RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 EBF1Q9UH73 591 aa8.72□□□□□ -1.01
USP46-207ENST00000508499 SHOC2Q9UQ13 582 aa8.72□□□□□ -1.01
USP46-207ENST00000508499 CEP192Q8TEP8 1941 aa8.72□□□□□ -1.01
USP46-207ENST00000508499 FANCMQ8IYD8 2048 aa8.72□□□□□ -1.01
USP46-207ENST00000508499 TMEM221A6NGB7 291 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 C1QTNF3-AMACRE9PGA6 284 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 M0R296 226 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 SLC7A4O43246 635 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 RNASEH1O60930 286 aaKnown RBP8.71□□□□□ -1.01
USP46-207ENST00000508499 LEFTY1O75610 366 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 PGLSO95336 258 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 TUBBP07437 444 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 CTSLP07711 333 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 ETS1P14921 441 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 NFKBIAP25963 317 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 TNFRSF8P28908 595 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 MAGEA3P43357 314 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 GRIA4P48058 902 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 CCR3P51677 355 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 NRLP54845 237 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 MAXP61244 160 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 SATB1Q01826 763 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 BCL2L1Q07817 233 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 GPS1Q13098 491 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 MSLNQ13421 630 aaPredicted RBP8.71□□□□□ -1.01
USP46-207ENST00000508499 ATXN7L2Q5T6C5 722 aaPredicted RBP8.71□□□□□ -1.01
USP46-207ENST00000508499 RNASEH2BQ5TBB1 312 aaKnown RBP8.71□□□□□ -1.01
USP46-207ENST00000508499 ZNF776Q68DI1 518 aaPredicted RBP8.71□□□□□ -1.01
USP46-207ENST00000508499 HIBCHQ6NVY1 386 aaPredicted RBP8.71□□□□□ -1.01
USP46-207ENST00000508499 GDPD4Q6W3E5 623 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 LEKR1Q6ZMV7 388 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 B4GALNT4Q76KP1 1039 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 KBTBD6Q86V97 674 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 PPIL6Q8IXY8 311 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 NAT8LQ8N9F0 302 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 CPT1BQ92523 772 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 PEX13Q92968 403 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 SNF8Q96H20 258 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 MRGPRX2Q96LB1 330 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 MCCC1Q96RQ3 725 aaPredicted RBP8.71□□□□□ -1.01
USP46-207ENST00000508499 LRRC1Q9BTT6 524 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 ADGRE3Q9BY15 652 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 CEP41Q9BYV8 373 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 FOXP3Q9BZS1 431 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 TM6SF2Q9BZW4 377 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 TNKS2Q9H2K2 1166 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 KDM4CQ9H3R0 1056 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 MFSD1Q9H3U5 465 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 POLMQ9NP87 494 aaPredicted RBP8.71□□□□□ -1.01
USP46-207ENST00000508499 RRAGDQ9NQL2 400 aaPredicted RBP8.71□□□□□ -1.01
USP46-207ENST00000508499 PRMT8Q9NR22 394 aaPredicted RBP8.71□□□□□ -1.01
USP46-207ENST00000508499 RAB6BQ9NRW1 208 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 EVLQ9UI08 416 aaPredicted RBP8.71□□□□□ -1.01
USP46-207ENST00000508499 FZD4Q9ULV1 537 aa8.71□□□□□ -1.01
USP46-207ENST00000508499 TPX2Q9ULW0 747 aaKnown RBP8.71□□□□□ -1.01
USP46-207ENST00000508499 ANTXRLA6NF34 631 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 ANKRD66B4E2M5 251 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 H0Y858 1186 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 TNFRSF10AO00220 468 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 AP1G1O43747 822 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 PPFIA2O75334 1257 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 NDST3O95803 873 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 MT-CYBP00156 380 aaPredicted RBP8.71□□□□□ -1.02
USP46-207ENST00000508499 FGF1P05230 155 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 ZSCAN5DPP0CG00 497 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 HLA-EP13747 358 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 COL9A1P20849 921 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 PSMA3P25788 255 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 ADCY8P40145 1251 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 CD86P42081 329 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 SEC13P55735 322 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 WNT3AP56704 352 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 SARNPP82979 210 aaKnown RBP8.71□□□□□ -1.02
USP46-207ENST00000508499 CDK18Q07002 472 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 ITKQ08881 620 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 CUL1Q13616 776 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 SLC1A5Q15758 541 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 CST6Q15828 149 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 ARMC12Q5T9G4 340 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 KIAA1211LQ6NV74 962 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 PKN3Q6P5Z2 889 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 LRRC8BQ6P9F7 803 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 PPP1R21Q6ZMI0 780 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 Q6ZS52 159 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 NDUFAF2Q8N183 169 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 STK40Q8N2I9 435 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 CHST14Q8NCH0 376 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 SPATA22Q8NHS9 363 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 PIP4K2CQ8TBX8 421 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 PIH1D2Q8WWB5 315 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 ART4Q93070 314 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 SCRN2Q96FV2 425 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 EXOC2Q96KP1 924 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 MRGPRX1Q96LB2 322 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 RBM15Q96T37 977 aaKnown RBP eCLIP8.71□□□□□ -1.02
USP46-207ENST00000508499 MKRN2Q9H000 416 aaKnown RBP8.71□□□□□ -1.02
USP46-207ENST00000508499 TSPYL1Q9H0U9 437 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 MAGEE1Q9HCI5 957 aa8.71□□□□□ -1.02
USP46-207ENST00000508499 XAB2Q9HCS7 855 aaKnown RBP8.71□□□□□ -1.02
USP46-207ENST00000508499 CASS4Q9NQ75 786 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms