RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 PNPLA8Q9NP80 782 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 CISHQ9NSE2 258 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 IPO11Q9UI26 975 aaKnown RBP3.71□□□□□ -1.82
USP46-205ENST00000504078 SLC25A13Q9UJS0 675 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 DMTF1Q9Y222 760 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 TP53TG5Q9Y2B4 290 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 HBS1LQ9Y450 684 aaKnown RBP3.71□□□□□ -1.82
USP46-205ENST00000504078 ACTL7AQ9Y615 435 aa3.71□□□□□ -1.82
USP46-205ENST00000504078 ANKRD36A6QL64 1941 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 LRP4O75096 1905 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 A0A1W2PQM1 296 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 EME2A4GXA9 379 aaPredicted RBP3.7□□□□□ -1.82
USP46-205ENST00000504078 LRRC10BA6NIK2 292 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 XPO1O14980 1071 aaKnown RBP3.7□□□□□ -1.82
USP46-205ENST00000504078 SMAD6O43541 496 aaKnown RBP3.7□□□□□ -1.82
USP46-205ENST00000504078 PRMT3O60678 531 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 SEMA7AO75326 666 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 MOCS3O95396 460 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 ADCY5O95622 1261 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 PAK4O96013 591 aaPredicted RBP3.7□□□□□ -1.82
USP46-205ENST00000504078 MT-CO1P00395 513 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 LTFP02788 710 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 CSF2P04141 144 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 ANXA6P08133 673 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 SRPRAP08240 638 aaKnown RBP3.7□□□□□ -1.82
USP46-205ENST00000504078 CCL4P13236 92 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 NME1P15531 152 aaKnown RBP3.7□□□□□ -1.82
USP46-205ENST00000504078 TSHRP16473 764 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 PCSK2P16519 638 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 TRIM21P19474 475 aaKnown RBP3.7□□□□□ -1.82
USP46-205ENST00000504078 POU3F2P20265 443 aaPredicted RBP3.7□□□□□ -1.82
USP46-205ENST00000504078 CES1P23141 567 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 MPSTP25325 297 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 TNFRSF8P28908 595 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 ADMP35318 185 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 CASRP41180 1078 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 CCR10P46092 362 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 PPM1FP49593 454 aaPredicted RBP3.7□□□□□ -1.82
USP46-205ENST00000504078 DNA2P51530 1060 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 VAMP7P51809 220 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 HNRNPKP61978 463 aaKnown RBP eCLIP3.7□□□□□ -1.82
USP46-205ENST00000504078 BST2Q10589 180 aaKnown RBP3.7□□□□□ -1.82
USP46-205ENST00000504078 OVGP1Q12889 678 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 C16orf72Q14CZ0 275 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 DLG2Q15700 870 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 SGSM1Q2NKQ1 1148 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 AMZ1Q400G9 498 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 ZC3H12AQ5D1E8 599 aaKnown RBP3.7□□□□□ -1.82
USP46-205ENST00000504078 DCAF17Q5H9S7 520 aaPredicted RBP3.7□□□□□ -1.82
USP46-205ENST00000504078 RAB41Q5JT25 222 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 HP1BP3Q5SSJ5 553 aaPredicted RBP3.7□□□□□ -1.82
USP46-205ENST00000504078 MSANTD2Q6P1R3 559 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 C22orf39Q6P5X5 142 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 BORAQ6PGQ7 559 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 LEKR1Q6ZMV7 388 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 UNC13DQ70J99 1090 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 PARS2Q7L3T8 475 aaKnown RBP3.7□□□□□ -1.82
USP46-205ENST00000504078 RD3Q7Z3Z2 195 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 BRAPQ7Z569 592 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 TFAP2DQ7Z6R9 452 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 ABI3BPQ7Z7G0 1075 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 IQCHQ86VS3 1027 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 CCNJLQ8IV13 435 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 HID1Q8IV36 788 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 CCDC117Q8IWD4 279 aaPredicted RBP3.7□□□□□ -1.82
USP46-205ENST00000504078 SHISA5Q8N114 240 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 CCAR2Q8N163 923 aaKnown RBP3.7□□□□□ -1.82
USP46-205ENST00000504078 NETO2Q8NC67 525 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 FIBINQ8TAL6 211 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 ZNF507Q8TCN5 953 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 KAT5Q92993 513 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 MIB2Q96AX9 1013 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 PDXPQ96GD0 296 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 LIN37Q96GY3 246 aaPredicted RBP3.7□□□□□ -1.82
USP46-205ENST00000504078 BMFQ96LC9 184 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 GFM1Q96RP9 751 aaKnown RBP3.7□□□□□ -1.82
USP46-205ENST00000504078 DUSP23Q9BVJ7 150 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 CLPBQ9H078 707 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 SAP130Q9H0E3 1048 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 TNMDQ9H2S6 317 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 SEMA6CQ9H3T2 930 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 ZSCAN16Q9H4T2 348 aaPredicted RBP3.7□□□□□ -1.82
USP46-205ENST00000504078 ZDHHC6Q9H6R6 413 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 FAM204AQ9H8W3 233 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 RDH14Q9HBH5 336 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 DYRK4Q9NR20 520 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 OLA1Q9NTK5 396 aaKnown RBP3.7□□□□□ -1.82
USP46-205ENST00000504078 EXOC1Q9NV70 894 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 GEMIN8Q9NWZ8 242 aaKnown RBP3.7□□□□□ -1.82
USP46-205ENST00000504078 SEPT10Q9P0V9 454 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 HESX1Q9UBX0 185 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 STOML2Q9UJZ1 356 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 VPS28Q9UK41 221 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 VANGL2Q9ULK5 521 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 PADI4Q9UM07 663 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 SOX13Q9UN79 622 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 MAPK8IP1Q9UQF2 711 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 NAALADL1Q9UQQ1 740 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 COQ6Q9Y2Z9 468 aa3.7□□□□□ -1.82
USP46-205ENST00000504078 SRPRBQ9Y5M8 271 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms