RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 GNA12Q03113 381 aa9.51□□□□□ -0.89
NEDD9-211ENST00000508546 ALG11Q2TAA5 492 aa9.51□□□□□ -0.89
NEDD9-211ENST00000508546 SMYD5Q6GMV2 418 aa9.51□□□□□ -0.89
NEDD9-211ENST00000508546 FOXR2Q6PJQ5 311 aa9.51□□□□□ -0.89
NEDD9-211ENST00000508546 TICAM1Q8IUC6 712 aa9.51□□□□□ -0.89
NEDD9-211ENST00000508546 ZDHHC17Q8IUH5 632 aa9.51□□□□□ -0.89
NEDD9-211ENST00000508546 TRIM59Q8IWR1 403 aa9.51□□□□□ -0.89
NEDD9-211ENST00000508546 C1orf131Q8NDD1 294 aaKnown RBP9.51□□□□□ -0.89
NEDD9-211ENST00000508546 USP7Q93009 1102 aa9.51□□□□□ -0.89
NEDD9-211ENST00000508546 DHTKD1Q96HY7 919 aaPredicted RBP9.51□□□□□ -0.89
NEDD9-211ENST00000508546 FAM81BQ96LP2 452 aa9.51□□□□□ -0.89
NEDD9-211ENST00000508546 EPAS1Q99814 870 aa9.51□□□□□ -0.89
NEDD9-211ENST00000508546 SLC12A9Q9BXP2 914 aa9.51□□□□□ -0.89
NEDD9-211ENST00000508546 TM6SF2Q9BZW4 377 aa9.51□□□□□ -0.89
NEDD9-211ENST00000508546 SCAND2PQ9GZW5 306 aaPredicted RBP9.51□□□□□ -0.89
NEDD9-211ENST00000508546 INTS2Q9H0H0 1204 aaKnown RBP9.51□□□□□ -0.89
NEDD9-211ENST00000508546 MBNL1Q9NR56 388 aaKnown RBP9.51□□□□□ -0.89
NEDD9-211ENST00000508546 FOXJ2Q9P0K8 574 aa9.51□□□□□ -0.89
NEDD9-211ENST00000508546 SIRPGQ9P1W8 387 aa9.51□□□□□ -0.89
NEDD9-211ENST00000508546 ANAPC2Q9UJX6 822 aa9.51□□□□□ -0.89
NEDD9-211ENST00000508546 STAP1Q9ULZ2 295 aa9.51□□□□□ -0.89
NEDD9-211ENST00000508546 SNX10Q9Y5X0 201 aa9.51□□□□□ -0.89
NEDD9-211ENST00000508546 DNHD1Q96M86 4753 aa9.51□□□□□ -0.89
NEDD9-211ENST00000508546 CELSR1Q9NYQ6 3014 aa9.5□□□□□ -0.89
NEDD9-211ENST00000508546 BECN2A8MW95 431 aa9.5□□□□□ -0.89
NEDD9-211ENST00000508546 GSRP00390 522 aa9.5□□□□□ -0.89
NEDD9-211ENST00000508546 ERBB2P04626 1255 aa9.5□□□□□ -0.89
NEDD9-211ENST00000508546 UGT2B4P06133 528 aa9.5□□□□□ -0.89
NEDD9-211ENST00000508546 TFE3P19532 575 aaPredicted RBP9.5□□□□□ -0.89
NEDD9-211ENST00000508546 GKP32189 559 aa9.5□□□□□ -0.89
NEDD9-211ENST00000508546 ETFBP38117 255 aa9.5□□□□□ -0.89
NEDD9-211ENST00000508546 PPP1R2P41236 205 aa9.5□□□□□ -0.89
NEDD9-211ENST00000508546 MARSP56192 900 aaKnown RBP9.5□□□□□ -0.89
NEDD9-211ENST00000508546 GEMIN4P57678 1058 aaKnown RBP9.5□□□□□ -0.89
NEDD9-211ENST00000508546 SNRPD1P62314 119 aaKnown RBP9.5□□□□□ -0.89
NEDD9-211ENST00000508546 DEUP1Q05D60 604 aa9.5□□□□□ -0.89
NEDD9-211ENST00000508546 STIM1Q13586 685 aa9.5□□□□□ -0.89
NEDD9-211ENST00000508546 POLD3Q15054 466 aaPredicted RBP9.5□□□□□ -0.89
NEDD9-211ENST00000508546 KLHL40Q2TBA0 621 aa9.5□□□□□ -0.89
NEDD9-211ENST00000508546 KRTAP21-3Q3LHN1 58 aa9.5□□□□□ -0.89
NEDD9-211ENST00000508546 PTPN20Q4JDL3 420 aa9.5□□□□□ -0.89
NEDD9-211ENST00000508546 CERCAMQ5T4B2 595 aa9.5□□□□□ -0.89
NEDD9-211ENST00000508546 TMEM164Q5U3C3 297 aa9.5□□□□□ -0.89
NEDD9-211ENST00000508546 TTI2Q6NXR4 508 aa9.5□□□□□ -0.89
NEDD9-211ENST00000508546 BORAQ6PGQ7 559 aa9.5□□□□□ -0.89
NEDD9-211ENST00000508546 OGFOD3Q6PK18 319 aa9.5□□□□□ -0.89
NEDD9-211ENST00000508546 HID1Q8IV36 788 aa9.5□□□□□ -0.89
NEDD9-211ENST00000508546 SLITRK4Q8IW52 837 aa9.5□□□□□ -0.89
NEDD9-211ENST00000508546 OR2AP1Q8NGE2 309 aa9.5□□□□□ -0.89
NEDD9-211ENST00000508546 OR6K2Q8NGY2 324 aa9.5□□□□□ -0.89
NEDD9-211ENST00000508546 CXorf40AQ8TE69 158 aa9.5□□□□□ -0.89
NEDD9-211ENST00000508546 ARHGEF2Q92974 986 aaKnown RBP9.5□□□□□ -0.89
NEDD9-211ENST00000508546 TSACCQ96A04 125 aaPredicted RBP9.5□□□□□ -0.89
NEDD9-211ENST00000508546 HAPLN3Q96S86 360 aa9.5□□□□□ -0.89
NEDD9-211ENST00000508546 RBM15Q96T37 977 aaKnown RBP eCLIP9.5□□□□□ -0.892e-6■■■■■ 33.2
NEDD9-211ENST00000508546 ZYG11BQ9C0D3 744 aa9.5□□□□□ -0.89
NEDD9-211ENST00000508546 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.5□□□□□ -0.89
NEDD9-211ENST00000508546 PPARGC1AQ9UBK2 798 aaKnown RBP9.5□□□□□ -0.89
NEDD9-211ENST00000508546 ACTL7AQ9Y615 435 aa9.5□□□□□ -0.89
NEDD9-211ENST00000508546 A1L4Q6 167 aa9.49□□□□□ -0.89
NEDD9-211ENST00000508546 STMND1H3BQB6 276 aa9.49□□□□□ -0.89
NEDD9-211ENST00000508546 KRIT1O00522 736 aa9.49□□□□□ -0.89
NEDD9-211ENST00000508546 MMP20O60882 483 aa9.49□□□□□ -0.89
NEDD9-211ENST00000508546 SRGAP2O75044 1071 aa9.49□□□□□ -0.89
NEDD9-211ENST00000508546 SMC2O95347 1197 aa9.49□□□□□ -0.89
NEDD9-211ENST00000508546 HTR1BP28222 390 aa9.49□□□□□ -0.89
NEDD9-211ENST00000508546 SCNN1AP37088 669 aa9.49□□□□□ -0.89
NEDD9-211ENST00000508546 SULT1E1P49888 294 aa9.49□□□□□ -0.89
NEDD9-211ENST00000508546 SUOXP51687 545 aa9.49□□□□□ -0.89
NEDD9-211ENST00000508546 MAPK10P53779 464 aa9.49□□□□□ -0.89
NEDD9-211ENST00000508546 POLE2P56282 527 aa9.49□□□□□ -0.89
NEDD9-211ENST00000508546 SRP54P61011 504 aaKnown RBP9.49□□□□□ -0.89
NEDD9-211ENST00000508546 KCNAB2Q13303 367 aa9.49□□□□□ -0.89
NEDD9-211ENST00000508546 NFATC4Q14934 902 aa9.49□□□□□ -0.89
NEDD9-211ENST00000508546 NCAPHQ15003 741 aa9.49□□□□□ -0.89
NEDD9-211ENST00000508546 IRF4Q15306 451 aa9.49□□□□□ -0.89
NEDD9-211ENST00000508546 MYLK3Q32MK0 819 aa9.49□□□□□ -0.89
NEDD9-211ENST00000508546 SLC25A52Q3SY17 297 aa9.49□□□□□ -0.89
NEDD9-211ENST00000508546 ENPP7Q6UWV6 458 aa9.49□□□□□ -0.89
NEDD9-211ENST00000508546 SPRED1Q7Z699 444 aa9.49□□□□□ -0.89
NEDD9-211ENST00000508546 TTC7BQ86TV6 843 aa9.49□□□□□ -0.89
NEDD9-211ENST00000508546 PASD1Q8IV76 773 aa9.49□□□□□ -0.89
NEDD9-211ENST00000508546 FMR1NBQ8N0W7 255 aaPredicted RBP9.49□□□□□ -0.89
NEDD9-211ENST00000508546 RYBPQ8N488 228 aaPredicted RBP9.49□□□□□ -0.89
NEDD9-211ENST00000508546 ATL2Q8NHH9 583 aa9.49□□□□□ -0.89
NEDD9-211ENST00000508546 GPBAR1Q8TDU6 330 aa9.49□□□□□ -0.89
NEDD9-211ENST00000508546 SHC3Q92529 594 aa9.49□□□□□ -0.89
NEDD9-211ENST00000508546 SMARCE1Q969G3 411 aa9.49□□□□□ -0.89
NEDD9-211ENST00000508546 KLHL32Q96NJ5 620 aa9.49□□□□□ -0.89
NEDD9-211ENST00000508546 CDH19Q9H159 772 aa9.49□□□□□ -0.89
NEDD9-211ENST00000508546 RETREG1Q9H6L5 497 aa9.49□□□□□ -0.89
NEDD9-211ENST00000508546 TMPRSS4Q9NRS4 437 aa9.49□□□□□ -0.89
NEDD9-211ENST00000508546 DKK3Q9UBP4 350 aa9.49□□□□□ -0.89
NEDD9-211ENST00000508546 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.49□□□□□ -0.89
NEDD9-211ENST00000508546 DGKBQ9Y6T7 804 aa9.49□□□□□ -0.89
NEDD9-211ENST00000508546 RNF215Q9Y6U7 377 aa9.49□□□□□ -0.89
NEDD9-211ENST00000508546 PCNX1Q96RV3 2341 aa9.49□□□□□ -0.89
NEDD9-211ENST00000508546 MTORP42345 2549 aa9.48□□□□□ -0.89
NEDD9-211ENST00000508546 NUDT21O43809 227 aaKnown RBP9.48□□□□□ -0.89
NEDD9-211ENST00000508546 GNA14O95837 355 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms