RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 CBX8Q9HC52 389 aa16.39■□□□□ 0.21
LMNA-222ENST00000508500 NLGN3Q9NZ94 848 aa16.39■□□□□ 0.21
LMNA-222ENST00000508500 CWC15Q9P013 229 aaKnown RBP16.39■□□□□ 0.21
LMNA-222ENST00000508500 COQ6Q9Y2Z9 468 aa16.39■□□□□ 0.21
LMNA-222ENST00000508500 PTPRQQ9UMZ3 2332 aa16.39■□□□□ 0.21
LMNA-222ENST00000508500 MUSKO15146 869 aa16.38■□□□□ 0.21
LMNA-222ENST00000508500 TM7SF2O76062 418 aa16.38■□□□□ 0.21
LMNA-222ENST00000508500 CKMT1AP12532 417 aa16.38■□□□□ 0.21
LMNA-222ENST00000508500 HNF1BP35680 557 aa16.38■□□□□ 0.21
LMNA-222ENST00000508500 HNRNPKP61978 463 aaKnown RBP eCLIP16.38■□□□□ 0.21
LMNA-222ENST00000508500 DAB2P98082 770 aa16.38■□□□□ 0.21
LMNA-222ENST00000508500 SEMG2Q02383 582 aa16.38■□□□□ 0.21
LMNA-222ENST00000508500 RAD51Q06609 339 aa16.38■□□□□ 0.21
LMNA-222ENST00000508500 FIGNQ5HY92 759 aa16.38■□□□□ 0.21
LMNA-222ENST00000508500 LUZP1Q86V48 1076 aa16.38■□□□□ 0.21
LMNA-222ENST00000508500 CAMK1DQ8IU85 385 aa16.38■□□□□ 0.21
LMNA-222ENST00000508500 RBFAQ8N0V3 343 aa16.38■□□□□ 0.21
LMNA-222ENST00000508500 CACTIN-AS1Q8N1I8 211 aa16.38■□□□□ 0.21
LMNA-222ENST00000508500 HNRNPLLQ8WVV9 542 aaKnown RBP16.38■□□□□ 0.21
LMNA-222ENST00000508500 ARHGEF26Q96DR7 871 aa16.38■□□□□ 0.21
LMNA-222ENST00000508500 SUV39H2Q9H5I1 410 aa16.38■□□□□ 0.21
LMNA-222ENST00000508500 MYO1AQ9UBC5 1043 aa16.38■□□□□ 0.21
LMNA-222ENST00000508500 UNC13CQ8NB66 2214 aa16.38■□□□□ 0.21
LMNA-222ENST00000508500 EIF3CLB5ME19 914 aaKnown RBP16.37■□□□□ 0.21
LMNA-222ENST00000508500 TLX3O43711 291 aaPredicted RBP16.37■□□□□ 0.21
LMNA-222ENST00000508500 GCATO75600 419 aa16.37■□□□□ 0.21
LMNA-222ENST00000508500 RNF8O76064 485 aa16.37■□□□□ 0.21
LMNA-222ENST00000508500 PRKCGP05129 697 aa16.37■□□□□ 0.21
LMNA-222ENST00000508500 JUNDP17535 347 aa16.37■□□□□ 0.21
LMNA-222ENST00000508500 FANCCQ00597 558 aa16.37■□□□□ 0.21
LMNA-222ENST00000508500 DPYSQ14117 519 aa16.37■□□□□ 0.21
LMNA-222ENST00000508500 RTP5Q14D33 572 aa16.37■□□□□ 0.21
LMNA-222ENST00000508500 UGP2Q16851 508 aa16.37■□□□□ 0.21
LMNA-222ENST00000508500 PPP6R3Q5H9R7 873 aaPredicted RBP16.37■□□□□ 0.21
LMNA-222ENST00000508500 CDCP2Q5VXM1 449 aa16.37■□□□□ 0.21
LMNA-222ENST00000508500 TXNRD3NBQ6F5E7 133 aa16.37■□□□□ 0.21
LMNA-222ENST00000508500 DCBLD1Q8N8Z6 715 aa16.37■□□□□ 0.21
LMNA-222ENST00000508500 FAM181AQ8N9Y4 354 aa16.37■□□□□ 0.21
LMNA-222ENST00000508500 HCAR2Q8TDS4 363 aa16.37■□□□□ 0.21
LMNA-222ENST00000508500 EIF3CQ99613 913 aaKnown RBP16.37■□□□□ 0.21
LMNA-222ENST00000508500 GRPEL1Q9HAV7 217 aa16.37■□□□□ 0.21
LMNA-222ENST00000508500 ETNK2Q9NVF9 386 aa16.37■□□□□ 0.21
LMNA-222ENST00000508500 IPO11Q9UI26 975 aaKnown RBP16.37■□□□□ 0.21
LMNA-222ENST00000508500 CLCA2Q9UQC9 943 aa16.37■□□□□ 0.21
LMNA-222ENST00000508500 KALRNO60229 2985 aa16.36■□□□□ 0.21
LMNA-222ENST00000508500 ARHGAP42A6NI28 874 aa16.36■□□□□ 0.21
LMNA-222ENST00000508500 RIOK3O14730 519 aaKnown RBP16.36■□□□□ 0.21
LMNA-222ENST00000508500 PRPSAP2O60256 369 aa16.36■□□□□ 0.21
LMNA-222ENST00000508500 SERPINC1P01008 464 aa16.36■□□□□ 0.21
LMNA-222ENST00000508500 CSNK1DP48730 415 aa16.36■□□□□ 0.21
LMNA-222ENST00000508500 HCAR3P49019 387 aa16.36■□□□□ 0.21
LMNA-222ENST00000508500 E2F1Q01094 437 aa16.36■□□□□ 0.21
LMNA-222ENST00000508500 IRF4Q15306 451 aa16.36■□□□□ 0.21
LMNA-222ENST00000508500 WSCD2Q2TBF2 565 aa16.36■□□□□ 0.21
LMNA-222ENST00000508500 SRLQ86TD4 932 aa16.36■□□□□ 0.21
LMNA-222ENST00000508500 CXorf40AQ8TE69 158 aa16.36■□□□□ 0.21
LMNA-222ENST00000508500 CRELD1Q96HD1 420 aa16.36■□□□□ 0.21
LMNA-222ENST00000508500 NRSN2Q9GZP1 204 aa16.36■□□□□ 0.21
LMNA-222ENST00000508500 CLPBQ9H078 707 aa16.36■□□□□ 0.21
LMNA-222ENST00000508500 PCDH12Q9NPG4 1184 aa16.36■□□□□ 0.21
LMNA-222ENST00000508500 CSNK1G3Q9Y6M4 447 aa16.36■□□□□ 0.21
LMNA-222ENST00000508500 ZFC3H1O60293 1989 aaKnown RBP16.35■□□□□ 0.21
LMNA-222ENST00000508500 A0A1W2PQJ5 194 aa16.35■□□□□ 0.21
LMNA-222ENST00000508500 TTC24A2A3L6 582 aaPredicted RBP16.35■□□□□ 0.21
LMNA-222ENST00000508500 NEMP2A6NFY4 417 aa16.35■□□□□ 0.21
LMNA-222ENST00000508500 DFFAO00273 331 aa16.35■□□□□ 0.21
LMNA-222ENST00000508500 CASC3O15234 703 aaKnown RBP16.35■□□□□ 0.21
LMNA-222ENST00000508500 DAPK3O43293 454 aa16.35■□□□□ 0.21
LMNA-222ENST00000508500 AQP9O43315 295 aa16.35■□□□□ 0.21
LMNA-222ENST00000508500 OPA1O60313 960 aa16.35■□□□□ 0.21
LMNA-222ENST00000508500 PALMO75781 387 aa16.35■□□□□ 0.21
LMNA-222ENST00000508500 PEX11BO96011 259 aa16.35■□□□□ 0.21
LMNA-222ENST00000508500 MT-CO3P00414 261 aa16.35■□□□□ 0.21
LMNA-222ENST00000508500 DESP17661 470 aa16.35■□□□□ 0.21
LMNA-222ENST00000508500 AMPD1P23109 780 aa16.35■□□□□ 0.21
LMNA-222ENST00000508500 EIF4A3P38919 411 aaKnown RBP16.35■□□□□ 0.21
LMNA-222ENST00000508500 YPEL5P62699 121 aa16.35■□□□□ 0.21
LMNA-222ENST00000508500 IL10RBQ08334 325 aa16.35■□□□□ 0.21
LMNA-222ENST00000508500 RALGDSQ12967 914 aa16.35■□□□□ 0.21
LMNA-222ENST00000508500 C1orf61Q13536 156 aa16.35■□□□□ 0.21
LMNA-222ENST00000508500 DPYSL2Q16555 572 aa16.35■□□□□ 0.21
LMNA-222ENST00000508500 SMTNL2Q2TAL5 461 aa16.35■□□□□ 0.21
LMNA-222ENST00000508500 DEFB133Q30KQ1 61 aa16.35■□□□□ 0.21
LMNA-222ENST00000508500 KCTD16Q68DU8 428 aa16.35■□□□□ 0.21
LMNA-222ENST00000508500 PSTKQ8IV42 348 aaKnown RBP16.35■□□□□ 0.21
LMNA-222ENST00000508500 PHACTR4Q8IZ21 702 aa16.35■□□□□ 0.21
LMNA-222ENST00000508500 LMX1AQ8TE12 382 aa16.35■□□□□ 0.21
LMNA-222ENST00000508500 FUBP1Q96AE4 644 aaKnown RBP16.35■□□□□ 0.21
LMNA-222ENST00000508500 ECHDC3Q96DC8 303 aa16.35■□□□□ 0.21
LMNA-222ENST00000508500 NXPE2Q96DL1 559 aa16.35■□□□□ 0.21
LMNA-222ENST00000508500 BTBD6Q96KE9 485 aa16.35■□□□□ 0.21
LMNA-222ENST00000508500 ZNF641Q96N77 438 aaPredicted RBP16.35■□□□□ 0.21
LMNA-222ENST00000508500 NCAPGQ9BPX3 1015 aa16.35■□□□□ 0.21
LMNA-222ENST00000508500 LRRC61Q9BV99 259 aa16.35■□□□□ 0.21
LMNA-222ENST00000508500 PCDHB1Q9Y5F3 818 aa16.35■□□□□ 0.21
LMNA-222ENST00000508500 SCINQ9Y6U3 715 aa16.35■□□□□ 0.21
LMNA-222ENST00000508500 HELZ2Q9BYK8 2649 aaKnown RBP16.35■□□□□ 0.21
LMNA-222ENST00000508500 H3BM21 787 aa16.34■□□□□ 0.21
LMNA-222ENST00000508500 TRAFD1O14545 582 aaPredicted RBP16.34■□□□□ 0.21
LMNA-222ENST00000508500 CELA2BP08218 269 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms