RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 KIAA1324Q6UXG2 1013 aaKnown RBP8.54□□□□□ -1.04
PDGFC-205ENST00000506880 LINGO4Q6UY18 593 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 ZNF572Q7Z3I7 529 aaPredicted RBP8.54□□□□□ -1.04
PDGFC-205ENST00000506880 CYP2U1Q7Z449 544 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 PRPF39Q86UA1 669 aaKnown RBP8.54□□□□□ -1.04
PDGFC-205ENST00000506880 CNPY4Q8N129 248 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 OXR1Q8N573 874 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 IFT43Q96FT9 208 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 SCRN2Q96FV2 425 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 LGMNQ99538 433 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 FAM129AQ9BZQ8 928 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 ZDHHC6Q9H6R6 413 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 USP29Q9HBJ7 922 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 ARNT2Q9HBZ2 717 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 GLOD4Q9HC38 313 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 EIF2B3Q9NR50 452 aaKnown RBP8.54□□□□□ -1.04
PDGFC-205ENST00000506880 TRMT1Q9NXH9 659 aaKnown RBP8.54□□□□□ -1.04
PDGFC-205ENST00000506880 PCYOX1Q9UHG3 505 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 PYCARDQ9ULZ3 195 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 HS3ST3A1Q9Y663 406 aa8.54□□□□□ -1.04
PDGFC-205ENST00000506880 EP300Q09472 2414 aaPredicted RBP8.54□□□□□ -1.04
PDGFC-205ENST00000506880 C16orf96A6NNT2 1141 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 K7ERQ8 282 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 RNF103O00237 685 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 KPNA3O00505 521 aaPredicted RBP8.53□□□□□ -1.04
PDGFC-205ENST00000506880 MID1O15344 667 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 MAP3K13O43283 966 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 CEP104O60308 925 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 EPN2O95208 641 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 PGLSO95336 258 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 NDST3O95803 873 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 JCHAINP01591 159 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 FGF1P05230 155 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 CTSLP07711 333 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 HOXC4P09017 264 aaPredicted RBP8.53□□□□□ -1.04
PDGFC-205ENST00000506880 PECAM1P16284 738 aaPredicted RBP8.53□□□□□ -1.04
PDGFC-205ENST00000506880 SDHBP21912 280 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 CD27P26842 260 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 CASQ1P31415 396 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 PSMD8P48556 350 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 FNTBP49356 437 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 DNA2P51530 1060 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 ADPRHP54922 357 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 DYNLT1P63172 113 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 SARNPP82979 210 aaKnown RBP8.53□□□□□ -1.04
PDGFC-205ENST00000506880 WASHC5Q12768 1159 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 ILF2Q12905 390 aaKnown RBP8.53□□□□□ -1.04
PDGFC-205ENST00000506880 SIM2Q14190 667 aaPredicted RBP8.53□□□□□ -1.04
PDGFC-205ENST00000506880 LONRF2Q1L5Z9 754 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 PLK5Q496M5 336 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 ARSIQ5FYB1 569 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 PIP5KL1Q5T9C9 394 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 KIAA0895LQ68EN5 471 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 PDPK2PQ6A1A2 396 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 IL27RAQ6UWB1 636 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 CEP68Q76N32 757 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 ZNF765Q7L2R6 523 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 PID1Q7Z2X4 250 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 PCGF5Q86SE9 256 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 HORMAD1Q86X24 394 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 CPNE8Q86YQ8 564 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 SYT12Q8IV01 421 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 NRSN1Q8IZ57 195 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 HDDC3Q8N4P3 179 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 CCDC89Q8N998 374 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 PRSS33Q8NF86 280 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 ARRDC2Q8TBH0 407 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 TOE1Q96GM8 510 aaKnown RBP8.53□□□□□ -1.04
PDGFC-205ENST00000506880 TBATAQ96M53 351 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 SEMA3CQ99985 751 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 HEMGNQ9BXL5 484 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 TDRD1Q9BXT4 1180 aaKnown RBP8.53□□□□□ -1.04
PDGFC-205ENST00000506880 TM6SF2Q9BZW4 377 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 LRRC40Q9H9A6 602 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 PCDH9Q9HC56 1237 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 MAGEE1Q9HCI5 957 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 NT5MQ9NPB1 228 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 KLHL8Q9P2G9 620 aaPredicted RBP8.53□□□□□ -1.04
PDGFC-205ENST00000506880 GMEB2Q9UKD1 530 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 RIMKLBQ9ULI2 386 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 PACSIN2Q9UNF0 486 aaPredicted RBP8.53□□□□□ -1.04
PDGFC-205ENST00000506880 ZNF148Q9UQR1 794 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 FADS3Q9Y5Q0 445 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 SDK1Q7Z5N4 2213 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 WDFY4Q6ZS81 3184 aa8.53□□□□□ -1.04
PDGFC-205ENST00000506880 GVINP1Q7Z2Y8 2422 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 A0A0U1RQJ8 604 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 LOC285095A0A1B0GVY8 99 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 A0A1W2PPC4 97 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 ANKRD66B4E2M5 251 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 PRAMEF26H0Y7S4 382 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 PDE2AO00408 941 aaPredicted RBP8.52□□□□□ -1.05
PDGFC-205ENST00000506880 KCNN4O15554 427 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 PHF2O75151 1096 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 RNASEH2AO75792 299 aaKnown RBP8.52□□□□□ -1.05
PDGFC-205ENST00000506880 CPP00450 1065 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 ATP1A1P05023 1023 aaKnown RBP8.52□□□□□ -1.05
PDGFC-205ENST00000506880 HLA-DQB2P05538 268 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 UGT2B4P06133 528 aa8.52□□□□□ -1.05
PDGFC-205ENST00000506880 MMP12P39900 470 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms