 TRIM38O00635 465 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 B4GAT1O43505 415 aa7.37□□□□□ -1.23
CPNE4-208ENST00000511604 XYLBO75191 536 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms