RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 PSMA4P25789 261 aaKnown RBP3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 RYKP34925 604 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 BSGP35613 385 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 PBX3P40426 434 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 EIF5P55010 431 aaKnown RBP3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 NAP1L1P55209 391 aaKnown RBP3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 MAMLD1Q13495 774 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 FRG1Q14331 258 aaKnown RBP3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 LPIN1Q14693 890 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 CCNG2Q16589 344 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 DPCR1Q3MIW9 517 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 ESCO2Q56NI9 601 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 DCAF12L2Q5VW00 463 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 SNX30Q5VWJ9 437 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 TXNDC8Q6A555 127 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 TSSK4Q6SA08 328 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 Q6ZTK2 550 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 DENND6AQ8IWF6 608 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 ADSSL1Q8N142 457 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 NGEFQ8N5V2 710 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 PARP16Q8N5Y8 322 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 FRMD1Q8N878 549 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 NRACQ8N912 160 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 MIGA1Q8NAN2 632 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 MCPH1Q8NEM0 835 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 ENGASEQ8NFI3 743 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 GABPB2Q8TAK5 448 aaPredicted RBP3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 BICD2Q8TD16 824 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 INPP5DQ92835 1189 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 OTULINQ96BN8 352 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 PABPC5Q96DU9 382 aaKnown RBP3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 MXRA8Q9BRK3 442 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 SDF4Q9BRK5 362 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 FTOQ9C0B1 505 aaKnown RBP eCLIP3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 KIF9Q9HAQ2 790 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 SLC6A13Q9NSD5 602 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 TBC1D22BQ9NU19 505 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 NCKIPSDQ9NZQ3 722 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 ZNF70Q9UC06 446 aaPredicted RBP3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 HAO1Q9UJM8 370 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 FBXO2Q9UK22 296 aaPredicted RBP3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 INTS6Q9UL03 887 aaKnown RBP3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 AAR2Q9Y312 384 aaKnown RBP3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 PSAT1Q9Y617 370 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 SQORQ9Y6N5 450 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 SCINQ9Y6U3 715 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 CAPN7Q9Y6W3 813 aa3.56□□□□□ -1.84
TRAPPC11-207ENST00000511409 ZNF521Q96K83 1311 aa3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 RPS10-NUDT3A0A1W2PQS6 291 aa3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 USP17L23D6RBM5 183 aa3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 NPIPB11E5RHQ5 1161 aa3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 AP3D1O14617 1153 aa3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 SEC14L5O43304 696 aa3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 LIASO43766 372 aa3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 SCGB1D1O95968 90 aa3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 MT-CYBP00156 380 aaPredicted RBP3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 ACADMP11310 421 aa3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 PSG1P11464 419 aa3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 PPARGP37231 505 aaPredicted RBP3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 GABRB2P47870 512 aa3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 ZNF81P51508 661 aa3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 P2RX3P56373 397 aa3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 SELENOVP59797 346 aa3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 FAM27E3Q08E93 113 aa3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 GRIK3Q13003 919 aa3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 EIF4A2Q14240 407 aaKnown RBP3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 TCTN1Q2MV58 587 aa3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 COL28A1Q2UY09 1125 aa3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 LCTLQ6UWM7 567 aa3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 IKBIPQ70UQ0 350 aa3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 PIP4P1Q86T03 277 aa3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 NOXA1Q86UR1 476 aa3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 RBFAQ8N0V3 343 aa3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 C7orf57Q8NEG2 295 aa3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 FAM149B1Q96BN6 582 aa3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 ZNF570Q96NI8 536 aa3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 TMEM79Q9BSE2 394 aa3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 GLIS2Q9BZE0 524 aaPredicted RBP3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 CATSPERBQ9H7T0 1116 aa3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 KRCC1Q9NPI7 259 aaPredicted RBP3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 SMYD2Q9NRG4 433 aa3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 ANKRD10Q9NXR5 420 aa3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 EHD2Q9NZN4 543 aa3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 CORO1CQ9ULV4 474 aaPredicted RBP3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 LSM4Q9Y4Z0 139 aaKnown RBP3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 SRPRBQ9Y5M8 271 aaKnown RBP3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 A3GALT2U3KPV4 340 aa3.55□□□□□ -1.84
TRAPPC11-207ENST00000511409 COL3A1P02461 1466 aaPredicted RBP3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 ANKRD18BA2A2Z9 1011 aa3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 KRTAP29-1A8MX34 341 aaPredicted RBP3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 MS4A18H0YCH9 400 aa3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 ITM2AO43736 263 aa3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 MOSPD3O75425 235 aa3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 ETFAP13804 333 aa3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 IL7RP16871 459 aa3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 ITGAXP20702 1163 aa3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 TBXAS1P24557 533 aaPredicted RBP3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 DCTDP32321 178 aa3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 PIP4K2AP48426 406 aaPredicted RBP3.54□□□□□ -1.84
TRAPPC11-207ENST00000511409 CXCR3P49682 368 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms