RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.17□□□□□ -0.943e-6■■□□□ 12.3
PDLIM5-209ENST00000506632 ZFYVE26Q68DK2 2539 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 FAM208BQ5VWN6 2430 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 TDRD6O60522 2096 aaKnown RBP9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 LRRK1Q38SD2 2015 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 SPEGQ15772 3267 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 SRRM3A6NNA2 597 aaPredicted RBP9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 H3BRJ5 948 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 FPGTO14772 594 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 MUSKO15146 869 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 DAPK3O43293 454 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 SIGLEC6O43699 453 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 MMP20O60882 483 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 TM7SF2O76062 418 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 PEX11BO96011 259 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 CSF2P04141 144 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 NME1P15531 152 aaKnown RBP9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 AMPD1P23109 780 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 ACP1P24666 158 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 IGFALSP35858 605 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 MMP12P39900 470 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 ARSEP51690 589 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 HNRNPKP61978 463 aaKnown RBP eCLIP9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 NSUN2Q08J23 767 aaKnown RBP eCLIP9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 ELP6Q0PNE2 266 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 EIF2B5Q13144 721 aaKnown RBP9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 SGCGQ13326 291 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 ILKQ13418 452 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 AGERQ15109 404 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 UGP2Q16851 508 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 SMTNL2Q2TAL5 461 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 CCDC122Q5T0U0 273 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 BRAT1Q6PJG6 821 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 KDM7AQ6ZMT4 941 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 SRLQ86TD4 932 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 PARGQ86W56 976 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 TMPRSS12Q86WS5 348 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 ZSWIM9Q86XI8 627 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 PROSER1Q86XN7 944 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 MARCH9Q86YJ5 346 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 CAMK1DQ8IU85 385 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 TP53I13Q8NBR0 393 aaPredicted RBP9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 BTBD6Q96KE9 485 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 ZNF599Q96NL3 588 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 PSKH2Q96QS6 385 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 DNAJC7Q99615 494 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 SP110Q9HB58 689 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 PCDH18Q9HCL0 1135 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 PCDH12Q9NPG4 1184 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 DKK4Q9UBT3 224 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 IP6K2Q9UHH9 426 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 IPO11Q9UI26 975 aaKnown RBP9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 KLF15Q9UIH9 416 aa9.16□□□□□ -0.94
PDLIM5-209ENST00000506632 ZZEF1O43149 2961 aa9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 ANKRD36A6QL64 1941 aa9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 LY6G6EA0A0G2JKS1 128 aa9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 SSU72P8A0A1W2PR75 194 aa9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 DFFAO00273 331 aa9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 TRAFD1O14545 582 aaPredicted RBP9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 TOR1BO14657 336 aa9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 SCAMP1O15126 338 aa9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 MAFKO60675 156 aa9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 PALMO75781 387 aa9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 TPM3P06753 285 aa9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 CR2P20023 1033 aa9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 IL4RP24394 825 aa9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 SERPINA4P29622 427 aa9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 EIF4A3P38919 411 aaKnown RBP9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 ARL4AP40617 200 aa9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 YPEL5P62699 121 aa9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 SLC10A7Q0GE19 358 aa9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 PDE1CQ14123 709 aaPredicted RBP9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 SLC18A3Q16572 532 aa9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 TMCO4Q5TGY1 634 aa9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 SPECC1LQ69YQ0 1117 aa9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 TMCO3Q6UWJ1 677 aa9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 CACTIN-AS1Q8N1I8 211 aa9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 FAM181AQ8N9Y4 354 aa9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 ZNF548Q8NEK5 533 aaPredicted RBP9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 CXorf40AQ8TE69 158 aa9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 RFFLQ8WZ73 363 aa9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 HSPH1Q92598 858 aa9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 MS4A3Q96HJ5 214 aa9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 TBATAQ96M53 351 aa9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 CINPQ9BW66 212 aaPredicted RBP9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 ATP13A3Q9H7F0 1226 aa9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 MBNL1Q9NR56 388 aaKnown RBP9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 DNAJC28Q9NX36 388 aa9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 NLGN3Q9NZ94 848 aa9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 RCOR3Q9P2K3 495 aaPredicted RBP9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 SEPT3Q9UH03 358 aa9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 PNMA8BQ9ULN7 279 aaPredicted RBP9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 ATP8A1Q9Y2Q0 1164 aa9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 CSNK1G3Q9Y6M4 447 aa9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 U3KQA8 63 aa9.15□□□□□ -0.94
PDLIM5-209ENST00000506632 CFAP69A5D8W1 941 aa9.14□□□□□ -0.95
PDLIM5-209ENST00000506632 FAM149AA5PLN7 773 aa9.14□□□□□ -0.95
PDLIM5-209ENST00000506632 NEMP2A6NFY4 417 aa9.14□□□□□ -0.95
PDLIM5-209ENST00000506632 K7ESM1 405 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms