RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 CXADRP78310 365 aa11.04□□□□□ -0.64
RNF4-212ENST00000509258 GABREP78334 506 aa11.04□□□□□ -0.64
RNF4-212ENST00000509258 SGCGQ13326 291 aa11.04□□□□□ -0.64
RNF4-212ENST00000509258 FZD2Q14332 565 aa11.04□□□□□ -0.64
RNF4-212ENST00000509258 BROXQ5VW32 411 aa11.04□□□□□ -0.64
RNF4-212ENST00000509258 AFMIDQ63HM1 303 aa11.04□□□□□ -0.64
RNF4-212ENST00000509258 KYAT3Q6YP21 454 aaKnown RBP11.04□□□□□ -0.64
RNF4-212ENST00000509258 Q6ZSR6 202 aa11.04□□□□□ -0.64
RNF4-212ENST00000509258 PARGQ86W56 976 aa11.04□□□□□ -0.64
RNF4-212ENST00000509258 FAM181AQ8N9Y4 354 aa11.04□□□□□ -0.64
RNF4-212ENST00000509258 HIC2Q96JB3 615 aa11.04□□□□□ -0.64
RNF4-212ENST00000509258 VCPIP1Q96JH7 1222 aa11.04□□□□□ -0.64
RNF4-212ENST00000509258 BTBD6Q96KE9 485 aa11.04□□□□□ -0.64
RNF4-212ENST00000509258 APOLD1Q96LR9 279 aa11.04□□□□□ -0.64
RNF4-212ENST00000509258 C1QTNF2Q9BXJ5 285 aa11.04□□□□□ -0.64
RNF4-212ENST00000509258 NAT10Q9H0A0 1025 aaKnown RBP11.04□□□□□ -0.64
RNF4-212ENST00000509258 ABCG4Q9H172 646 aa11.04□□□□□ -0.64
RNF4-212ENST00000509258 TCEAL2Q9H3H9 227 aaPredicted RBP11.04□□□□□ -0.64
RNF4-212ENST00000509258 DHX35Q9H5Z1 703 aaKnown RBP11.04□□□□□ -0.64
RNF4-212ENST00000509258 DNAJC28Q9NX36 388 aa11.04□□□□□ -0.64
RNF4-212ENST00000509258 CNOT8Q9UFF9 292 aaKnown RBP11.04□□□□□ -0.64
RNF4-212ENST00000509258 COQ6Q9Y2Z9 468 aa11.04□□□□□ -0.64
RNF4-212ENST00000509258 UNC13CQ8NB66 2214 aa11.04□□□□□ -0.64
RNF4-212ENST00000509258 TTC24A2A3L6 582 aaPredicted RBP11.03□□□□□ -0.64
RNF4-212ENST00000509258 CAPN8A6NHC0 703 aa11.03□□□□□ -0.64
RNF4-212ENST00000509258 SMTNL1A8MU46 457 aa11.03□□□□□ -0.64
RNF4-212ENST00000509258 ERVH48-1M5A8F1 160 aa11.03□□□□□ -0.64
RNF4-212ENST00000509258 NEMP1O14524 444 aa11.03□□□□□ -0.64
RNF4-212ENST00000509258 FPGTO14772 594 aa11.03□□□□□ -0.64
RNF4-212ENST00000509258 MUSKO15146 869 aa11.03□□□□□ -0.64
RNF4-212ENST00000509258 PRAMEF11O60813 436 aa11.03□□□□□ -0.64
RNF4-212ENST00000509258 MMP20O60882 483 aa11.03□□□□□ -0.64
RNF4-212ENST00000509258 USP12O75317 370 aa11.03□□□□□ -0.64
RNF4-212ENST00000509258 CSO75390 466 aaKnown RBP11.03□□□□□ -0.64
RNF4-212ENST00000509258 MPOP05164 745 aa11.03□□□□□ -0.64
RNF4-212ENST00000509258 NME1P15531 152 aaKnown RBP11.03□□□□□ -0.64
RNF4-212ENST00000509258 PAPOLAP51003 745 aaKnown RBP11.03□□□□□ -0.64
RNF4-212ENST00000509258 ERVPABLB-1P60509 514 aa11.03□□□□□ -0.64
RNF4-212ENST00000509258 SNRPD1P62314 119 aaKnown RBP11.03□□□□□ -0.64
RNF4-212ENST00000509258 FANCCQ00597 558 aa11.03□□□□□ -0.64
RNF4-212ENST00000509258 RAD51Q06609 339 aa11.03□□□□□ -0.64
RNF4-212ENST00000509258 EIF2B5Q13144 721 aaKnown RBP11.03□□□□□ -0.64
RNF4-212ENST00000509258 KCTD16Q68DU8 428 aa11.03□□□□□ -0.64
RNF4-212ENST00000509258 ZCCHC8Q6NZY4 707 aaKnown RBP11.03□□□□□ -0.64
RNF4-212ENST00000509258 GDPD4Q6W3E5 623 aa11.03□□□□□ -0.64
RNF4-212ENST00000509258 ZNF354CQ86Y25 554 aa11.03□□□□□ -0.64
RNF4-212ENST00000509258 DENND6BQ8NEG7 585 aa11.03□□□□□ -0.64
RNF4-212ENST00000509258 ZNF548Q8NEK5 533 aaPredicted RBP11.03□□□□□ -0.64
RNF4-212ENST00000509258 BTN2A2Q8WVV5 523 aa11.03□□□□□ -0.64
RNF4-212ENST00000509258 GLMNQ92990 594 aa11.03□□□□□ -0.64
RNF4-212ENST00000509258 ZNF653Q96CK0 615 aa11.03□□□□□ -0.64
RNF4-212ENST00000509258 EPAS1Q99814 870 aa11.03□□□□□ -0.64
RNF4-212ENST00000509258 C1QTNF7Q9BXJ2 289 aa11.03□□□□□ -0.64
RNF4-212ENST00000509258 OSBPL1AQ9BXW6 950 aa11.03□□□□□ -0.64
RNF4-212ENST00000509258 POLR1BQ9H9Y6 1135 aa11.03□□□□□ -0.64
RNF4-212ENST00000509258 MBNL1Q9NR56 388 aaKnown RBP11.03□□□□□ -0.64
RNF4-212ENST00000509258 THSD1Q9NS62 852 aa11.03□□□□□ -0.64
RNF4-212ENST00000509258 PARVAQ9NVD7 372 aa11.03□□□□□ -0.64
RNF4-212ENST00000509258 ETNK2Q9NVF9 386 aa11.03□□□□□ -0.64
RNF4-212ENST00000509258 MYO1AQ9UBC5 1043 aa11.03□□□□□ -0.64
RNF4-212ENST00000509258 MGAQ8IWI9 3026 aa11.02□□□□□ -0.65
RNF4-212ENST00000509258 SPTY2D1-AS1A0A0U1RR47 76 aa11.02□□□□□ -0.65
RNF4-212ENST00000509258 ZSCAN5CA6NGD5 496 aaPredicted RBP11.02□□□□□ -0.65
RNF4-212ENST00000509258 K7ESM1 405 aa11.02□□□□□ -0.65
RNF4-212ENST00000509258 EEF2KO00418 725 aaKnown RBP11.02□□□□□ -0.65
RNF4-212ENST00000509258 TSPAN6O43657 245 aa11.02□□□□□ -0.65
RNF4-212ENST00000509258 LZTS3O60299 673 aaPredicted RBP11.02□□□□□ -0.65
RNF4-212ENST00000509258 POP4O95707 220 aaKnown RBP11.02□□□□□ -0.65
RNF4-212ENST00000509258 CSF2P04141 144 aa11.02□□□□□ -0.65
RNF4-212ENST00000509258 CELA2BP08218 269 aaPredicted RBP11.02□□□□□ -0.65
RNF4-212ENST00000509258 GZMAP12544 262 aa11.02□□□□□ -0.65
RNF4-212ENST00000509258 ERCC2P18074 760 aa11.02□□□□□ -0.65
RNF4-212ENST00000509258 LSSP48449 732 aa11.02□□□□□ -0.65
RNF4-212ENST00000509258 YBEYP58557 167 aaPredicted RBP11.02□□□□□ -0.65
RNF4-212ENST00000509258 PFN3P60673 137 aa11.02□□□□□ -0.65
RNF4-212ENST00000509258 RHOAP61586 193 aa11.02□□□□□ -0.65
RNF4-212ENST00000509258 KLHL30Q0D2K2 578 aa11.02□□□□□ -0.65
RNF4-212ENST00000509258 DPYSQ14117 519 aa11.02□□□□□ -0.65
RNF4-212ENST00000509258 PTK2BQ14289 1009 aa11.02□□□□□ -0.65
RNF4-212ENST00000509258 SMTNL2Q2TAL5 461 aa11.02□□□□□ -0.65
RNF4-212ENST00000509258 KLHL40Q2TBA0 621 aa11.02□□□□□ -0.65
RNF4-212ENST00000509258 PARP15Q460N3 678 aa11.02□□□□□ -0.65
RNF4-212ENST00000509258 RFX8Q6ZV50 586 aa11.02□□□□□ -0.65
RNF4-212ENST00000509258 RBFAQ8N0V3 343 aa11.02□□□□□ -0.65
RNF4-212ENST00000509258 ZNF843Q8N446 348 aa11.02□□□□□ -0.65
RNF4-212ENST00000509258 TP53I13Q8NBR0 393 aaPredicted RBP11.02□□□□□ -0.65
RNF4-212ENST00000509258 TSEN2Q8NCE0 465 aaKnown RBP11.02□□□□□ -0.65
RNF4-212ENST00000509258 TPCN2Q8NHX9 752 aa11.02□□□□□ -0.65
RNF4-212ENST00000509258 IFI44Q8TCB0 444 aa11.02□□□□□ -0.65
RNF4-212ENST00000509258 MAPK15Q8TD08 544 aa11.02□□□□□ -0.65
RNF4-212ENST00000509258 KCNE4Q8WWG9 221 aa11.02□□□□□ -0.65
RNF4-212ENST00000509258 COL26A1Q96A83 441 aa11.02□□□□□ -0.65
RNF4-212ENST00000509258 CENPTQ96BT3 561 aa11.02□□□□□ -0.65
RNF4-212ENST00000509258 GRAMD1AQ96CP6 724 aa11.02□□□□□ -0.65
RNF4-212ENST00000509258 NAF1Q96HR8 494 aaKnown RBP11.02□□□□□ -0.65
RNF4-212ENST00000509258 GDAP1L1Q96MZ0 367 aa11.02□□□□□ -0.65
RNF4-212ENST00000509258 WRAP53Q9BUR4 548 aaKnown RBP11.02□□□□□ -0.65
RNF4-212ENST00000509258 ISCUQ9H1K1 167 aa11.02□□□□□ -0.65
RNF4-212ENST00000509258 CATSPERBQ9H7T0 1116 aa11.02□□□□□ -0.65
RNF4-212ENST00000509258 DONSONQ9NYP3 566 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms