RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 GJC1P36383 396 aa18.83■□□□□ 0.6
UBE3D-207ENST00000509102 PDE1CQ14123 709 aaPredicted RBP18.83■□□□□ 0.6
UBE3D-207ENST00000509102 FGL2Q14314 439 aa18.83■□□□□ 0.6
UBE3D-207ENST00000509102 LRRC49Q8IUZ0 686 aa18.83■□□□□ 0.6
UBE3D-207ENST00000509102 KCTD6Q8NC69 237 aa18.83■□□□□ 0.6
UBE3D-207ENST00000509102 GATA6Q92908 595 aa18.83■□□□□ 0.6
UBE3D-207ENST00000509102 BMFQ96LC9 184 aa18.83■□□□□ 0.6
UBE3D-207ENST00000509102 PSKH2Q96QS6 385 aa18.83■□□□□ 0.6
UBE3D-207ENST00000509102 EVA1BQ9NVM1 165 aa18.83■□□□□ 0.6
UBE3D-207ENST00000509102 HAUS2Q9NVX0 235 aa18.83■□□□□ 0.6
UBE3D-207ENST00000509102 MAP1BP46821 2468 aaKnown RBP18.83■□□□□ 0.6
UBE3D-207ENST00000509102 COL5A1P20908 1838 aaPredicted RBP18.83■□□□□ 0.6
UBE3D-207ENST00000509102 DOCK9Q9BZ29 2069 aa18.82■□□□□ 0.6
UBE3D-207ENST00000509102 SPTY2D1-AS1A0A0U1RR47 76 aa18.82■□□□□ 0.6
UBE3D-207ENST00000509102 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.82■□□□□ 0.6
UBE3D-207ENST00000509102 A0A1W2PQ67 120 aa18.82■□□□□ 0.6
UBE3D-207ENST00000509102 TSPAN11A1L157 253 aa18.82■□□□□ 0.6
UBE3D-207ENST00000509102 RAD51BO15315 384 aa18.82■□□□□ 0.6
UBE3D-207ENST00000509102 MFAP3LO75121 409 aa18.82■□□□□ 0.6
UBE3D-207ENST00000509102 RFPL3O75679 317 aa18.82■□□□□ 0.6
UBE3D-207ENST00000509102 PROSCO94903 275 aa18.82■□□□□ 0.6
UBE3D-207ENST00000509102 DKK1O94907 266 aa18.82■□□□□ 0.6
UBE3D-207ENST00000509102 TMEM253P0C7T8 217 aa18.82■□□□□ 0.6
UBE3D-207ENST00000509102 DGKAP23743 735 aa18.82■□□□□ 0.6
UBE3D-207ENST00000509102 SCNN1BP51168 640 aa18.82■□□□□ 0.6
UBE3D-207ENST00000509102 ILKQ13418 452 aa18.82■□□□□ 0.6
UBE3D-207ENST00000509102 TMEM52BQ4KMG9 183 aa18.82■□□□□ 0.6
UBE3D-207ENST00000509102 ARHGAP36Q6ZRI8 547 aa18.82■□□□□ 0.6
UBE3D-207ENST00000509102 TMPRSS7Q7RTY8 843 aa18.82■□□□□ 0.6
UBE3D-207ENST00000509102 CAMK1DQ8IU85 385 aa18.82■□□□□ 0.6
UBE3D-207ENST00000509102 SLC22A18ASQ8N1D0 253 aa18.82■□□□□ 0.6
UBE3D-207ENST00000509102 KLF6Q99612 283 aaPredicted RBP18.82■□□□□ 0.6
UBE3D-207ENST00000509102 PCDH12Q9NPG4 1184 aa18.82■□□□□ 0.6
UBE3D-207ENST00000509102 ATP8A1Q9Y2Q0 1164 aa18.82■□□□□ 0.6
UBE3D-207ENST00000509102 SPINT1O43278 529 aa18.81■□□□□ 0.6
UBE3D-207ENST00000509102 LZTS3O60299 673 aaPredicted RBP18.81■□□□□ 0.6
UBE3D-207ENST00000509102 PIAS2O75928 621 aa18.81■□□□□ 0.6
UBE3D-207ENST00000509102 CKMT2P17540 419 aa18.81■□□□□ 0.6
UBE3D-207ENST00000509102 HNF1BP35680 557 aa18.81■□□□□ 0.6
UBE3D-207ENST00000509102 YPEL5P62699 121 aa18.81■□□□□ 0.6
UBE3D-207ENST00000509102 DAB2P98082 770 aa18.81■□□□□ 0.6
UBE3D-207ENST00000509102 ZNF211Q13398 564 aaPredicted RBP18.81■□□□□ 0.6
UBE3D-207ENST00000509102 PDK2Q15119 407 aa18.81■□□□□ 0.6
UBE3D-207ENST00000509102 TXNRD3NBQ6F5E7 133 aa18.81■□□□□ 0.6
UBE3D-207ENST00000509102 KDF1Q8NAX2 398 aaPredicted RBP18.81■□□□□ 0.6
UBE3D-207ENST00000509102 BTN2A2Q8WVV5 523 aa18.81■□□□□ 0.6
UBE3D-207ENST00000509102 ZCCHC14Q8WYQ9 949 aaKnown RBP18.81■□□□□ 0.6
UBE3D-207ENST00000509102 VOPP1Q96AW1 172 aa18.81■□□□□ 0.6
UBE3D-207ENST00000509102 DUSP23Q9BVJ7 150 aa18.81■□□□□ 0.6
UBE3D-207ENST00000509102 GPR27Q9NS67 375 aa18.81■□□□□ 0.6
UBE3D-207ENST00000509102 NENFQ9UMX5 172 aa18.81■□□□□ 0.6
UBE3D-207ENST00000509102 AKR1B15C9JRZ8 316 aaPredicted RBP18.8■□□□□ 0.6
UBE3D-207ENST00000509102 RIOK3O14730 519 aaKnown RBP18.8■□□□□ 0.6
UBE3D-207ENST00000509102 FFAR2O15552 330 aa18.8■□□□□ 0.6
UBE3D-207ENST00000509102 BUB1BO60566 1050 aaPredicted RBP18.8■□□□□ 0.6
UBE3D-207ENST00000509102 CSF2P04141 144 aa18.8■□□□□ 0.6
UBE3D-207ENST00000509102 NME1P15531 152 aaKnown RBP18.8■□□□□ 0.6
UBE3D-207ENST00000509102 MAN1A1P33908 653 aa18.8■□□□□ 0.6
UBE3D-207ENST00000509102 RGRP47804 291 aa18.8■□□□□ 0.6
UBE3D-207ENST00000509102 ADKP55263 362 aaKnown RBP18.8■□□□□ 0.6
UBE3D-207ENST00000509102 PFN3P60673 137 aa18.8■□□□□ 0.6
UBE3D-207ENST00000509102 SLC10A7Q0GE19 358 aa18.8■□□□□ 0.6
UBE3D-207ENST00000509102 DNAJC3Q13217 504 aa18.8■□□□□ 0.6
UBE3D-207ENST00000509102 LRRC14Q15048 493 aa18.8■□□□□ 0.6
UBE3D-207ENST00000509102 MARC1Q5VT66 337 aa18.8■□□□□ 0.6
UBE3D-207ENST00000509102 DHRS13Q6UX07 377 aa18.8■□□□□ 0.6
UBE3D-207ENST00000509102 CCNI2Q6ZMN8 369 aaPredicted RBP18.8■□□□□ 0.6
UBE3D-207ENST00000509102 KANSL1Q7Z3B3 1105 aa18.8■□□□□ 0.6
UBE3D-207ENST00000509102 TMPRSS12Q86WS5 348 aa18.8■□□□□ 0.6
UBE3D-207ENST00000509102 OR4C6Q8NH72 309 aa18.8■□□□□ 0.6
UBE3D-207ENST00000509102 CENPTQ96BT3 561 aa18.8■□□□□ 0.6
UBE3D-207ENST00000509102 ZNF670Q9BS34 389 aa18.8■□□□□ 0.6
UBE3D-207ENST00000509102 TRIM5Q9C035 493 aa18.8■□□□□ 0.6
UBE3D-207ENST00000509102 NHEJ1Q9H9Q4 299 aaPredicted RBP18.8■□□□□ 0.6
UBE3D-207ENST00000509102 SCUBE2Q9NQ36 999 aa18.8■□□□□ 0.6
UBE3D-207ENST00000509102 ETNK2Q9NVF9 386 aa18.8■□□□□ 0.6
UBE3D-207ENST00000509102 NLGN3Q9NZ94 848 aa18.8■□□□□ 0.6
UBE3D-207ENST00000509102 TMEM110-MUSTN1A8MSY1 372 aa18.79■□□□□ 0.6
UBE3D-207ENST00000509102 MAFKO60675 156 aa18.79■□□□□ 0.6
UBE3D-207ENST00000509102 SOCS5O75159 536 aa18.79■□□□□ 0.6
UBE3D-207ENST00000509102 NEBLO76041 1014 aa18.79■□□□□ 0.6
UBE3D-207ENST00000509102 C6P13671 934 aa18.79■□□□□ 0.6
UBE3D-207ENST00000509102 HTR1BP28222 390 aa18.79■□□□□ 0.6
UBE3D-207ENST00000509102 MMP12P39900 470 aa18.79■□□□□ 0.6
UBE3D-207ENST00000509102 MMP13P45452 471 aa18.79■□□□□ 0.6
UBE3D-207ENST00000509102 ACADVLP49748 655 aa18.79■□□□□ 0.6
UBE3D-207ENST00000509102 LIG3P49916 1009 aa18.79■□□□□ 0.6
UBE3D-207ENST00000509102 FZD2Q14332 565 aa18.79■□□□□ 0.6
UBE3D-207ENST00000509102 SMAD1Q15797 465 aaKnown RBP18.79■□□□□ 0.6
UBE3D-207ENST00000509102 ASTE1Q2TB18 679 aaPredicted RBP18.79■□□□□ 0.6
UBE3D-207ENST00000509102 ODF2Q5BJF6 829 aa18.79■□□□□ 0.6
UBE3D-207ENST00000509102 ZNF542PQ5EBM4 170 aa18.79■□□□□ 0.6
UBE3D-207ENST00000509102 RALGPS1Q5JS13 557 aa18.79■□□□□ 0.6
UBE3D-207ENST00000509102 TIGD7Q6NT04 549 aaPredicted RBP18.79■□□□□ 0.6
UBE3D-207ENST00000509102 RHOT2Q8IXI1 618 aa18.79■□□□□ 0.6
UBE3D-207ENST00000509102 SLC25A45Q8N413 288 aa18.79■□□□□ 0.6
UBE3D-207ENST00000509102 ATL2Q8NHH9 583 aa18.79■□□□□ 0.6
UBE3D-207ENST00000509102 FAM71BQ8TC56 605 aa18.79■□□□□ 0.6
UBE3D-207ENST00000509102 TSC1Q92574 1164 aa18.79■□□□□ 0.6
UBE3D-207ENST00000509102 TMEM121BQ9BXQ6 578 aaPredicted RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms