RNA–Protein interactions for RNA: ENST00000502804.2

CXCL1P1-201, Transcript of C-X-C motif chemokine ligand 1 pseudogene 1, humanhuman

BASIC

Gene CXCL1P1, Length 216 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P1-201ENST00000502804 RPS21P63220 83 aaKnown RBP17.11■□□□□ 0.33
CXCL1P1-201ENST00000502804 RACK1P63244 317 aaKnown RBP17.11■□□□□ 0.33
CXCL1P1-201ENST00000502804 ELP6Q0PNE2 266 aa17.11■□□□□ 0.33
CXCL1P1-201ENST00000502804 PRKD1Q15139 912 aaPredicted RBP17.11■□□□□ 0.33
CXCL1P1-201ENST00000502804 LRRC73Q5JTD7 316 aa17.11■□□□□ 0.33
CXCL1P1-201ENST00000502804 ALG1LQ6GMV1 187 aa17.11■□□□□ 0.33
CXCL1P1-201ENST00000502804 B4GALNT4Q76KP1 1039 aa17.11■□□□□ 0.33
CXCL1P1-201ENST00000502804 ZC3H18Q86VM9 953 aaKnown RBP17.11■□□□□ 0.33
CXCL1P1-201ENST00000502804 ZSCAN30Q86W11 494 aa17.11■□□□□ 0.33
CXCL1P1-201ENST00000502804 TRIM58Q8NG06 486 aa17.11■□□□□ 0.33
CXCL1P1-201ENST00000502804 ECHDC3Q96DC8 303 aa17.11■□□□□ 0.33
CXCL1P1-201ENST00000502804 SERAC1Q96JX3 654 aa17.11■□□□□ 0.33
CXCL1P1-201ENST00000502804 NSMCE3Q96MG7 304 aa17.11■□□□□ 0.33
CXCL1P1-201ENST00000502804 HERPUD2Q9BSE4 406 aa17.11■□□□□ 0.33
CXCL1P1-201ENST00000502804 KCNF1Q9H3M0 494 aa17.11■□□□□ 0.33
CXCL1P1-201ENST00000502804 CAPN10Q9HC96 672 aa17.11■□□□□ 0.33
CXCL1P1-201ENST00000502804 SEPT10Q9P0V9 454 aa17.11■□□□□ 0.33
CXCL1P1-201ENST00000502804 ITM2BQ9Y287 266 aa17.11■□□□□ 0.33
CXCL1P1-201ENST00000502804 ATP8A1Q9Y2Q0 1164 aa17.11■□□□□ 0.33
CXCL1P1-201ENST00000502804 PCDHGC4Q9Y5F7 938 aa17.11■□□□□ 0.33
CXCL1P1-201ENST00000502804 SLCO1B1Q9Y6L6 691 aa17.11■□□□□ 0.33
CXCL1P1-201ENST00000502804 USP34Q70CQ2 3546 aa17.11■□□□□ 0.33
CXCL1P1-201ENST00000502804 RALGAPA1Q6GYQ0 2036 aa17.11■□□□□ 0.33
CXCL1P1-201ENST00000502804 LNP1A1A4G5 178 aa17.1■□□□□ 0.33
CXCL1P1-201ENST00000502804 HACD1B0YJ81 288 aa17.1■□□□□ 0.33
CXCL1P1-201ENST00000502804 ZSCAN12O43309 604 aa17.1■□□□□ 0.33
CXCL1P1-201ENST00000502804 SYPP08247 313 aa17.1■□□□□ 0.33
CXCL1P1-201ENST00000502804 ARHGAP8P85298 464 aa17.1■□□□□ 0.33
CXCL1P1-201ENST00000502804 DSC2Q02487 901 aa17.1■□□□□ 0.33
CXCL1P1-201ENST00000502804 ZBTB17Q13105 803 aa17.1■□□□□ 0.33
CXCL1P1-201ENST00000502804 XRCC4Q13426 336 aa17.1■□□□□ 0.33
CXCL1P1-201ENST00000502804 RPS6KA1Q15418 735 aa17.1■□□□□ 0.33
CXCL1P1-201ENST00000502804 TEAD4Q15561 434 aa17.1■□□□□ 0.33
CXCL1P1-201ENST00000502804 ZNF284Q2VY69 593 aa17.1■□□□□ 0.33
CXCL1P1-201ENST00000502804 MEI1Q5TIA1 1274 aa17.1■□□□□ 0.33
CXCL1P1-201ENST00000502804 SEL1L3Q68CR1 1132 aa17.1■□□□□ 0.33
CXCL1P1-201ENST00000502804 NAPEPLDQ6IQ20 393 aa17.1■□□□□ 0.33
CXCL1P1-201ENST00000502804 ERAP2Q6P179 960 aa17.1■□□□□ 0.33
CXCL1P1-201ENST00000502804 ZSWIM9Q86XI8 627 aa17.1■□□□□ 0.33
CXCL1P1-201ENST00000502804 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.1■□□□□ 0.33
CXCL1P1-201ENST00000502804 PDCD6IPQ8WUM4 868 aaKnown RBP17.1■□□□□ 0.33
CXCL1P1-201ENST00000502804 KLK6Q92876 244 aa17.1■□□□□ 0.33
CXCL1P1-201ENST00000502804 SLC6A18Q96N87 628 aa17.1■□□□□ 0.33
CXCL1P1-201ENST00000502804 EDEM2Q9BV94 578 aa17.1■□□□□ 0.33
CXCL1P1-201ENST00000502804 AASDHPPTQ9NRN7 309 aa17.1■□□□□ 0.33
CXCL1P1-201ENST00000502804 GGT7Q9UJ14 662 aa17.1■□□□□ 0.33
CXCL1P1-201ENST00000502804 ZFR2Q9UPR6 939 aaKnown RBP17.1■□□□□ 0.33
CXCL1P1-201ENST00000502804 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.09■□□□□ 0.33
CXCL1P1-201ENST00000502804 GOLGA6L9A6NEM1 432 aa17.09■□□□□ 0.33
CXCL1P1-201ENST00000502804 PRAMEF26H0Y7S4 382 aa17.09■□□□□ 0.33
CXCL1P1-201ENST00000502804 ARHGAP33O14559 1287 aa17.09■□□□□ 0.33
CXCL1P1-201ENST00000502804 SLC31A1O15431 190 aa17.09■□□□□ 0.33
CXCL1P1-201ENST00000502804 SPINT1O43278 529 aa17.09■□□□□ 0.33
CXCL1P1-201ENST00000502804 MTSS1O43312 755 aa17.09■□□□□ 0.33
CXCL1P1-201ENST00000502804 HTRA2O43464 458 aaPredicted RBP17.09■□□□□ 0.33
CXCL1P1-201ENST00000502804 GDF9O60383 454 aa17.09■□□□□ 0.33
CXCL1P1-201ENST00000502804 ENGP17813 658 aa17.09■□□□□ 0.33
CXCL1P1-201ENST00000502804 ITIH2P19823 946 aa17.09■□□□□ 0.33
CXCL1P1-201ENST00000502804 GRIA4P48058 902 aa17.09■□□□□ 0.33
CXCL1P1-201ENST00000502804 CSNK1EP49674 416 aaKnown RBP17.09■□□□□ 0.33
CXCL1P1-201ENST00000502804 ATXN3P54252 364 aaPredicted RBP17.09■□□□□ 0.33
CXCL1P1-201ENST00000502804 OTUD4Q01804 1114 aaKnown RBP17.09■□□□□ 0.33
CXCL1P1-201ENST00000502804 TRAF2Q12933 501 aa17.09■□□□□ 0.33
CXCL1P1-201ENST00000502804 SGCGQ13326 291 aa17.09■□□□□ 0.33
CXCL1P1-201ENST00000502804 NOMO1Q15155 1222 aa17.09■□□□□ 0.33
CXCL1P1-201ENST00000502804 TMEM259Q4ZIN3 620 aa17.09■□□□□ 0.33
CXCL1P1-201ENST00000502804 ADAT2Q7Z6V5 191 aaKnown RBP17.09■□□□□ 0.33
CXCL1P1-201ENST00000502804 CNTD1Q8N815 330 aa17.09■□□□□ 0.33
CXCL1P1-201ENST00000502804 ARRDC2Q8TBH0 407 aa17.09■□□□□ 0.33
CXCL1P1-201ENST00000502804 ACTL9Q8TC94 416 aa17.09■□□□□ 0.33
CXCL1P1-201ENST00000502804 CXorf40AQ8TE69 158 aa17.09■□□□□ 0.33
CXCL1P1-201ENST00000502804 SKA1Q96BD8 255 aa17.09■□□□□ 0.33
CXCL1P1-201ENST00000502804 SLC17A9Q9BYT1 436 aa17.09■□□□□ 0.33
CXCL1P1-201ENST00000502804 CEP41Q9BYV8 373 aa17.09■□□□□ 0.33
CXCL1P1-201ENST00000502804 PCDH12Q9NPG4 1184 aa17.09■□□□□ 0.33
CXCL1P1-201ENST00000502804 FSCN3Q9NQT6 498 aa17.09■□□□□ 0.33
CXCL1P1-201ENST00000502804 RXFP3Q9NSD7 469 aa17.09■□□□□ 0.33
CXCL1P1-201ENST00000502804 PCDHB9Q9Y5E1 797 aa17.09■□□□□ 0.33
CXCL1P1-201ENST00000502804 RAI2Q9Y5P3 530 aa17.09■□□□□ 0.33
CXCL1P1-201ENST00000502804 EP300Q09472 2414 aaPredicted RBP17.08■□□□□ 0.33
CXCL1P1-201ENST00000502804 IGLON5A6NGN9 336 aa17.08■□□□□ 0.32
CXCL1P1-201ENST00000502804 H7C0C1 242 aa17.08■□□□□ 0.32
CXCL1P1-201ENST00000502804 RIOK3O14730 519 aaKnown RBP17.08■□□□□ 0.32
CXCL1P1-201ENST00000502804 CPP00450 1065 aa17.08■□□□□ 0.32
CXCL1P1-201ENST00000502804 PRLRP16471 622 aa17.08■□□□□ 0.32
CXCL1P1-201ENST00000502804 CA4P22748 312 aa17.08■□□□□ 0.32
CXCL1P1-201ENST00000502804 CD38P28907 300 aa17.08■□□□□ 0.32
CXCL1P1-201ENST00000502804 ATP5OP48047 213 aa17.08■□□□□ 0.32
CXCL1P1-201ENST00000502804 FAM193AP78312 1265 aa17.08■□□□□ 0.32
CXCL1P1-201ENST00000502804 NIPAL4Q0D2K0 466 aa17.08■□□□□ 0.32
CXCL1P1-201ENST00000502804 STAT4Q14765 748 aa17.08■□□□□ 0.32
CXCL1P1-201ENST00000502804 TMEM52BQ4KMG9 183 aa17.08■□□□□ 0.32
CXCL1P1-201ENST00000502804 TEX44Q53QW1 395 aa17.08■□□□□ 0.32
CXCL1P1-201ENST00000502804 SLC45A4Q5BKX6 768 aa17.08■□□□□ 0.32
CXCL1P1-201ENST00000502804 ARMC12Q5T9G4 340 aa17.08■□□□□ 0.32
CXCL1P1-201ENST00000502804 SEL1L2Q5TEA6 688 aa17.08■□□□□ 0.32
CXCL1P1-201ENST00000502804 TTC13Q8NBP0 860 aa17.08■□□□□ 0.32
CXCL1P1-201ENST00000502804 NETO1Q8TDF5 533 aa17.08■□□□□ 0.32
CXCL1P1-201ENST00000502804 HTR3CQ8WXA8 447 aa17.08■□□□□ 0.32
CXCL1P1-201ENST00000502804 SPOCK2Q92563 424 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms