RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 ACVRL1P37023 503 aa14.19□□□□□ -0.14
TCOF1-207ENST00000504761 CLCN5P51795 746 aa14.19□□□□□ -0.14
TCOF1-207ENST00000504761 ZNF252P-AS1Q0IIN9 211 aa14.19□□□□□ -0.14
TCOF1-207ENST00000504761 LRRC73Q5JTD7 316 aa14.19□□□□□ -0.14
TCOF1-207ENST00000504761 ADGRD1Q6QNK2 874 aa14.19□□□□□ -0.14
TCOF1-207ENST00000504761 EFL1Q7Z2Z2 1120 aaKnown RBP14.19□□□□□ -0.14
TCOF1-207ENST00000504761 SCUBE1Q8IWY4 988 aa14.19□□□□□ -0.14
TCOF1-207ENST00000504761 CHPFQ8IZ52 775 aa14.19□□□□□ -0.14
TCOF1-207ENST00000504761 CXorf38Q8TB03 319 aa14.19□□□□□ -0.14
TCOF1-207ENST00000504761 HAPLN3Q96S86 360 aa14.19□□□□□ -0.14
TCOF1-207ENST00000504761 ARL15Q9NXU5 204 aa14.19□□□□□ -0.14
TCOF1-207ENST00000504761 KIAA1522Q9P206 1035 aaPredicted RBP14.19□□□□□ -0.14
TCOF1-207ENST00000504761 MAST2Q6P0Q8 1798 aa14.19□□□□□ -0.14
TCOF1-207ENST00000504761 MGEA5O60502 916 aa14.19□□□□□ -0.14
TCOF1-207ENST00000504761 OR56A5P0C7T3 313 aa14.19□□□□□ -0.14
TCOF1-207ENST00000504761 ZNF460Q14592 562 aa14.19□□□□□ -0.14
TCOF1-207ENST00000504761 PHACTR4Q8IZ21 702 aa14.19□□□□□ -0.14
TCOF1-207ENST00000504761 HGH1Q9BTY7 390 aa14.19□□□□□ -0.14
TCOF1-207ENST00000504761 OSBPL1AQ9BXW6 950 aa14.19□□□□□ -0.14
TCOF1-207ENST00000504761 CNTN6Q9UQ52 1028 aa14.19□□□□□ -0.14
TCOF1-207ENST00000504761 UBR3Q6ZT12 1888 aa14.19□□□□□ -0.14
TCOF1-207ENST00000504761 SLCO1B7G3V0H7 640 aa14.19□□□□□ -0.14
TCOF1-207ENST00000504761 DNM1LO00429 736 aa14.19□□□□□ -0.14
TCOF1-207ENST00000504761 RAD51BO15315 384 aa14.19□□□□□ -0.14
TCOF1-207ENST00000504761 SLC2A4P14672 509 aa14.19□□□□□ -0.14
TCOF1-207ENST00000504761 PTPN4P29074 926 aa14.19□□□□□ -0.14
TCOF1-207ENST00000504761 SCNN1AP37088 669 aa14.19□□□□□ -0.14
TCOF1-207ENST00000504761 EME1Q96AY2 570 aa14.19□□□□□ -0.14
TCOF1-207ENST00000504761 DNAJC1Q96KC8 554 aaKnown RBP14.19□□□□□ -0.14
TCOF1-207ENST00000504761 C17orf80Q9BSJ5 609 aa14.19□□□□□ -0.14
TCOF1-207ENST00000504761 SYNDIG1Q9H7V2 258 aa14.19□□□□□ -0.14
TCOF1-207ENST00000504761 COG4Q9H9E3 785 aa14.19□□□□□ -0.14
TCOF1-207ENST00000504761 HBS1LQ9Y450 684 aaKnown RBP14.19□□□□□ -0.14
TCOF1-207ENST00000504761 PDE5AO76074 875 aa14.18□□□□□ -0.14
TCOF1-207ENST00000504761 NDST3O95803 873 aa14.18□□□□□ -0.14
TCOF1-207ENST00000504761 KRT16P08779 473 aa14.18□□□□□ -0.14
TCOF1-207ENST00000504761 EPHA3P29320 983 aa14.18□□□□□ -0.14
TCOF1-207ENST00000504761 GCKP35557 465 aa14.18□□□□□ -0.14
TCOF1-207ENST00000504761 RPL14P50914 215 aaKnown RBP14.18□□□□□ -0.14
TCOF1-207ENST00000504761 CBX2Q14781 532 aaPredicted RBP14.18□□□□□ -0.14
TCOF1-207ENST00000504761 CRY1Q16526 586 aa14.18□□□□□ -0.14
TCOF1-207ENST00000504761 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.18□□□□□ -0.14
TCOF1-207ENST00000504761 CNKSR3Q6P9H4 555 aa14.18□□□□□ -0.14
TCOF1-207ENST00000504761 CNSTQ6PJW8 725 aa14.18□□□□□ -0.14
TCOF1-207ENST00000504761 DNAJC14Q6Y2X3 702 aaPredicted RBP14.18□□□□□ -0.14
TCOF1-207ENST00000504761 SNX32Q86XE0 403 aa14.18□□□□□ -0.14
TCOF1-207ENST00000504761 C3orf58Q8NDZ4 430 aa14.18□□□□□ -0.14
TCOF1-207ENST00000504761 TRPV1Q8NER1 839 aa14.18□□□□□ -0.14
TCOF1-207ENST00000504761 STAG3L4Q8TBR4 150 aa14.18□□□□□ -0.14
TCOF1-207ENST00000504761 SERAC1Q96JX3 654 aa14.18□□□□□ -0.14
TCOF1-207ENST00000504761 ECSITQ9BQ95 431 aa14.18□□□□□ -0.14
TCOF1-207ENST00000504761 PNPOQ9NVS9 261 aa14.18□□□□□ -0.14
TCOF1-207ENST00000504761 GID8Q9NWU2 228 aa14.18□□□□□ -0.14
TCOF1-207ENST00000504761 SEC24DO94855 1032 aaPredicted RBP14.18□□□□□ -0.14
TCOF1-207ENST00000504761 TM4SF4P48230 202 aa14.18□□□□□ -0.14
TCOF1-207ENST00000504761 RARS2Q5T160 578 aaKnown RBP14.18□□□□□ -0.14
TCOF1-207ENST00000504761 FNDC5Q8NAU1 212 aa14.18□□□□□ -0.14
TCOF1-207ENST00000504761 MTFMTQ96DP5 389 aaKnown RBP14.18□□□□□ -0.14
TCOF1-207ENST00000504761 TMLHEQ9NVH6 421 aa14.18□□□□□ -0.14
TCOF1-207ENST00000504761 TDRKHQ9Y2W6 561 aaKnown RBP14.18□□□□□ -0.14
TCOF1-207ENST00000504761 PER2O15055 1255 aa14.18□□□□□ -0.14
TCOF1-207ENST00000504761 INPP4BO15327 924 aa14.18□□□□□ -0.14
TCOF1-207ENST00000504761 HLA-DQB2P05538 268 aa14.18□□□□□ -0.14
TCOF1-207ENST00000504761 TTPAP49638 278 aa14.18□□□□□ -0.14
TCOF1-207ENST00000504761 CXCR3P49682 368 aa14.18□□□□□ -0.14
TCOF1-207ENST00000504761 CDH4P55283 916 aa14.18□□□□□ -0.14
TCOF1-207ENST00000504761 SGCGQ13326 291 aa14.18□□□□□ -0.14
TCOF1-207ENST00000504761 SPDYE7PQ495Y7 208 aa14.18□□□□□ -0.14
TCOF1-207ENST00000504761 AFTPHQ6ULP2 937 aa14.18□□□□□ -0.14
TCOF1-207ENST00000504761 ARHGAP36Q6ZRI8 547 aa14.18□□□□□ -0.14
TCOF1-207ENST00000504761 C14orf80Q86SX3 495 aa14.18□□□□□ -0.14
TCOF1-207ENST00000504761 LRRTM3Q86VH5 581 aa14.18□□□□□ -0.14
TCOF1-207ENST00000504761 TRIML2Q8N7C3 387 aa14.18□□□□□ -0.14
TCOF1-207ENST00000504761 ACMSDQ8TDX5 336 aa14.18□□□□□ -0.14
TCOF1-207ENST00000504761 PLLPQ9Y342 182 aa14.18□□□□□ -0.14
TCOF1-207ENST00000504761 STARD13Q9Y3M8 1113 aa14.18□□□□□ -0.14
TCOF1-207ENST00000504761 CXorf49A8MYA2 514 aaPredicted RBP14.17□□□□□ -0.14
TCOF1-207ENST00000504761 PCNAP12004 261 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 ATP5F1P24539 256 aaPredicted RBP14.17□□□□□ -0.14
TCOF1-207ENST00000504761 KLF1Q13351 362 aaPredicted RBP14.17□□□□□ -0.14
TCOF1-207ENST00000504761 SEMA5AQ13591 1074 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 MPPE1Q53F39 396 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 TCHHL1Q5QJ38 904 aaPredicted RBP14.17□□□□□ -0.14
TCOF1-207ENST00000504761 FSTL4Q6MZW2 842 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 TP53INP2Q8IXH6 220 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 TTC9BQ8N6N2 239 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 CEP70Q8NHQ1 597 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 ZNF461Q8TAF7 563 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 PXYLP1Q8TE99 480 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 PIK3R5Q8WYR1 880 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 SLCO2A1Q92959 643 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 NXNL1Q96CM4 212 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 ASPSCR1Q9BZE9 553 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 ING2Q9H160 280 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 MAGEH1Q9H213 219 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 NMUR1Q9HB89 426 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 EIF3LQ9Y262 564 aaKnown RBP14.17□□□□□ -0.14
TCOF1-207ENST00000504761 OR51F1A6NGY5 319 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 SNAP91O60641 907 aa14.17□□□□□ -0.14
TCOF1-207ENST00000504761 EDF1O60869 148 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms