RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 BUD23O43709 281 aaKnown RBP5.46□□□□□ -1.53
PROM1-211ENST00000511153 RNASEH2AO75792 299 aaKnown RBP5.46□□□□□ -1.53
PROM1-211ENST00000511153 METTL18O95568 372 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 IGSF6O95976 241 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 SRPRAP08240 638 aaKnown RBP5.46□□□□□ -1.53
PROM1-211ENST00000511153 MMP2P08253 660 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 PDHA1P08559 390 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 ALPIP09923 528 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 TPH1P17752 444 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 CCNCP24863 283 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 MAT2AP31153 395 aaKnown RBP5.46□□□□□ -1.53
PROM1-211ENST00000511153 CHRNA3P32297 505 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 SLC8A1P32418 973 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 CD68P34810 354 aaPredicted RBP5.46□□□□□ -1.53
PROM1-211ENST00000511153 PTPN7P35236 360 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 PAFAH1B1P43034 410 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 CXCL12P48061 93 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 ZNF135P52742 658 aaPredicted RBP5.46□□□□□ -1.53
PROM1-211ENST00000511153 COPAP53621 1224 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 RPS14P62263 151 aaKnown RBP5.46□□□□□ -1.53
PROM1-211ENST00000511153 SNRPD1P62314 119 aaKnown RBP5.46□□□□□ -1.53
PROM1-211ENST00000511153 SLC7A5Q01650 507 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 SULT2A1Q06520 285 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 CNTN1Q12860 1018 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 TRAF2Q12933 501 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 EIF4HQ15056 248 aaKnown RBP5.46□□□□□ -1.53
PROM1-211ENST00000511153 MYLK3Q32MK0 819 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 HNRNPA1L2Q32P51 320 aaKnown RBP5.46□□□□□ -1.53
PROM1-211ENST00000511153 FBXO43Q4G163 708 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 PREPLQ4J6C6 727 aaPredicted RBP5.46□□□□□ -1.53
PROM1-211ENST00000511153 ANKRD20A2Q5SQ80 823 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 CFAP58Q5T655 872 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 ACBD5Q5T8D3 534 aaPredicted RBP5.46□□□□□ -1.53
PROM1-211ENST00000511153 ANKRD20A1Q5TYW2 823 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 ANKRD20A3Q5VUR7 823 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 TIGD7Q6NT04 549 aaPredicted RBP5.46□□□□□ -1.53
PROM1-211ENST00000511153 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.46□□□□□ -1.53
PROM1-211ENST00000511153 PRICKLE2Q7Z3G6 844 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 SRLQ86TD4 932 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 RASGEF1CQ8N431 466 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 HDDC3Q8N4P3 179 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 LPCAT1Q8NF37 534 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 IPMKQ8NFU5 416 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 KIF18AQ8NI77 898 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 SLC35B2Q8TB61 432 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 OR8D1Q8WZ84 308 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 SNX19Q92543 992 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 PRCCQ92733 491 aaPredicted RBP5.46□□□□□ -1.53
PROM1-211ENST00000511153 ACDQ96AP0 544 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 MRRFQ96E11 262 aaKnown RBP5.46□□□□□ -1.53
PROM1-211ENST00000511153 MSANTD3Q96H12 275 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 PWWP2AQ96N64 755 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 LRFN3Q9BTN0 628 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 WRAP53Q9BUR4 548 aaKnown RBP5.46□□□□□ -1.53
PROM1-211ENST00000511153 FICDQ9BVA6 458 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 CARD6Q9BX69 1037 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 CAAP1Q9H8G2 361 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 PRDM16Q9HAZ2 1276 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 USP29Q9HBJ7 922 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 GLOD4Q9HC38 313 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 ATP13A2Q9NQ11 1180 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 TMEM51Q9NW97 253 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.46□□□□□ -1.53
PROM1-211ENST00000511153 SEPT3Q9UH03 358 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 EBF1Q9UH73 591 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 IL36AQ9UHA7 158 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 AMACRQ9UHK6 382 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 HS3ST2Q9Y278 367 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 COQ6Q9Y2Z9 468 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 STARD13Q9Y3M8 1113 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 R4GN57 208 aa5.46□□□□□ -1.53
PROM1-211ENST00000511153 V9GYY5 206 aaPredicted RBP5.46□□□□□ -1.53
PROM1-211ENST00000511153 KMT2EQ8IZD2 1858 aa5.46□□□□□ -1.54
PROM1-211ENST00000511153 MYLKQ15746 1914 aa5.46□□□□□ -1.54
PROM1-211ENST00000511153 A0A0A0MRY4 1105 aa5.46□□□□□ -1.54
PROM1-211ENST00000511153 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.46□□□□□ -1.54
PROM1-211ENST00000511153 GOLGA6L10A0A0M3HER8 536 aa5.46□□□□□ -1.54
PROM1-211ENST00000511153 TCRBV7S3A2A0A539 114 aa5.46□□□□□ -1.54
PROM1-211ENST00000511153 ZSCAN5CA6NGD5 496 aaPredicted RBP5.46□□□□□ -1.54
PROM1-211ENST00000511153 ZNF487B1APH4 448 aa5.46□□□□□ -1.54
PROM1-211ENST00000511153 K7ESF4 209 aa5.46□□□□□ -1.54
PROM1-211ENST00000511153 TTI1O43156 1089 aa5.46□□□□□ -1.54
PROM1-211ENST00000511153 PHF2O75151 1096 aa5.46□□□□□ -1.54
PROM1-211ENST00000511153 AGTP01019 485 aa5.46□□□□□ -1.54
PROM1-211ENST00000511153 KRT14P02533 472 aa5.46□□□□□ -1.54
PROM1-211ENST00000511153 ACADMP11310 421 aa5.46□□□□□ -1.54
PROM1-211ENST00000511153 BCKDHBP21953 392 aa5.46□□□□□ -1.54
PROM1-211ENST00000511153 MAOBP27338 520 aa5.46□□□□□ -1.54
PROM1-211ENST00000511153 RPL22P35268 128 aaKnown RBP5.46□□□□□ -1.54
PROM1-211ENST00000511153 COILP38432 576 aaPredicted RBP5.46□□□□□ -1.54
PROM1-211ENST00000511153 NR2C2P49116 596 aa5.46□□□□□ -1.54
PROM1-211ENST00000511153 LMAN1P49257 510 aa5.46□□□□□ -1.54
PROM1-211ENST00000511153 RENBPP51606 427 aa5.46□□□□□ -1.54
PROM1-211ENST00000511153 FAM193AP78312 1265 aa5.46□□□□□ -1.54
PROM1-211ENST00000511153 BASP1P80723 227 aaKnown RBP5.46□□□□□ -1.54
PROM1-211ENST00000511153 PPP1R7Q15435 360 aa5.46□□□□□ -1.54
PROM1-211ENST00000511153 TRADDQ15628 312 aa5.46□□□□□ -1.54
PROM1-211ENST00000511153 OASLQ15646 514 aaKnown RBP5.46□□□□□ -1.54
PROM1-211ENST00000511153 CST6Q15828 149 aa5.46□□□□□ -1.54
PROM1-211ENST00000511153 CCDC6Q16204 474 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms