RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 SAMSN1Q9NSI8 373 aaKnown RBP4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 INTS9Q9NV88 658 aaKnown RBP4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 PANK4Q9NVE7 773 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 PLK2Q9NYY3 685 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 ADAM22Q9P0K1 906 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 CPA4Q9UI42 421 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 CNOT7Q9UIV1 285 aaKnown RBP4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 RWDD2AQ9UIY3 292 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 HACL1Q9UJ83 578 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 CAPN11Q9UMQ6 739 aa4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.73□□□□□ -1.65
PDLIM5-211ENST00000508531 ATP8B3O60423 1300 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 MEGF6O75095 1541 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 DLG5Q8TDM6 1919 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 HTR3EA5X5Y0 456 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 TRAFD1O14545 582 aaPredicted RBP4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 SNX3O60493 162 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 JAK2O60674 1132 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 LCA5LO95447 670 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 GAS8O95995 478 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 ALDH2P05091 517 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 CSF1RP07333 972 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 HOXB7P09629 217 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 TPBGLP0DKB5 382 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 CYP2A6P11509 494 aaPredicted RBP4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 XBP1P17861 261 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 FPR3P25089 353 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 LRPAP1P30533 357 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 PHBP35232 272 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 LIFRP42702 1097 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 PTDSS1P48651 473 aaKnown RBP4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 ADARP55265 1226 aaKnown RBP4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 UCP3P55916 312 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 HPCAP84074 193 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 C2orf54Q08AI8 447 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 STK3Q13188 491 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 RCN2Q14257 317 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 HLTFQ14527 1009 aaKnown RBP eCLIP4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 MTF1Q14872 753 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 TTF1Q15361 905 aaPredicted RBP4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 CNPY1Q3B7I2 92 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 ZNF260Q3ZCT1 412 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 CCDC14Q49A88 953 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 CERKLQ49MI3 558 aaPredicted RBP4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 C10orf76Q5T2E6 689 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 PXDC1Q5TGL8 231 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 ARMC3Q5W041 872 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 SERPINA13PQ6UXR4 307 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 B3GNT6Q6ZMB0 384 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 PPP1R21Q6ZMI0 780 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 DPY19L3Q6ZPD9 716 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 NANOGNBQ7Z5D8 188 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 ZBTB46Q86UZ6 589 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 NUP93Q8N1F7 819 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 LINS1Q8NG48 757 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 PRSS3P2Q8NHM4 247 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 PLBD2Q8NHP8 589 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 CCDC110Q8TBZ0 833 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 ZNF398Q8TD17 642 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 OSCP1Q8WVF1 389 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 SOCS4Q8WXH5 440 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 USP6NLQ92738 828 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 SKA1Q96BD8 255 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 TLCD1Q96CP7 247 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 DGCR14Q96DF8 476 aaKnown RBP4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 CCDC42Q96M95 316 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 ZNF317Q96PQ6 595 aaPredicted RBP4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 ZNF184Q99676 751 aaPredicted RBP4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 SYT15Q9BQS2 421 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 THAP7Q9BT49 309 aaPredicted RBP4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 WACQ9BTA9 647 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 FSD1Q9BTV5 496 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 DPCDQ9BVM2 203 aaPredicted RBP4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 ROPN1BQ9BZX4 212 aaPredicted RBP4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 DRC3Q9H069 523 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 Q9H521 79 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 SYNCQ9H7C4 482 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 ROPN1Q9HAT0 212 aaPredicted RBP4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 TMEM165Q9HC07 324 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 EPB41L5Q9HCM4 733 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 PALMDQ9NP74 551 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 SAR1AQ9NR31 198 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 DDX43Q9NXZ2 648 aaKnown RBP4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 MAN1B1Q9UKM7 699 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 NFU1Q9UMS0 254 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 STXBP5LQ9Y2K9 1186 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 TMX2Q9Y320 296 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 FAM208AQ9UK61 1670 aaKnown RBP4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 C4AP0C0L4 1744 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 ZNF541Q9H0D2 1346 aa4.72□□□□□ -1.65
PDLIM5-211ENST00000508531 CD163L1Q9NR16 1453 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 H0YIN7 160 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 AREL1O15033 823 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 FYB1O15117 783 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 MAPK13O15264 365 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 RGS16O15492 202 aaPredicted RBP4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 CA12O43570 354 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 ATP2C2O75185 946 aa4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 TBCAO75347 108 aaKnown RBP4.71□□□□□ -1.66
PDLIM5-211ENST00000508531 STAM2O75886 525 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms