RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 MYF5P13349 255 aa14.95□□□□□ -0.02
UBE2D3-228ENST00000508974 RABIFP47224 123 aa14.95□□□□□ -0.02
UBE2D3-228ENST00000508974 HCAR3P49019 387 aa14.95□□□□□ -0.02
UBE2D3-228ENST00000508974 DAB2P98082 770 aa14.95□□□□□ -0.02
UBE2D3-228ENST00000508974 IL10RBQ08334 325 aa14.95□□□□□ -0.02
UBE2D3-228ENST00000508974 SLC10A7Q0GE19 358 aa14.95□□□□□ -0.02
UBE2D3-228ENST00000508974 MMRN1Q13201 1228 aa14.95□□□□□ -0.02
UBE2D3-228ENST00000508974 BOLA3Q53S33 107 aa14.95□□□□□ -0.02
UBE2D3-228ENST00000508974 SPECC1LQ69YQ0 1117 aa14.95□□□□□ -0.02
UBE2D3-228ENST00000508974 POLNQ7Z5Q5 900 aa14.95□□□□□ -0.02
UBE2D3-228ENST00000508974 GALNT15Q8N3T1 639 aa14.95□□□□□ -0.02
UBE2D3-228ENST00000508974 MDM1Q8TC05 714 aa14.95□□□□□ -0.02
UBE2D3-228ENST00000508974 DEF6Q9H4E7 631 aa14.95□□□□□ -0.02
UBE2D3-228ENST00000508974 ATP13A3Q9H7F0 1226 aa14.95□□□□□ -0.02
UBE2D3-228ENST00000508974 PCDH12Q9NPG4 1184 aa14.95□□□□□ -0.02
UBE2D3-228ENST00000508974 MBNL1Q9NR56 388 aaKnown RBP14.95□□□□□ -0.02
UBE2D3-228ENST00000508974 DKK3Q9UBP4 350 aa14.95□□□□□ -0.02
UBE2D3-228ENST00000508974 ZZEF1O43149 2961 aa14.95□□□□□ -0.02
UBE2D3-228ENST00000508974 ZFHX4Q86UP3 3567 aa14.95□□□□□ -0.02
UBE2D3-228ENST00000508974 SPTY2D1-AS1A0A0U1RR47 76 aa14.94□□□□□ -0.02
UBE2D3-228ENST00000508974 TMEM110-MUSTN1A8MSY1 372 aa14.94□□□□□ -0.02
UBE2D3-228ENST00000508974 A8MX80 341 aa14.94□□□□□ -0.02
UBE2D3-228ENST00000508974 MYO1FO00160 1098 aa14.94□□□□□ -0.02
UBE2D3-228ENST00000508974 CD48P09326 243 aa14.94□□□□□ -0.02
UBE2D3-228ENST00000508974 SERPINA4P29622 427 aa14.94□□□□□ -0.02
UBE2D3-228ENST00000508974 SCNN1BP51168 640 aa14.94□□□□□ -0.02
UBE2D3-228ENST00000508974 THOP1P52888 689 aa14.94□□□□□ -0.02
UBE2D3-228ENST00000508974 CDH6P55285 790 aa14.94□□□□□ -0.02
UBE2D3-228ENST00000508974 ELP6Q0PNE2 266 aa14.94□□□□□ -0.02
UBE2D3-228ENST00000508974 ZNF235Q14590 738 aa14.94□□□□□ -0.02
UBE2D3-228ENST00000508974 LBRQ14739 615 aaKnown RBP14.94□□□□□ -0.02
UBE2D3-228ENST00000508974 UGP2Q16851 508 aa14.94□□□□□ -0.02
UBE2D3-228ENST00000508974 ATP13A4Q4VNC1 1196 aa14.94□□□□□ -0.02
UBE2D3-228ENST00000508974 HS1BP3Q53T59 392 aa14.94□□□□□ -0.02
UBE2D3-228ENST00000508974 ZSCAN30Q86W11 494 aa14.94□□□□□ -0.02
UBE2D3-228ENST00000508974 PARGQ86W56 976 aa14.94□□□□□ -0.02
UBE2D3-228ENST00000508974 NIPA2Q8N8Q9 360 aa14.94□□□□□ -0.02
UBE2D3-228ENST00000508974 CENPTQ96BT3 561 aa14.94□□□□□ -0.02
UBE2D3-228ENST00000508974 LENG8Q96PV6 779 aaPredicted RBP14.94□□□□□ -0.02
UBE2D3-228ENST00000508974 GPR27Q9NS67 375 aa14.94□□□□□ -0.02
UBE2D3-228ENST00000508974 KLF15Q9UIH9 416 aa14.94□□□□□ -0.02
UBE2D3-228ENST00000508974 GOLGA4Q13439 2230 aaKnown RBP14.94□□□□□ -0.02
UBE2D3-228ENST00000508974 TSPAN11A1L157 253 aa14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 SRRM3A6NNA2 597 aaPredicted RBP14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 C6P13671 934 aa14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 JUNDP17535 347 aa14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 CKMT2P17540 419 aa14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 LIG3P49916 1009 aa14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 ZNF135P52742 658 aaPredicted RBP14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 ADKP55263 362 aaKnown RBP14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 PFN3P60673 137 aa14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 HNRNPKP61978 463 aaKnown RBP eCLIP14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 BCL2L1Q07817 233 aa14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 GRM3Q14832 879 aa14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 IRF4Q15306 451 aa14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 TCEA2Q15560 299 aa14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 SMAD1Q15797 465 aaKnown RBP14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 PROX2Q3B8N5 592 aa14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 TMEM52BQ4KMG9 183 aa14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 TMCO4Q5TGY1 634 aa14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 ERAP2Q6P179 960 aa14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 DCP2Q8IU60 420 aaKnown RBP14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 RBFAQ8N0V3 343 aa14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 ATPAF2Q8N5M1 289 aa14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 LZTR1Q8N653 840 aa14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 TP53I13Q8NBR0 393 aaPredicted RBP14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 DENND6BQ8NEG7 585 aa14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 ZNF548Q8NEK5 533 aaPredicted RBP14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 OR8K1Q8NGG5 319 aa14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 OR4C6Q8NH72 309 aa14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 FAM174AQ8TBP5 190 aa14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 LMX1AQ8TE12 382 aa14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 PDCD6IPQ8WUM4 868 aaKnown RBP14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 TEKT4Q8WW24 435 aa14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 CTNNBL1Q8WYA6 563 aaPredicted RBP14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 TSC1Q92574 1164 aa14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 NSMCE3Q96MG7 304 aa14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 ZNF641Q96N77 438 aaPredicted RBP14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 TUBGCP5Q96RT8 1024 aa14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 TCEAL2Q9H3H9 227 aaPredicted RBP14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 SEPT3Q9UH03 358 aa14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 RALYQ9UKM9 306 aaKnown RBP14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 NENFQ9UMX5 172 aa14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 ATP8A1Q9Y2Q0 1164 aa14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 LRP4O75096 1905 aa14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 DMXL2Q8TDJ6 3036 aa14.93□□□□□ -0.02
UBE2D3-228ENST00000508974 H3BM21 787 aa14.92□□□□□ -0.02
UBE2D3-228ENST00000508974 RIOK3O14730 519 aaKnown RBP14.92□□□□□ -0.02
UBE2D3-228ENST00000508974 SCAMP1O15126 338 aa14.92□□□□□ -0.02
UBE2D3-228ENST00000508974 AKR1B10O60218 316 aa14.92□□□□□ -0.02
UBE2D3-228ENST00000508974 LZTS3O60299 673 aaPredicted RBP14.92□□□□□ -0.02
UBE2D3-228ENST00000508974 MAP3K6O95382 1288 aa14.92□□□□□ -0.02
UBE2D3-228ENST00000508974 CSF2P04141 144 aa14.92□□□□□ -0.02
UBE2D3-228ENST00000508974 GIMD1P0DJR0 217 aa14.92□□□□□ -0.02
UBE2D3-228ENST00000508974 ALPPL2P10696 532 aa14.92□□□□□ -0.02
UBE2D3-228ENST00000508974 JUPP14923 745 aa14.92□□□□□ -0.02
UBE2D3-228ENST00000508974 HNRNPH3P31942 346 aaKnown RBP14.92□□□□□ -0.02
UBE2D3-228ENST00000508974 MMP12P39900 470 aa14.92□□□□□ -0.02
UBE2D3-228ENST00000508974 MAXP61244 160 aa14.92□□□□□ -0.02
UBE2D3-228ENST00000508974 EIF2B5Q13144 721 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms