RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 GARSP41250 739 aaKnown RBP3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 CDH8P55286 799 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 ZXDAP98168 799 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 LRMPQ12912 555 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 CSTF3Q12996 717 aaKnown RBP3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 GALNT3Q14435 633 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 PSMD6Q15008 389 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 PPP2R5BQ15173 497 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 HIST2H2ACQ16777 129 aaPredicted RBP3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 AWAT1Q58HT5 328 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 RAB41Q5JT25 222 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 AKNAD1Q5T1N1 836 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 HECTD2Q5U5R9 776 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 ARMC3Q5W041 872 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 NAA16Q6N069 864 aaPredicted RBP3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 CHST9Q7L1S5 443 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 AMER2Q8N7J2 671 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 CCDC191Q8NCU4 936 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 HDAC7Q8WUI4 952 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 TMEM170AQ8WVE7 144 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 FAR1Q8WVX9 515 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 WDFY2Q96P53 400 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 FCRL5Q96RD9 977 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 TIMP4Q99727 224 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 BAG1Q99933 345 aaPredicted RBP3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 ZNF341Q9BYN7 854 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 CXorf56Q9H5V9 222 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 POLR1BQ9H9Y6 1135 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 SCPEP1Q9HB40 452 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 CPNE5Q9HCH3 593 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 ASAH2Q9NR71 780 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 DLGAP2Q9P1A6 1054 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 MORF4L1Q9UBU8 362 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 CHORDC1Q9UHD1 332 aaPredicted RBP3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 SESN1Q9Y6P5 492 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 ADGRL2O95490 1459 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 NKTRP30414 1462 aaKnown RBP3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 XIRP1Q702N8 1843 aaKnown RBP3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 TET3O43151 1660 aa3.39□□□□□ -1.87
TRAPPC11-205ENST00000506426 MSH6P52701 1360 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 MST1RQ04912 1400 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 FAM135BQ49AJ0 1406 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 ADAMTS13Q76LX8 1427 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 CXorf65A6NEN9 183 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 TMEM191CA6NGB0 347 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 FAM157AC9JC47 383 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 C1QTNF3-AMACRE9PGA6 284 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 TAF4O00268 1085 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 INPPL1O15357 1258 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 RNF8O76064 485 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 IPO7O95373 1038 aaKnown RBP3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 PGM3O95394 542 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 APOA4P06727 396 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 ADRB2P07550 413 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 CD63P08962 238 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 CLTBP09497 229 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 PTPN2P17706 415 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 TNFRSF1AP19438 455 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 TFEBP19484 476 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 WT1P19544 449 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 SAT1P21673 171 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 KLRC2P26717 231 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 YWHAQP27348 245 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 PTGER1P34995 402 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 PLA2G5P39877 138 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 PIP4K2AP48426 406 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 PRPF4BQ13523 1007 aaKnown RBP3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 RNPS1Q15287 305 aaKnown RBP3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 ME3Q16798 604 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 TXNDC8Q6A555 127 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 TSSK4Q6SA08 328 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 FAM83HQ6ZRV2 1179 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 CYB5R4Q7L1T6 521 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 SPRED1Q7Z699 444 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 IGFN1Q86VF2 1251 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 WDR5BQ86VZ2 330 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 TEX11Q8IYF3 940 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 ARL14EPQ8N8R7 260 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 SLC16A11Q8NCK7 471 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 NEU4Q8WWR8 484 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 PSPC1Q8WXF1 523 aaKnown RBP3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 CCDC34Q96HJ3 373 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 PGAM5Q96HS1 289 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 RADILQ96JH8 1075 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 UROC1Q96N76 676 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 TM2D2Q9BX73 214 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 TEX12Q9BXU0 123 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 FRMD8Q9BZ67 464 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 HIPK3Q9H422 1215 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 TOR3AQ9H497 397 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 PDE7BQ9NP56 450 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 SPATS2LQ9NUQ6 558 aaKnown RBP3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 SUCLA2Q9P2R7 463 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 NOL7Q9UMY1 257 aaKnown RBP3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 FAM96BQ9Y3D0 163 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 PLEKHG1Q9ULL1 1385 aa3.38□□□□□ -1.87
TRAPPC11-205ENST00000506426 COL16A1Q07092 1604 aaPredicted RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms