RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 A0A1B0GVM2 712 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 HEATR9A2RTY3 570 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 TCAF2A6NFQ2 919 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 A8MUI8 341 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 TIMM44O43615 452 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 CLDN11O75508 207 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 ARHGEF15O94989 841 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 PRLP01236 227 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 THOC5Q13769 683 aaKnown RBP12.29□□□□□ -0.44
LIN54-206ENST00000506560 SEMA3AQ14563 771 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 TMC7Q7Z402 723 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 C2CD4AQ8NCU7 369 aaPredicted RBP12.29□□□□□ -0.44
LIN54-206ENST00000506560 PPP1R14CQ8TAE6 165 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 RIN3Q8TB24 985 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 AGR3Q8TD06 166 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 ELMO2Q96JJ3 720 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 MGME1Q9BQP7 344 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 PNPOQ9NVS9 261 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 MROH6A6NGR9 719 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 CCL16O15467 120 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 KDELR3O43731 214 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 DNAJC8O75937 253 aaPredicted RBP12.29□□□□□ -0.44
LIN54-206ENST00000506560 CXCL14O95715 111 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 CTSAP10619 480 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 HSPA8P11142 646 aaKnown RBP12.29□□□□□ -0.44
LIN54-206ENST00000506560 TNK2Q07912 1038 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 CTC1Q2NKJ3 1217 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 MAVSQ7Z434 540 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 CLNKQ7Z7G1 428 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 TMC8Q8IU68 726 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 CNPY4Q8N129 248 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 OR6K2Q8NGY2 324 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 NXNL1Q96CM4 212 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 SGF29Q96ES7 293 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 IFT43Q96FT9 208 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 C7orf26Q96N11 449 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 TRIB3Q96RU7 358 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 OMDQ99983 421 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 CINPQ9BW66 212 aaPredicted RBP12.29□□□□□ -0.44
LIN54-206ENST00000506560 LRRC3Q9BY71 257 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 NMUR2Q9GZQ4 415 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 IL23AQ9NPF7 189 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 DONSONQ9NYP3 566 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 HSFX1Q9UBD0 423 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 DNAJC16Q9Y2G8 782 aa12.29□□□□□ -0.44
LIN54-206ENST00000506560 FCF1Q9Y324 198 aaKnown RBP12.29□□□□□ -0.44
LIN54-206ENST00000506560 AP3B1O00203 1094 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 BIRC5O15392 142 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 RFPL2O75678 378 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 RASSF9O75901 435 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 C8AP07357 584 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 CPA3P15088 417 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 SYN1P17600 705 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 EN2P19622 333 aaPredicted RBP12.28□□□□□ -0.44
LIN54-206ENST00000506560 CR2P20023 1033 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 SLC8A1P32418 973 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 SLC1A6P48664 564 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 AQP5P55064 265 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 ATXN7L2Q5T6C5 722 aaPredicted RBP12.28□□□□□ -0.44
LIN54-206ENST00000506560 VWA5B1Q5TIE3 1220 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 TPGS1Q6ZTW0 290 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 BBS7Q8IWZ6 715 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 CEP295NLQ96MC4 621 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 PSKH2Q96QS6 385 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 ACE2Q9BYF1 805 aaPredicted RBP12.28□□□□□ -0.44
LIN54-206ENST00000506560 TASP1Q9H6P5 420 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 NMRAL1Q9HBL8 299 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 MRM3Q9HC36 420 aaKnown RBP12.28□□□□□ -0.44
LIN54-206ENST00000506560 ARL8BQ9NVJ2 186 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 ZFP69BQ9UJL9 534 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 CCL26Q9Y258 94 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 TBC1D30Q9Y2I9 924 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 CRYL1Q9Y2S2 319 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 PCDHB12Q9Y5F1 795 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 ANKRD12Q6UB98 2062 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 ILVBLA1L0T0 632 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 H0Y626 953 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 CKMP06732 381 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 GSTA1P08263 222 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 KRT16P08779 473 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 CSKP41240 450 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 PLPP4Q5VZY2 271 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 ATG16L1Q676U5 607 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 PIM3Q86V86 326 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 CCDC117Q8IWD4 279 aaPredicted RBP12.28□□□□□ -0.44
LIN54-206ENST00000506560 APCDD1Q8J025 514 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 FIBCD1Q8N539 461 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 PDCD6IPQ8WUM4 868 aaKnown RBP12.28□□□□□ -0.44
LIN54-206ENST00000506560 TCEAL4Q96EI5 215 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 CORO1BQ9BR76 489 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 SHCBP1LQ9BZQ2 653 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 TLR9Q9NR96 1032 aa12.28□□□□□ -0.44
LIN54-206ENST00000506560 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.28□□□□□ -0.446e-8■■■■□ 22.2
LIN54-206ENST00000506560 FNDC3AQ9Y2H6 1198 aaKnown RBP12.28□□□□□ -0.44
LIN54-206ENST00000506560 NOTCH4Q99466 2003 aa12.27□□□□□ -0.44
LIN54-206ENST00000506560 ALPK3Q96L96 1907 aa12.27□□□□□ -0.44
LIN54-206ENST00000506560 NEMP2A6NFY4 417 aa12.27□□□□□ -0.44
LIN54-206ENST00000506560 INSIG1O15503 277 aa12.27□□□□□ -0.44
LIN54-206ENST00000506560 GPR39O43194 453 aa12.27□□□□□ -0.44
LIN54-206ENST00000506560 ZMPSTE24O75844 475 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms