RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 PCDH9Q9HC56 1237 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 POLD4Q9HCU8 107 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 C20orf96Q9NUD7 363 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 POLR3BQ9NW08 1133 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 HOXC10Q9NYD6 342 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 ATP6V1HQ9UI12 483 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 GRIP1Q9Y3R0 1128 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 LOC285095A0A1B0GVY8 99 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 SFI1A8K8P3 1242 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 B4E1Z4 1266 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 M0R3G1 203 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 SH3BP5O60239 455 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 RNASEH1O60930 286 aaKnown RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 NOS1APO75052 506 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 SNNO75324 88 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 TRIM3O75382 744 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 RSL1D1O76021 490 aaKnown RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 HMGN1P05114 100 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 MYL3P08590 195 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 IMPDH1P20839 514 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 IFNA8P32881 189 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 IGHMBP2P38935 993 aaKnown RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 WNT7BP56706 349 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 TMPRSS15P98073 1019 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 FOLH1Q04609 750 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 PTK2Q05397 1052 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 KCNH2Q12809 1159 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 COX10Q12887 443 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 LRRC14Q15048 493 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 C6orf52Q5T4I8 152 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 TMEM150AQ86TG1 271 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 CLVS1Q8IUQ0 354 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 RHOT1Q8IXI2 618 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 ELMOD1Q8N336 334 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 FBXW8Q8N3Y1 598 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 TOP6BLQ8N6T0 577 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 PTCD2Q8WV60 388 aaKnown RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 CCDC124Q96CT7 223 aaKnown RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 SLC45A3Q96JT2 553 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 DEPDC7Q96QD5 511 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 AS3MTQ9HBK9 375 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 CCNB1IP1Q9NPC3 277 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 MRPL39Q9NYK5 338 aaKnown RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 SPO11Q9Y5K1 396 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 RAI1Q7Z5J4 1906 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 ARID1BQ8NFD5 2236 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 PDZK1P1A8MUH7 402 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 KPNA7A9QM74 516 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 KLRF2D3W0D1 207 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 GNPATO15228 680 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 PLEKHA8P1O95397 391 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 MED26O95402 600 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 WDPCPO95876 746 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 TGM6O95932 706 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 WNT2P09544 360 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 ATP6V1B1P15313 513 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 DPEP1P16444 411 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 IDUAP35475 653 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 TRIM23P36406 574 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 ST13P50502 369 aaKnown RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 IST1P53990 364 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 MYBPC1Q00872 1141 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 PRKCQQ04759 706 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 GFPT1Q06210 699 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 CDC20Q12834 499 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 KCTD2Q14681 263 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 ZNF174Q15697 407 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 TYSND1Q2T9J0 566 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 MYLK3Q32MK0 819 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 PPM1LQ5SGD2 360 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 HP1BP3Q5SSJ5 553 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 TTC33Q6PID6 262 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 GRAMD1CQ8IYS0 662 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 KIAA0319LQ8IZA0 1049 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 REXO1Q8N1G1 1221 aaKnown RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 UBE2J2Q8N2K1 259 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 EPS8L3Q8TE67 593 aaKnown RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 SH2D3AQ9BRG2 576 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 UQCC2Q9BRT2 126 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 ACE2Q9BYF1 805 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 SNX25Q9H3E2 840 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 ABHD16BQ9H3Z7 469 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 TCF7L2Q9NQB0 619 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 CREBZFQ9NS37 354 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 CDKN2AIPQ9NXV6 580 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 KANSL3Q9P2N6 904 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 PHF11Q9UIL8 331 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 GRID1Q9ULK0 1009 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 SPEF1Q9Y4P9 236 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 V9GY48 417 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 A0A0U1RQF3 1178 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 ANKRD34BA5PLL1 514 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 C19orf67A6NJJ6 358 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 PSMD12O00232 456 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 BUD23O43709 281 aaKnown RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 H2AFYO75367 372 aaKnown RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 LDHBP07195 334 aaKnown RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 SUPT20HL2P0C7V6 817 aa2.81□□□□□ -1.96
NEDD4-204ENST00000503468 POLR2CP19387 275 aaPredicted RBP2.81□□□□□ -1.96
NEDD4-204ENST00000503468 TPSB2P20231 275 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms