RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 BLKP51451 505 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 VAMP7P51809 220 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 PLK1P53350 603 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 SRP54P61011 504 aaKnown RBP3.38□□□□□ -1.87
TCOF1-208ENST00000506063 IRX6P78412 446 aaPredicted RBP3.38□□□□□ -1.87
TCOF1-208ENST00000506063 PPP2R2BQ00005 443 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 NUCB1Q02818 461 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 PTK2Q05397 1052 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 KCNA1Q09470 495 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 DLG2Q15700 870 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 TTC22Q5TAA0 569 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 B4GALNT3Q6L9W6 998 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 CXorf57Q6NSI4 855 aaKnown RBP3.38□□□□□ -1.87
TCOF1-208ENST00000506063 Q6ZUG5 572 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 TADA2BQ86TJ2 420 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 ACOT1Q86TX2 421 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 CHD1LQ86WJ1 897 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 NRROSQ86YC3 692 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 DMRTC2Q8IXT2 367 aaPredicted RBP3.38□□□□□ -1.87
TCOF1-208ENST00000506063 CBARPQ8N350 705 aaPredicted RBP3.38□□□□□ -1.87
TCOF1-208ENST00000506063 SH2D3CQ8N5H7 860 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 ZBTB2Q8N680 514 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 C4orf32Q8N8J7 132 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 C12orf29Q8N999 325 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 IGSF22Q8N9C0 903 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 CHST14Q8NCH0 376 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 TMIEQ8NEW7 156 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 ERMNQ8TAM6 284 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 CACTINQ8WUQ7 758 aaKnown RBP3.38□□□□□ -1.87
TCOF1-208ENST00000506063 OR1E3Q8WZA6 343 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 SAAL1Q96ER3 474 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 AGAP3Q96P47 875 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 TAAR6Q96RI8 345 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 DDX50Q9BQ39 737 aaKnown RBP3.38□□□□□ -1.87
TCOF1-208ENST00000506063 FAM213AQ9BRX8 229 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 TRIM56Q9BRZ2 755 aaKnown RBP3.38□□□□□ -1.87
TCOF1-208ENST00000506063 MENTQ9BUN1 341 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 STRA6Q9BX79 667 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 TMEM168Q9H0V1 697 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 SNX25Q9H3E2 840 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 SMYD3Q9H7B4 428 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 PNPLA8Q9NP80 782 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 STIM2Q9P246 746 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 SFMBT1Q9UHJ3 866 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 VPS51Q9UID3 782 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 NAP1L2Q9ULW6 460 aaPredicted RBP3.38□□□□□ -1.87
TCOF1-208ENST00000506063 ITM2BQ9Y287 266 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 HBS1LQ9Y450 684 aaKnown RBP3.38□□□□□ -1.87
TCOF1-208ENST00000506063 PCDHGC4Q9Y5F7 938 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 OR51B4Q9Y5P0 310 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 WASF2Q9Y6W5 498 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 ATP8B3O60423 1300 aa3.38□□□□□ -1.87
TCOF1-208ENST00000506063 YLPM1P49750 1951 aaKnown RBP3.38□□□□□ -1.87
TCOF1-208ENST00000506063 SCN2AQ99250 2005 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 CCDC78A2IDD5 438 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 A8MU76 341 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 H0YCG3 227 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 H7C1Q1 480 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 K7ENM7 598 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 KPNA3O00505 521 aaPredicted RBP3.37□□□□□ -1.87
TCOF1-208ENST00000506063 TOR1BO14657 336 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 AREL1O15033 823 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 IRAK2O43187 625 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 CUTAO60888 179 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 ATE1O95260 518 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 NDUFA10O95299 355 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 ECEL1O95672 775 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 STAU1O95793 577 aaKnown RBP3.37□□□□□ -1.87
TCOF1-208ENST00000506063 MT-CO1P00395 513 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 PRR29P0C7W0 189 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 RALAP11233 206 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 CTSEP14091 401 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 CD19P15391 556 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 EGR1P18146 543 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 MAN1A1P33908 653 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 PEX5P50542 639 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 SH3BP2P78314 561 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 DNM1Q05193 864 aaKnown RBP3.37□□□□□ -1.87
TCOF1-208ENST00000506063 MYBPC3Q14896 1274 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 NFATC4Q14934 902 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 IRF4Q15306 451 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 IL17AQ16552 155 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 DEFB113Q30KQ7 82 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 RAB41Q5JT25 222 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 LYPLAL1Q5VWZ2 237 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 HGSNATQ68CP4 663 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 HAUS3Q68CZ6 603 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 ANKRD40Q6AI12 368 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 SLFN12LQ6IEE8 588 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 LCN10Q6JVE6 187 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 MTFR2Q6P444 385 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 FAM199XQ6PEV8 388 aaPredicted RBP3.37□□□□□ -1.87
TCOF1-208ENST00000506063 PODNL1Q6PEZ8 512 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 WDR74Q6RFH5 385 aaPredicted RBP3.37□□□□□ -1.87
TCOF1-208ENST00000506063 IGFL2Q6UWQ7 119 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 SPOCD1Q6ZMY3 1216 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 C16orf47Q6ZP98 133 aaPredicted RBP3.37□□□□□ -1.87
TCOF1-208ENST00000506063 CENPQQ7L2Z9 268 aaPredicted RBP3.37□□□□□ -1.87
TCOF1-208ENST00000506063 VPS36Q86VN1 386 aa3.37□□□□□ -1.87
TCOF1-208ENST00000506063 WDR49Q8IV35 697 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms