RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 ARHGEF26Q96DR7 871 aa14.54□□□□□ -0.08
CDC42SE2-209ENST00000506419 PCDH12Q9NPG4 1184 aa14.54□□□□□ -0.08
CDC42SE2-209ENST00000506419 ETNK2Q9NVF9 386 aa14.54□□□□□ -0.08
CDC42SE2-209ENST00000506419 COQ6Q9Y2Z9 468 aa14.54□□□□□ -0.08
CDC42SE2-209ENST00000506419 TP53BP1Q12888 1972 aaPredicted RBP14.53□□□□□ -0.08
CDC42SE2-209ENST00000506419 TTC24A2A3L6 582 aaPredicted RBP14.53□□□□□ -0.08
CDC42SE2-209ENST00000506419 NEMP2A6NFY4 417 aa14.53□□□□□ -0.08
CDC42SE2-209ENST00000506419 ARHGAP42A6NI28 874 aa14.53□□□□□ -0.08
CDC42SE2-209ENST00000506419 EIF3CLB5ME19 914 aaKnown RBP14.53□□□□□ -0.08
CDC42SE2-209ENST00000506419 RIOK3O14730 519 aaKnown RBP14.53□□□□□ -0.08
CDC42SE2-209ENST00000506419 AMPD1P23109 780 aa14.53□□□□□ -0.08
CDC42SE2-209ENST00000506419 HNF1BP35680 557 aa14.53□□□□□ -0.08
CDC42SE2-209ENST00000506419 CSNK1DP48730 415 aa14.53□□□□□ -0.08
CDC42SE2-209ENST00000506419 C1orf61Q13536 156 aa14.53□□□□□ -0.08
CDC42SE2-209ENST00000506419 DPYSQ14117 519 aa14.53□□□□□ -0.08
CDC42SE2-209ENST00000506419 RTP5Q14D33 572 aa14.53□□□□□ -0.08
CDC42SE2-209ENST00000506419 CDCP2Q5VXM1 449 aa14.53□□□□□ -0.08
CDC42SE2-209ENST00000506419 TXNRD3NBQ6F5E7 133 aa14.53□□□□□ -0.08
CDC42SE2-209ENST00000506419 PSTKQ8IV42 348 aaKnown RBP14.53□□□□□ -0.08
CDC42SE2-209ENST00000506419 RBFAQ8N0V3 343 aa14.53□□□□□ -0.08
CDC42SE2-209ENST00000506419 LMX1AQ8TE12 382 aa14.53□□□□□ -0.08
CDC42SE2-209ENST00000506419 CPLX3Q8WVH0 158 aa14.53□□□□□ -0.08
CDC42SE2-209ENST00000506419 ZNF641Q96N77 438 aaPredicted RBP14.53□□□□□ -0.08
CDC42SE2-209ENST00000506419 EIF3CQ99613 913 aaKnown RBP14.53□□□□□ -0.08
CDC42SE2-209ENST00000506419 DONSONQ9NYP3 566 aa14.53□□□□□ -0.08
CDC42SE2-209ENST00000506419 CLCA2Q9UQC9 943 aa14.53□□□□□ -0.08
CDC42SE2-209ENST00000506419 CSNK1G3Q9Y6M4 447 aa14.53□□□□□ -0.08
CDC42SE2-209ENST00000506419 CACNA1GO43497 2377 aa14.52□□□□□ -0.08
CDC42SE2-209ENST00000506419 DFFAO00273 331 aa14.52□□□□□ -0.09
CDC42SE2-209ENST00000506419 AQP9O43315 295 aa14.52□□□□□ -0.09
CDC42SE2-209ENST00000506419 TLX3O43711 291 aaPredicted RBP14.52□□□□□ -0.09
CDC42SE2-209ENST00000506419 OPA1O60313 960 aa14.52□□□□□ -0.09
CDC42SE2-209ENST00000506419 PALMO75781 387 aa14.52□□□□□ -0.09
CDC42SE2-209ENST00000506419 PEX11BO96011 259 aa14.52□□□□□ -0.09
CDC42SE2-209ENST00000506419 DESP17661 470 aa14.52□□□□□ -0.09
CDC42SE2-209ENST00000506419 PCK1P35558 622 aa14.52□□□□□ -0.09
CDC42SE2-209ENST00000506419 EIF4A3P38919 411 aaKnown RBP14.52□□□□□ -0.09
CDC42SE2-209ENST00000506419 SUOXP51687 545 aa14.52□□□□□ -0.09
CDC42SE2-209ENST00000506419 UBASH3AP57075 661 aa14.52□□□□□ -0.09
CDC42SE2-209ENST00000506419 YPEL5P62699 121 aa14.52□□□□□ -0.09
CDC42SE2-209ENST00000506419 NSUN2Q08J23 767 aaKnown RBP eCLIP14.52□□□□□ -0.09
CDC42SE2-209ENST00000506419 DEFB133Q30KQ1 61 aa14.52□□□□□ -0.09
CDC42SE2-209ENST00000506419 POLNQ7Z5Q5 900 aa14.52□□□□□ -0.09
CDC42SE2-209ENST00000506419 FUBP1Q96AE4 644 aaKnown RBP14.52□□□□□ -0.09
CDC42SE2-209ENST00000506419 BTBD6Q96KE9 485 aa14.52□□□□□ -0.09
CDC42SE2-209ENST00000506419 NRSN2Q9GZP1 204 aa14.52□□□□□ -0.09
CDC42SE2-209ENST00000506419 CLPBQ9H078 707 aa14.52□□□□□ -0.09
CDC42SE2-209ENST00000506419 MRPL47Q9HD33 250 aaKnown RBP14.52□□□□□ -0.09
CDC42SE2-209ENST00000506419 SCINQ9Y6U3 715 aa14.52□□□□□ -0.09
CDC42SE2-209ENST00000506419 ASXL3Q9C0F0 2248 aa14.51□□□□□ -0.09
CDC42SE2-209ENST00000506419 TDRD6O60522 2096 aaKnown RBP14.51□□□□□ -0.09
CDC42SE2-209ENST00000506419 A0A087WV48 116 aa14.51□□□□□ -0.09
CDC42SE2-209ENST00000506419 A0A1W2PQJ5 194 aa14.51□□□□□ -0.09
CDC42SE2-209ENST00000506419 CASC3O15234 703 aaKnown RBP14.51□□□□□ -0.09
CDC42SE2-209ENST00000506419 MYBL1P10243 752 aa14.51□□□□□ -0.09
CDC42SE2-209ENST00000506419 RARAP10276 462 aa14.51□□□□□ -0.09
CDC42SE2-209ENST00000506419 ALPPL2P10696 532 aa14.51□□□□□ -0.09
CDC42SE2-209ENST00000506419 C6P13671 934 aa14.51□□□□□ -0.09
CDC42SE2-209ENST00000506419 XPAP23025 273 aaPredicted RBP14.51□□□□□ -0.09
CDC42SE2-209ENST00000506419 LIG3P49916 1009 aa14.51□□□□□ -0.09
CDC42SE2-209ENST00000506419 ADKP55263 362 aaKnown RBP14.51□□□□□ -0.09
CDC42SE2-209ENST00000506419 IL10RBQ08334 325 aa14.51□□□□□ -0.09
CDC42SE2-209ENST00000506419 SLC10A7Q0GE19 358 aa14.51□□□□□ -0.09
CDC42SE2-209ENST00000506419 IRF4Q15306 451 aa14.51□□□□□ -0.09
CDC42SE2-209ENST00000506419 SMTNL2Q2TAL5 461 aa14.51□□□□□ -0.09
CDC42SE2-209ENST00000506419 BOLA3Q53S33 107 aa14.51□□□□□ -0.09
CDC42SE2-209ENST00000506419 HS1BP3Q53T59 392 aa14.51□□□□□ -0.09
CDC42SE2-209ENST00000506419 SYN2Q92777 582 aaPredicted RBP14.51□□□□□ -0.09
CDC42SE2-209ENST00000506419 ECHDC3Q96DC8 303 aa14.51□□□□□ -0.09
CDC42SE2-209ENST00000506419 CRELD1Q96HD1 420 aa14.51□□□□□ -0.09
CDC42SE2-209ENST00000506419 NCAPGQ9BPX3 1015 aa14.51□□□□□ -0.09
CDC42SE2-209ENST00000506419 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.51□□□□□ -0.09
CDC42SE2-209ENST00000506419 DUSP23Q9BVJ7 150 aa14.51□□□□□ -0.09
CDC42SE2-209ENST00000506419 THAP2Q9H0W7 228 aa14.51□□□□□ -0.09
CDC42SE2-209ENST00000506419 ZWILCHQ9H900 591 aa14.51□□□□□ -0.09
CDC42SE2-209ENST00000506419 SALL4Q9UJQ4 1053 aa14.51□□□□□ -0.09
CDC42SE2-209ENST00000506419 CAPN11Q9UMQ6 739 aa14.51□□□□□ -0.09
CDC42SE2-209ENST00000506419 PCDHB1Q9Y5F3 818 aa14.51□□□□□ -0.09
CDC42SE2-209ENST00000506419 AK5Q9Y6K8 562 aa14.51□□□□□ -0.09
CDC42SE2-209ENST00000506419 LOC400499M0QZD8 3231 aa14.51□□□□□ -0.09
CDC42SE2-209ENST00000506419 A0A087X0T9 212 aa14.5□□□□□ -0.09
CDC42SE2-209ENST00000506419 TRAFD1O14545 582 aaPredicted RBP14.5□□□□□ -0.09
CDC42SE2-209ENST00000506419 TPP1O14773 563 aa14.5□□□□□ -0.09
CDC42SE2-209ENST00000506419 YY2O15391 372 aa14.5□□□□□ -0.09
CDC42SE2-209ENST00000506419 CELA2BP08218 269 aaPredicted RBP14.5□□□□□ -0.09
CDC42SE2-209ENST00000506419 FAM228BP0C875 321 aa14.5□□□□□ -0.09
CDC42SE2-209ENST00000506419 TSHRP16473 764 aa14.5□□□□□ -0.09
CDC42SE2-209ENST00000506419 GM2AP17900 193 aa14.5□□□□□ -0.09
CDC42SE2-209ENST00000506419 IL4RP24394 825 aa14.5□□□□□ -0.09
CDC42SE2-209ENST00000506419 ZBED6P86452 979 aa14.5□□□□□ -0.09
CDC42SE2-209ENST00000506419 ELP6Q0PNE2 266 aa14.5□□□□□ -0.09
CDC42SE2-209ENST00000506419 PTK2BQ14289 1009 aa14.5□□□□□ -0.09
CDC42SE2-209ENST00000506419 INPP5AQ14642 412 aa14.5□□□□□ -0.09
CDC42SE2-209ENST00000506419 GRM3Q14832 879 aa14.5□□□□□ -0.09
CDC42SE2-209ENST00000506419 ACAP1Q15027 740 aa14.5□□□□□ -0.09
CDC42SE2-209ENST00000506419 LRRC14Q15048 493 aa14.5□□□□□ -0.09
CDC42SE2-209ENST00000506419 DPYSL2Q16555 572 aa14.5□□□□□ -0.09
CDC42SE2-209ENST00000506419 CDKN3Q16667 212 aa14.5□□□□□ -0.09
CDC42SE2-209ENST00000506419 PRRT3Q5FWE3 981 aa14.5□□□□□ -0.09
CDC42SE2-209ENST00000506419 FAXCQ5TGI0 409 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms