RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 FARP1Q9Y4F1 1045 aaPredicted RBP9.36□□□□□ -0.91
UBE2D3-223ENST00000508249 TRPM6Q9BX84 2022 aa9.36□□□□□ -0.91
UBE2D3-223ENST00000508249 AKAP9Q99996 3911 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 RNF103O00237 685 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 ATMINO43313 823 aaPredicted RBP9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 ATP9BO43861 1147 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 RAMP2O60895 175 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 CNTN5O94779 1100 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 GJB6O95452 261 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 ADH1BP00325 375 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 TMEM253P0C7T8 217 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 C5AR1P21730 350 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 EPHB2P29323 1055 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 CDC25BP30305 580 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 STK19P49842 368 aaPredicted RBP9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 DUSP3P51452 185 aaPredicted RBP9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 ZNF75DP51815 510 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 FOXK1P85037 733 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 CCDC15Q0P6D6 951 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 HADHQ16836 314 aaKnown RBP9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 ASTE1Q2TB18 679 aaPredicted RBP9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 POM121L1PQ3SYA9 428 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 ALFQ53S48 1182 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 SLC45A4Q5BKX6 768 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 PERM1Q5SV97 790 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 ERMARDQ5T6L9 678 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 FAM46CQ5VWP2 391 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 RWDD4Q6NW29 188 aaKnown RBP9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 GCNT7Q6ZNI0 430 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 NLRP14Q86W24 1093 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 CIR1Q86X95 450 aaPredicted RBP9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 APCDD1Q8J025 514 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 CCDC185Q8N715 623 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 RTL3Q8N8U3 475 aaKnown RBP9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 OR13H1Q8NG92 308 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 ZNF564Q8TBZ8 553 aaPredicted RBP9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 FRS2Q8WU20 508 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 TEKT4Q8WW24 435 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 ARRDC3Q96B67 414 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 SGF29Q96ES7 293 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 ALG14Q96F25 216 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 CALR3Q96L12 384 aaKnown RBP9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 NUP85Q9BW27 656 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 THAP2Q9H0W7 228 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 RBSNQ9H1K0 784 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 FZD3Q9NPG1 666 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 KLHL11Q9NVR0 708 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 MYO1AQ9UBC5 1043 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 ZNF212Q9UDV6 495 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 HPCAL4Q9UM19 191 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 AP4E1Q9UPM8 1137 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 OR51B4Q9Y5P0 310 aa9.35□□□□□ -0.91
UBE2D3-223ENST00000508249 CELSR1Q9NYQ6 3014 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 CREBBPQ92793 2442 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 TBC1D3DA0A087WVF3 549 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 TBC1D3IA0A087WXS9 549 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 TBC1D3EA0A087X179 549 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 TBC1D3KA0A087X1G2 549 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 TBC1D3FA6NER0 549 aaPredicted RBP9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 TBC1D3LB9A6J9 549 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 C1QTNF3-AMACRE9PGA6 284 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 SCAMP1O15126 338 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 LRCH4O75427 683 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 TNFSF15O95150 251 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 IPO7O95373 1038 aaKnown RBP9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 ITGA2BP08514 1039 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 TBC1D3HP0C7X1 549 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 THEGLP0DJG4 465 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 PRLRP16471 622 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 MIPP30301 263 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 MAN1A1P33908 653 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 CYLC1P35663 651 aaPredicted RBP9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 GGCXP38435 758 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 ARL4AP40617 200 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 ARHGAP25P42331 645 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 MLLT3P42568 568 aaPredicted RBP9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 RECQLP46063 649 aaPredicted RBP9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 HCAR3P49019 387 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 ADKP55263 362 aaKnown RBP9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 TPI1P60174 286 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 OGDHQ02218 1023 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 GNA12Q03113 381 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 DPYSL2Q16555 572 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 TBR1Q16650 682 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 PARP15Q460N3 678 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 TPRG1LQ5T0D9 272 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 TBC1D3GQ6DHY5 549 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 TBC1D3CQ6IPX1 549 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 CRTC1Q6UUV9 634 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 XKR5Q6UX68 686 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 TFAP2DQ7Z6R9 452 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 PLPP6Q8IY26 295 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 TBC1D3Q8IZP1 549 aaPredicted RBP9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 TXLNBQ8N3L3 684 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 SH2D3CQ8N5H7 860 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 LZTR1Q8N653 840 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 ZNF548Q8NEK5 533 aaPredicted RBP9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 MAPK15Q8TD08 544 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 OR8D1Q8WZ84 308 aa9.34□□□□□ -0.91
UBE2D3-223ENST00000508249 CCDC97Q96F63 343 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms