RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 UGP2Q16851 508 aa21.03■□□□□ 0.96
CLDND1-216ENST00000507944 RFX8Q6ZV50 586 aa21.03■□□□□ 0.96
CLDND1-216ENST00000507944 TP53I13Q8NBR0 393 aaPredicted RBP21.03■□□□□ 0.96
CLDND1-216ENST00000507944 ZNF641Q96N77 438 aaPredicted RBP21.03■□□□□ 0.96
CLDND1-216ENST00000507944 EDEM3Q9BZQ6 932 aa21.03■□□□□ 0.96
CLDND1-216ENST00000507944 SPASTQ9UBP0 616 aa21.03■□□□□ 0.96
CLDND1-216ENST00000507944 PTPRQQ9UMZ3 2332 aa21.03■□□□□ 0.96
CLDND1-216ENST00000507944 FASNP49327 2511 aaKnown RBP21.02■□□□□ 0.96
CLDND1-216ENST00000507944 TSPAN11A1L157 253 aa21.02■□□□□ 0.96
CLDND1-216ENST00000507944 TOR1BO14657 336 aa21.02■□□□□ 0.96
CLDND1-216ENST00000507944 TPP1O14773 563 aa21.02■□□□□ 0.96
CLDND1-216ENST00000507944 TLX3O43711 291 aaPredicted RBP21.02■□□□□ 0.96
CLDND1-216ENST00000507944 BUB1BO60566 1050 aaPredicted RBP21.02■□□□□ 0.96
CLDND1-216ENST00000507944 PALMO75781 387 aa21.02■□□□□ 0.96
CLDND1-216ENST00000507944 SKILP12757 684 aa21.02■□□□□ 0.96
CLDND1-216ENST00000507944 EIF4A3P38919 411 aaKnown RBP21.02■□□□□ 0.96
CLDND1-216ENST00000507944 NR1I3Q14994 352 aa21.02■□□□□ 0.96
CLDND1-216ENST00000507944 DEFB133Q30KQ1 61 aa21.02■□□□□ 0.96
CLDND1-216ENST00000507944 PPP6R3Q5H9R7 873 aaPredicted RBP21.02■□□□□ 0.96
CLDND1-216ENST00000507944 CDCP2Q5VXM1 449 aa21.02■□□□□ 0.96
CLDND1-216ENST00000507944 AFMIDQ63HM1 303 aa21.02■□□□□ 0.96
CLDND1-216ENST00000507944 PSTKQ8IV42 348 aaKnown RBP21.02■□□□□ 0.96
CLDND1-216ENST00000507944 PHACTR4Q8IZ21 702 aa21.02■□□□□ 0.96
CLDND1-216ENST00000507944 RBFAQ8N0V3 343 aa21.02■□□□□ 0.96
CLDND1-216ENST00000507944 ZNF653Q96CK0 615 aa21.02■□□□□ 0.96
CLDND1-216ENST00000507944 IL12RB2Q99665 862 aa21.02■□□□□ 0.96
CLDND1-216ENST00000507944 ABCG4Q9H172 646 aa21.02■□□□□ 0.96
CLDND1-216ENST00000507944 TCEAL2Q9H3H9 227 aaPredicted RBP21.02■□□□□ 0.96
CLDND1-216ENST00000507944 PCDH12Q9NPG4 1184 aa21.02■□□□□ 0.96
CLDND1-216ENST00000507944 NCKIPSDQ9NZQ3 722 aa21.02■□□□□ 0.96
CLDND1-216ENST00000507944 APOBEC3BQ9UH17 382 aaKnown RBP21.02■□□□□ 0.96
CLDND1-216ENST00000507944 SALL4Q9UJQ4 1053 aa21.02■□□□□ 0.96
CLDND1-216ENST00000507944 ANKRD36A6QL64 1941 aa21.02■□□□□ 0.95
CLDND1-216ENST00000507944 ITPR1Q14643 2758 aa21.01■□□□□ 0.95
CLDND1-216ENST00000507944 SERPINC1P01008 464 aa21.01■□□□□ 0.95
CLDND1-216ENST00000507944 CSNK1DP48730 415 aa21.01■□□□□ 0.95
CLDND1-216ENST00000507944 C1orf61Q13536 156 aa21.01■□□□□ 0.95
CLDND1-216ENST00000507944 LRRC14Q15048 493 aa21.01■□□□□ 0.95
CLDND1-216ENST00000507944 IQCB1Q15051 598 aa21.01■□□□□ 0.95
CLDND1-216ENST00000507944 IRF4Q15306 451 aa21.01■□□□□ 0.95
CLDND1-216ENST00000507944 CDKN3Q16667 212 aa21.01■□□□□ 0.95
CLDND1-216ENST00000507944 CFAP58Q5T655 872 aa21.01■□□□□ 0.95
CLDND1-216ENST00000507944 FAXCQ5TGI0 409 aa21.01■□□□□ 0.95
CLDND1-216ENST00000507944 ERAP2Q6P179 960 aa21.01■□□□□ 0.95
CLDND1-216ENST00000507944 BRAT1Q6PJG6 821 aa21.01■□□□□ 0.95
CLDND1-216ENST00000507944 CYP4V2Q6ZWL3 525 aaPredicted RBP21.01■□□□□ 0.95
CLDND1-216ENST00000507944 SRLQ86TD4 932 aa21.01■□□□□ 0.95
CLDND1-216ENST00000507944 CAMK1DQ8IU85 385 aa21.01■□□□□ 0.95
CLDND1-216ENST00000507944 ARHGAP12Q8IWW6 846 aa21.01■□□□□ 0.95
CLDND1-216ENST00000507944 TSEN2Q8NCE0 465 aaKnown RBP21.01■□□□□ 0.95
CLDND1-216ENST00000507944 IFI44Q8TCB0 444 aa21.01■□□□□ 0.95
CLDND1-216ENST00000507944 TUBGCP5Q96RT8 1024 aa21.01■□□□□ 0.95
CLDND1-216ENST00000507944 MYO1AQ9UBC5 1043 aa21.01■□□□□ 0.95
CLDND1-216ENST00000507944 PNMA8BQ9ULN7 279 aaPredicted RBP21.01■□□□□ 0.95
CLDND1-216ENST00000507944 COQ6Q9Y2Z9 468 aa21.01■□□□□ 0.95
CLDND1-216ENST00000507944 SCINQ9Y6U3 715 aa21.01■□□□□ 0.95
CLDND1-216ENST00000507944 CPED1A4D0V7 1026 aa21■□□□□ 0.95
CLDND1-216ENST00000507944 DFFAO00273 331 aa21■□□□□ 0.95
CLDND1-216ENST00000507944 RIOK3O14730 519 aaKnown RBP21■□□□□ 0.95
CLDND1-216ENST00000507944 BRINP1O60477 761 aa21■□□□□ 0.95
CLDND1-216ENST00000507944 LRCH4O75427 683 aa21■□□□□ 0.95
CLDND1-216ENST00000507944 GCATO75600 419 aa21■□□□□ 0.95
CLDND1-216ENST00000507944 MYBL1P10243 752 aa21■□□□□ 0.95
CLDND1-216ENST00000507944 EIF2S3P41091 472 aaKnown RBP21■□□□□ 0.95
CLDND1-216ENST00000507944 RGRP47804 291 aa21■□□□□ 0.95
CLDND1-216ENST00000507944 HCAR3P49019 387 aa21■□□□□ 0.95
CLDND1-216ENST00000507944 ZNF135P52742 658 aaPredicted RBP21■□□□□ 0.95
CLDND1-216ENST00000507944 ADKP55263 362 aaKnown RBP21■□□□□ 0.95
CLDND1-216ENST00000507944 PPARDQ03181 441 aa21■□□□□ 0.95
CLDND1-216ENST00000507944 WSCD2Q2TBF2 565 aa21■□□□□ 0.95
CLDND1-216ENST00000507944 PRRT3Q5FWE3 981 aa21■□□□□ 0.95
CLDND1-216ENST00000507944 MACC1Q6ZN28 852 aa21■□□□□ 0.95
CLDND1-216ENST00000507944 MAPK15Q8TD08 544 aa21■□□□□ 0.95
CLDND1-216ENST00000507944 FGF11Q92914 225 aa21■□□□□ 0.95
CLDND1-216ENST00000507944 TRIM11Q96F44 468 aa21■□□□□ 0.95
CLDND1-216ENST00000507944 TBATAQ96M53 351 aa21■□□□□ 0.95
CLDND1-216ENST00000507944 DEPDC7Q96QD5 511 aa21■□□□□ 0.95
CLDND1-216ENST00000507944 SLC13A1Q9BZW2 595 aa21■□□□□ 0.95
CLDND1-216ENST00000507944 SP110Q9HB58 689 aa21■□□□□ 0.95
CLDND1-216ENST00000507944 MRPL47Q9HD33 250 aaKnown RBP21■□□□□ 0.95
CLDND1-216ENST00000507944 CWC15Q9P013 229 aaKnown RBP21■□□□□ 0.95
CLDND1-216ENST00000507944 PCDHB1Q9Y5F3 818 aa21■□□□□ 0.95
CLDND1-216ENST00000507944 C6P13671 934 aa20.99■□□□□ 0.95
CLDND1-216ENST00000507944 ITPKBP27987 946 aa20.99■□□□□ 0.95
CLDND1-216ENST00000507944 ABCG1P45844 678 aa20.99■□□□□ 0.95
CLDND1-216ENST00000507944 PEX5P50542 639 aa20.99■□□□□ 0.95
CLDND1-216ENST00000507944 IL10RBQ08334 325 aa20.99■□□□□ 0.95
CLDND1-216ENST00000507944 GUSBP11Q6P575 273 aa20.99■□□□□ 0.95
CLDND1-216ENST00000507944 LRRC69Q6ZNQ3 347 aa20.99■□□□□ 0.95
CLDND1-216ENST00000507944 ARHGAP36Q6ZRI8 547 aa20.99■□□□□ 0.95
CLDND1-216ENST00000507944 ZSWIM9Q86XI8 627 aa20.99■□□□□ 0.95
CLDND1-216ENST00000507944 NPWQ8N729 165 aa20.99■□□□□ 0.95
CLDND1-216ENST00000507944 FUCA2Q9BTY2 467 aa20.99■□□□□ 0.95
CLDND1-216ENST00000507944 LRRC61Q9BV99 259 aa20.99■□□□□ 0.95
CLDND1-216ENST00000507944 CINPQ9BW66 212 aaPredicted RBP20.99■□□□□ 0.95
CLDND1-216ENST00000507944 ISCUQ9H1K1 167 aa20.99■□□□□ 0.95
CLDND1-216ENST00000507944 ATP13A3Q9H7F0 1226 aa20.99■□□□□ 0.95
CLDND1-216ENST00000507944 ATP8A1Q9Y2Q0 1164 aa20.99■□□□□ 0.95
CLDND1-216ENST00000507944 NBEAQ8NFP9 2946 aa20.99■□□□□ 0.95
CLDND1-216ENST00000507944 EME2A4GXA9 379 aaPredicted RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms