RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 TOR1BO14657 336 aa12.08□□□□□ -0.48
MED28-203ENST00000503945 INSIG1O15503 277 aa12.08□□□□□ -0.48
MED28-203ENST00000503945 PRAMEF11O60813 436 aa12.08□□□□□ -0.48
MED28-203ENST00000503945 CKMT1AP12532 417 aa12.08□□□□□ -0.48
MED28-203ENST00000503945 JUNDP17535 347 aa12.08□□□□□ -0.48
MED28-203ENST00000503945 ERCC2P18074 760 aa12.08□□□□□ -0.48
MED28-203ENST00000503945 ITIH2P19823 946 aa12.08□□□□□ -0.48
MED28-203ENST00000503945 PCK1P35558 622 aa12.08□□□□□ -0.48
MED28-203ENST00000503945 CSNK1DP48730 415 aa12.08□□□□□ -0.48
MED28-203ENST00000503945 YPEL5P62699 121 aa12.08□□□□□ -0.48
MED28-203ENST00000503945 PIGHQ14442 188 aaPredicted RBP12.08□□□□□ -0.48
MED28-203ENST00000503945 RFTN1Q14699 578 aaPredicted RBP12.08□□□□□ -0.48
MED28-203ENST00000503945 CA9Q16790 459 aa12.08□□□□□ -0.48
MED28-203ENST00000503945 TMEM52BQ4KMG9 183 aa12.08□□□□□ -0.48
MED28-203ENST00000503945 ERAP2Q6P179 960 aa12.08□□□□□ -0.48
MED28-203ENST00000503945 BRAT1Q6PJG6 821 aa12.08□□□□□ -0.48
MED28-203ENST00000503945 SRLQ86TD4 932 aa12.08□□□□□ -0.48
MED28-203ENST00000503945 LUZP1Q86V48 1076 aa12.08□□□□□ -0.48
MED28-203ENST00000503945 PARGQ86W56 976 aa12.08□□□□□ -0.48
MED28-203ENST00000503945 CACTIN-AS1Q8N1I8 211 aa12.08□□□□□ -0.48
MED28-203ENST00000503945 PAF1Q8N7H5 531 aa12.08□□□□□ -0.48
MED28-203ENST00000503945 DENND6BQ8NEG7 585 aa12.08□□□□□ -0.48
MED28-203ENST00000503945 IQCDQ96DY2 449 aa12.08□□□□□ -0.48
MED28-203ENST00000503945 EXOC2Q96KP1 924 aa12.08□□□□□ -0.48
MED28-203ENST00000503945 TUBGCP5Q96RT8 1024 aa12.08□□□□□ -0.48
MED28-203ENST00000503945 UBL7Q96S82 380 aaPredicted RBP12.08□□□□□ -0.48
MED28-203ENST00000503945 FUCA2Q9BTY2 467 aa12.08□□□□□ -0.48
MED28-203ENST00000503945 SNRNP25Q9BV90 132 aaKnown RBP12.08□□□□□ -0.48
MED28-203ENST00000503945 PRORYQ9H606 182 aa12.08□□□□□ -0.48
MED28-203ENST00000503945 USP29Q9HBJ7 922 aa12.08□□□□□ -0.48
MED28-203ENST00000503945 CWC15Q9P013 229 aaKnown RBP12.08□□□□□ -0.48
MED28-203ENST00000503945 GGT7Q9UJ14 662 aa12.08□□□□□ -0.48
MED28-203ENST00000503945 CLCA2Q9UQC9 943 aa12.08□□□□□ -0.48
MED28-203ENST00000503945 ITM2BQ9Y287 266 aa12.08□□□□□ -0.48
MED28-203ENST00000503945 LUC7L2Q9Y383 392 aaKnown RBP12.08□□□□□ -0.48
MED28-203ENST00000503945 K7ESM1 405 aa12.07□□□□□ -0.48
MED28-203ENST00000503945 BUB1BO60566 1050 aaPredicted RBP12.07□□□□□ -0.48
MED28-203ENST00000503945 SERPING1P05155 500 aa12.07□□□□□ -0.48
MED28-203ENST00000503945 NME1P15531 152 aaKnown RBP12.07□□□□□ -0.48
MED28-203ENST00000503945 PTMSP20962 102 aa12.07□□□□□ -0.48
MED28-203ENST00000503945 EIF4A3P38919 411 aaKnown RBP12.07□□□□□ -0.48
MED28-203ENST00000503945 ARL4AP40617 200 aa12.07□□□□□ -0.48
MED28-203ENST00000503945 RENBPP51606 427 aa12.07□□□□□ -0.48
MED28-203ENST00000503945 PFN3P60673 137 aa12.07□□□□□ -0.48
MED28-203ENST00000503945 ZBED6P86452 979 aa12.07□□□□□ -0.48
MED28-203ENST00000503945 IL10RBQ08334 325 aa12.07□□□□□ -0.48
MED28-203ENST00000503945 RTP5Q14D33 572 aa12.07□□□□□ -0.48
MED28-203ENST00000503945 LRRC14Q15048 493 aa12.07□□□□□ -0.48
MED28-203ENST00000503945 TDRD12Q587J7 1177 aaKnown RBP12.07□□□□□ -0.48
MED28-203ENST00000503945 LRRC73Q5JTD7 316 aa12.07□□□□□ -0.48
MED28-203ENST00000503945 FAXCQ5TGI0 409 aa12.07□□□□□ -0.48
MED28-203ENST00000503945 HES3Q5TGS1 186 aa12.07□□□□□ -0.48
MED28-203ENST00000503945 LRRC69Q6ZNQ3 347 aa12.07□□□□□ -0.48
MED28-203ENST00000503945 CAMK1DQ8IU85 385 aa12.07□□□□□ -0.48
MED28-203ENST00000503945 FAM181AQ8N9Y4 354 aa12.07□□□□□ -0.48
MED28-203ENST00000503945 VOPP1Q96AW1 172 aa12.07□□□□□ -0.48
MED28-203ENST00000503945 NXPE2Q96DL1 559 aa12.07□□□□□ -0.48
MED28-203ENST00000503945 APOLD1Q96LR9 279 aa12.07□□□□□ -0.48
MED28-203ENST00000503945 PEBP4Q96S96 227 aa12.07□□□□□ -0.48
MED28-203ENST00000503945 KCTD15Q96SI1 283 aaPredicted RBP12.07□□□□□ -0.48
MED28-203ENST00000503945 IL12RB2Q99665 862 aa12.07□□□□□ -0.48
MED28-203ENST00000503945 WRAP53Q9BUR4 548 aaKnown RBP12.07□□□□□ -0.48
MED28-203ENST00000503945 CINPQ9BW66 212 aaPredicted RBP12.07□□□□□ -0.48
MED28-203ENST00000503945 SLC13A1Q9BZW2 595 aa12.07□□□□□ -0.48
MED28-203ENST00000503945 TRIM7Q9C029 511 aa12.07□□□□□ -0.48
MED28-203ENST00000503945 NRSN2Q9GZP1 204 aa12.07□□□□□ -0.48
MED28-203ENST00000503945 ATP13A3Q9H7F0 1226 aa12.07□□□□□ -0.48
MED28-203ENST00000503945 SP110Q9HB58 689 aa12.07□□□□□ -0.48
MED28-203ENST00000503945 GPR27Q9NS67 375 aa12.07□□□□□ -0.48
MED28-203ENST00000503945 NCKIPSDQ9NZQ3 722 aa12.07□□□□□ -0.48
MED28-203ENST00000503945 SPASTQ9UBP0 616 aa12.07□□□□□ -0.48
MED28-203ENST00000503945 LHX3Q9UBR4 397 aa12.07□□□□□ -0.48
MED28-203ENST00000503945 CAPN11Q9UMQ6 739 aa12.07□□□□□ -0.48
MED28-203ENST00000503945 H3BRJ5 948 aa12.06□□□□□ -0.48
MED28-203ENST00000503945 MYO1FO00160 1098 aa12.06□□□□□ -0.48
MED28-203ENST00000503945 RIOK3O14730 519 aaKnown RBP12.06□□□□□ -0.48
MED28-203ENST00000503945 TPP1O14773 563 aa12.06□□□□□ -0.48
MED28-203ENST00000503945 SPINT1O43278 529 aa12.06□□□□□ -0.48
MED28-203ENST00000503945 AQP9O43315 295 aa12.06□□□□□ -0.48
MED28-203ENST00000503945 LZTS3O60299 673 aaPredicted RBP12.06□□□□□ -0.48
MED28-203ENST00000503945 LRCH4O75427 683 aa12.06□□□□□ -0.48
MED28-203ENST00000503945 C1QL1O75973 258 aa12.06□□□□□ -0.48
MED28-203ENST00000503945 NEBLO76041 1014 aa12.06□□□□□ -0.48
MED28-203ENST00000503945 PIGNO95427 931 aa12.06□□□□□ -0.48
MED28-203ENST00000503945 MT-CO3P00414 261 aa12.06□□□□□ -0.48
MED28-203ENST00000503945 TPM3P06753 285 aa12.06□□□□□ -0.48
MED28-203ENST00000503945 HTR1BP28222 390 aa12.06□□□□□ -0.48
MED28-203ENST00000503945 SERPINA4P29622 427 aa12.06□□□□□ -0.48
MED28-203ENST00000503945 PEX5P50542 639 aa12.06□□□□□ -0.48
MED28-203ENST00000503945 SCNN1BP51168 640 aa12.06□□□□□ -0.48
MED28-203ENST00000503945 BLKP51451 505 aa12.06□□□□□ -0.48
MED28-203ENST00000503945 BCL2L1Q07817 233 aa12.06□□□□□ -0.48
MED28-203ENST00000503945 C19orf57Q0VDD7 668 aa12.06□□□□□ -0.48
MED28-203ENST00000503945 TMCO4Q5TGY1 634 aa12.06□□□□□ -0.48
MED28-203ENST00000503945 AFMIDQ63HM1 303 aa12.06□□□□□ -0.48
MED28-203ENST00000503945 E4F1Q66K89 784 aaPredicted RBP12.06□□□□□ -0.48
MED28-203ENST00000503945 TSEN2Q8NCE0 465 aaKnown RBP12.06□□□□□ -0.48
MED28-203ENST00000503945 LMX1AQ8TE12 382 aa12.06□□□□□ -0.48
MED28-203ENST00000503945 SCG3Q8WXD2 468 aaKnown RBP12.06□□□□□ -0.48
MED28-203ENST00000503945 RFFLQ8WZ73 363 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms