RNA–Protein interactions for RNA: ENST00000498628.6

CDKN2A-209, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-209ENST00000498628 ZCCHC8Q6NZY4 707 aaKnown RBP17.14■□□□□ 0.33
CDKN2A-209ENST00000498628 BBS5Q8N3I7 341 aa17.14■□□□□ 0.33
CDKN2A-209ENST00000498628 ARFGAP1Q8N6T3 406 aa17.14■□□□□ 0.33
CDKN2A-209ENST00000498628 NETO2Q8NC67 525 aa17.14■□□□□ 0.33
CDKN2A-209ENST00000498628 ZNF548Q8NEK5 533 aaPredicted RBP17.14■□□□□ 0.33
CDKN2A-209ENST00000498628 APOLD1Q96LR9 279 aa17.14■□□□□ 0.33
CDKN2A-209ENST00000498628 ZNF599Q96NL3 588 aa17.14■□□□□ 0.33
CDKN2A-209ENST00000498628 WRAP53Q9BUR4 548 aaKnown RBP17.14■□□□□ 0.33
CDKN2A-209ENST00000498628 SLC13A1Q9BZW2 595 aa17.14■□□□□ 0.33
CDKN2A-209ENST00000498628 SALL4Q9UJQ4 1053 aa17.14■□□□□ 0.33
CDKN2A-209ENST00000498628 RAXQ9Y2V3 346 aa17.14■□□□□ 0.33
CDKN2A-209ENST00000498628 LUC7L2Q9Y383 392 aaKnown RBP17.14■□□□□ 0.33
CDKN2A-209ENST00000498628 DOCK9Q9BZ29 2069 aa17.13■□□□□ 0.33
CDKN2A-209ENST00000498628 A0A1W2PQ67 120 aa17.13■□□□□ 0.33
CDKN2A-209ENST00000498628 TSPAN11A1L157 253 aa17.13■□□□□ 0.33
CDKN2A-209ENST00000498628 K7ESM1 405 aa17.13■□□□□ 0.33
CDKN2A-209ENST00000498628 MT-CO3P00414 261 aa17.13■□□□□ 0.33
CDKN2A-209ENST00000498628 NFKBIAP25963 317 aa17.13■□□□□ 0.33
CDKN2A-209ENST00000498628 HTR1BP28222 390 aa17.13■□□□□ 0.33
CDKN2A-209ENST00000498628 RPIAP49247 311 aa17.13■□□□□ 0.33
CDKN2A-209ENST00000498628 LRRC14Q15048 493 aa17.13■□□□□ 0.33
CDKN2A-209ENST00000498628 NFKBIBQ15653 356 aa17.13■□□□□ 0.33
CDKN2A-209ENST00000498628 LRRC73Q5JTD7 316 aa17.13■□□□□ 0.33
CDKN2A-209ENST00000498628 FAXCQ5TGI0 409 aa17.13■□□□□ 0.33
CDKN2A-209ENST00000498628 AFMIDQ63HM1 303 aa17.13■□□□□ 0.33
CDKN2A-209ENST00000498628 LUZP1Q86V48 1076 aa17.13■□□□□ 0.33
CDKN2A-209ENST00000498628 LMX1AQ8TE12 382 aa17.13■□□□□ 0.33
CDKN2A-209ENST00000498628 NSMCE1Q8WV22 266 aa17.13■□□□□ 0.33
CDKN2A-209ENST00000498628 TBATAQ96M53 351 aa17.13■□□□□ 0.33
CDKN2A-209ENST00000498628 PEBP4Q96S96 227 aa17.13■□□□□ 0.33
CDKN2A-209ENST00000498628 SCUBE2Q9NQ36 999 aa17.13■□□□□ 0.33
CDKN2A-209ENST00000498628 CWC15Q9P013 229 aaKnown RBP17.13■□□□□ 0.33
CDKN2A-209ENST00000498628 SEPT3Q9UH03 358 aa17.13■□□□□ 0.33
CDKN2A-209ENST00000498628 IP6K2Q9UHH9 426 aa17.13■□□□□ 0.33
CDKN2A-209ENST00000498628 GPSM3Q9Y4H4 160 aa17.13■□□□□ 0.33
CDKN2A-209ENST00000498628 AKAP13Q12802 2813 aa17.13■□□□□ 0.33
CDKN2A-209ENST00000498628 CFAP69A5D8W1 941 aa17.12■□□□□ 0.33
CDKN2A-209ENST00000498628 SPINT1O43278 529 aa17.12■□□□□ 0.33
CDKN2A-209ENST00000498628 ANXA6P08133 673 aa17.12■□□□□ 0.33
CDKN2A-209ENST00000498628 SERPINB6P35237 376 aa17.12■□□□□ 0.33
CDKN2A-209ENST00000498628 IGFALSP35858 605 aa17.12■□□□□ 0.33
CDKN2A-209ENST00000498628 HSPA9P38646 679 aaKnown RBP17.12■□□□□ 0.33
CDKN2A-209ENST00000498628 EIF4A3P38919 411 aaKnown RBP17.12■□□□□ 0.33
CDKN2A-209ENST00000498628 INSM1Q01101 510 aaPredicted RBP17.12■□□□□ 0.33
CDKN2A-209ENST00000498628 PPARDQ03181 441 aa17.12■□□□□ 0.33
CDKN2A-209ENST00000498628 DPYSL2Q16555 572 aa17.12■□□□□ 0.33
CDKN2A-209ENST00000498628 E4F1Q66K89 784 aaPredicted RBP17.12■□□□□ 0.33
CDKN2A-209ENST00000498628 TMCO3Q6UWJ1 677 aa17.12■□□□□ 0.33
CDKN2A-209ENST00000498628 MACC1Q6ZN28 852 aa17.12■□□□□ 0.33
CDKN2A-209ENST00000498628 TPCN2Q8NHX9 752 aa17.12■□□□□ 0.33
CDKN2A-209ENST00000498628 CPLX3Q8WVH0 158 aa17.12■□□□□ 0.33
CDKN2A-209ENST00000498628 SCG3Q8WXD2 468 aaKnown RBP17.12■□□□□ 0.33
CDKN2A-209ENST00000498628 VOPP1Q96AW1 172 aa17.12■□□□□ 0.33
CDKN2A-209ENST00000498628 DEPDC7Q96QD5 511 aa17.12■□□□□ 0.33
CDKN2A-209ENST00000498628 PCDH12Q9NPG4 1184 aa17.12■□□□□ 0.33
CDKN2A-209ENST00000498628 APOBEC3BQ9UH17 382 aaKnown RBP17.12■□□□□ 0.33
CDKN2A-209ENST00000498628 CAPN11Q9UMQ6 739 aa17.12■□□□□ 0.33
CDKN2A-209ENST00000498628 DOLKQ9UPQ8 538 aa17.12■□□□□ 0.33
CDKN2A-209ENST00000498628 ATP8A1Q9Y2Q0 1164 aa17.12■□□□□ 0.33
CDKN2A-209ENST00000498628 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.11■□□□□ 0.33
CDKN2A-209ENST00000498628 MYO1FO00160 1098 aa17.11■□□□□ 0.33
CDKN2A-209ENST00000498628 NEBLO76041 1014 aa17.11■□□□□ 0.33
CDKN2A-209ENST00000498628 GIMD1P0DJR0 217 aa17.11■□□□□ 0.33
CDKN2A-209ENST00000498628 ITIH2P19823 946 aa17.11■□□□□ 0.33
CDKN2A-209ENST00000498628 SCNN1BP51168 640 aa17.11■□□□□ 0.33
CDKN2A-209ENST00000498628 AP1S1P61966 158 aa17.11■□□□□ 0.33
CDKN2A-209ENST00000498628 EIF2B5Q13144 721 aaKnown RBP17.11■□□□□ 0.33
CDKN2A-209ENST00000498628 DPYSQ14117 519 aa17.11■□□□□ 0.33
CDKN2A-209ENST00000498628 ZNF235Q14590 738 aa17.11■□□□□ 0.33
CDKN2A-209ENST00000498628 LBRQ14739 615 aaKnown RBP17.11■□□□□ 0.33
CDKN2A-209ENST00000498628 RTP5Q14D33 572 aa17.11■□□□□ 0.33
CDKN2A-209ENST00000498628 HADHQ16836 314 aaKnown RBP17.11■□□□□ 0.33
CDKN2A-209ENST00000498628 PRRT3Q5FWE3 981 aa17.11■□□□□ 0.33
CDKN2A-209ENST00000498628 LRRC69Q6ZNQ3 347 aa17.11■□□□□ 0.33
CDKN2A-209ENST00000498628 CAMK1DQ8IU85 385 aa17.11■□□□□ 0.33
CDKN2A-209ENST00000498628 ARHGAP12Q8IWW6 846 aa17.11■□□□□ 0.33
CDKN2A-209ENST00000498628 PHACTR4Q8IZ21 702 aa17.11■□□□□ 0.33
CDKN2A-209ENST00000498628 FSTL5Q8N475 847 aaPredicted RBP17.11■□□□□ 0.33
CDKN2A-209ENST00000498628 DCBLD1Q8N8Z6 715 aa17.11■□□□□ 0.33
CDKN2A-209ENST00000498628 TP53I13Q8NBR0 393 aaPredicted RBP17.11■□□□□ 0.33
CDKN2A-209ENST00000498628 TSEN2Q8NCE0 465 aaKnown RBP17.11■□□□□ 0.33
CDKN2A-209ENST00000498628 TEKT4Q8WW24 435 aa17.11■□□□□ 0.33
CDKN2A-209ENST00000498628 HSPH1Q92598 858 aa17.11■□□□□ 0.33
CDKN2A-209ENST00000498628 TRIM7Q9C029 511 aa17.11■□□□□ 0.33
CDKN2A-209ENST00000498628 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.11■□□□□ 0.33
CDKN2A-209ENST00000498628 IGF2RP11717 2491 aa17.11■□□□□ 0.33
CDKN2A-209ENST00000498628 RRP8O43159 456 aaKnown RBP17.1■□□□□ 0.33
CDKN2A-209ENST00000498628 OPA1O60313 960 aa17.1■□□□□ 0.33
CDKN2A-209ENST00000498628 BUB1BO60566 1050 aaPredicted RBP17.1■□□□□ 0.33
CDKN2A-209ENST00000498628 ALPIP09923 528 aa17.1■□□□□ 0.33
CDKN2A-209ENST00000498628 C6P13671 934 aa17.1■□□□□ 0.33
CDKN2A-209ENST00000498628 CTSEP14091 401 aa17.1■□□□□ 0.33
CDKN2A-209ENST00000498628 ACTN2P35609 894 aa17.1■□□□□ 0.33
CDKN2A-209ENST00000498628 LIG3P49916 1009 aa17.1■□□□□ 0.33
CDKN2A-209ENST00000498628 ADKP55263 362 aaKnown RBP17.1■□□□□ 0.33
CDKN2A-209ENST00000498628 CLDN6P56747 220 aa17.1■□□□□ 0.33
CDKN2A-209ENST00000498628 KRT81Q14533 505 aa17.1■□□□□ 0.33
CDKN2A-209ENST00000498628 AGERQ15109 404 aa17.1■□□□□ 0.33
CDKN2A-209ENST00000498628 IRF4Q15306 451 aa17.1■□□□□ 0.33
CDKN2A-209ENST00000498628 ELOCQ15369 112 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms