RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 MAGEB5Q9BZ81 275 aa14.87□□□□□ -0.03
TRAF4-212ENST00000498540 EDEM3Q9BZQ6 932 aa14.87□□□□□ -0.03
TRAF4-212ENST00000498540 TMEM51Q9NW97 253 aa14.87□□□□□ -0.03
TRAF4-212ENST00000498540 OR12D3Q9UGF7 316 aa14.87□□□□□ -0.03
TRAF4-212ENST00000498540 RWDD2AQ9UIY3 292 aa14.87□□□□□ -0.03
TRAF4-212ENST00000498540 GPR34Q9UPC5 381 aa14.87□□□□□ -0.03
TRAF4-212ENST00000498540 BSNQ9UPA5 3926 aa14.86□□□□□ -0.03
TRAF4-212ENST00000498540 COL12A1Q99715 3063 aa14.86□□□□□ -0.03
TRAF4-212ENST00000498540 TOR1BO14657 336 aa14.86□□□□□ -0.03
TRAF4-212ENST00000498540 TMCC1O94876 653 aa14.86□□□□□ -0.03
TRAF4-212ENST00000498540 ITGB2P05107 769 aa14.86□□□□□ -0.03
TRAF4-212ENST00000498540 JMJD7P0C870 316 aa14.86□□□□□ -0.03
TRAF4-212ENST00000498540 LIPCP11150 499 aa14.86□□□□□ -0.03
TRAF4-212ENST00000498540 CTSEP14091 401 aa14.86□□□□□ -0.03
TRAF4-212ENST00000498540 TIMP2P16035 220 aa14.86□□□□□ -0.03
TRAF4-212ENST00000498540 RHOQP17081 205 aa14.86□□□□□ -0.03
TRAF4-212ENST00000498540 ITIH1P19827 911 aa14.86□□□□□ -0.03
TRAF4-212ENST00000498540 BLKP51451 505 aa14.86□□□□□ -0.03
TRAF4-212ENST00000498540 BPIFB4P59827 614 aa14.86□□□□□ -0.03
TRAF4-212ENST00000498540 NRG1Q02297 640 aaPredicted RBP14.86□□□□□ -0.03
TRAF4-212ENST00000498540 CDO1Q16878 200 aa14.86□□□□□ -0.03
TRAF4-212ENST00000498540 C15orf59Q2T9L4 293 aaPredicted RBP14.86□□□□□ -0.03
TRAF4-212ENST00000498540 WSCD2Q2TBF2 565 aa14.86□□□□□ -0.03
TRAF4-212ENST00000498540 SMYD5Q6GMV2 418 aa14.86□□□□□ -0.03
TRAF4-212ENST00000498540 DPY19L2P1Q6NXN4 242 aa14.86□□□□□ -0.03
TRAF4-212ENST00000498540 LVRNQ6Q4G3 990 aa14.86□□□□□ -0.03
TRAF4-212ENST00000498540 RD3Q7Z3Z2 195 aa14.86□□□□□ -0.03
TRAF4-212ENST00000498540 VASH2Q86V25 355 aa14.86□□□□□ -0.03
TRAF4-212ENST00000498540 SCG3Q8WXD2 468 aaKnown RBP14.86□□□□□ -0.03
TRAF4-212ENST00000498540 GDAP1L1Q96MZ0 367 aa14.86□□□□□ -0.03
TRAF4-212ENST00000498540 MAGEH1Q9H213 219 aa14.86□□□□□ -0.03
TRAF4-212ENST00000498540 LRRN3Q9H3W5 708 aa14.86□□□□□ -0.03
TRAF4-212ENST00000498540 METTL5Q9NRN9 209 aaKnown RBP14.86□□□□□ -0.03
TRAF4-212ENST00000498540 TMEM248Q9NWD8 314 aa14.86□□□□□ -0.03
TRAF4-212ENST00000498540 HPCAL4Q9UM19 191 aa14.86□□□□□ -0.03
TRAF4-212ENST00000498540 LOXL2Q9Y4K0 774 aa14.86□□□□□ -0.03
TRAF4-212ENST00000498540 PCDHGA4Q9Y5G9 962 aa14.86□□□□□ -0.03
TRAF4-212ENST00000498540 PRAMEF33A0A0G2JMD5 474 aa14.85□□□□□ -0.03
TRAF4-212ENST00000498540 TMX2-CTNND1H3BSU7 103 aa14.85□□□□□ -0.03
TRAF4-212ENST00000498540 NVLO15381 856 aaKnown RBP14.85□□□□□ -0.03
TRAF4-212ENST00000498540 PRAMEF10O60809 474 aa14.85□□□□□ -0.03
TRAF4-212ENST00000498540 RAMP2O60895 175 aa14.85□□□□□ -0.03
TRAF4-212ENST00000498540 LRIG2O94898 1065 aa14.85□□□□□ -0.03
TRAF4-212ENST00000498540 RASGRP1O95267 797 aa14.85□□□□□ -0.03
TRAF4-212ENST00000498540 WT1P19544 449 aaPredicted RBP14.85□□□□□ -0.03
TRAF4-212ENST00000498540 ADRA1BP35368 520 aa14.85□□□□□ -0.03
TRAF4-212ENST00000498540 ETV5P41161 510 aa14.85□□□□□ -0.03
TRAF4-212ENST00000498540 MTIF2P46199 727 aaKnown RBP14.85□□□□□ -0.03
TRAF4-212ENST00000498540 PEX5P50542 639 aa14.85□□□□□ -0.03
TRAF4-212ENST00000498540 RAPGEF1Q13905 1077 aa14.85□□□□□ -0.03
TRAF4-212ENST00000498540 NFATC4Q14934 902 aa14.85□□□□□ -0.03
TRAF4-212ENST00000498540 LRRC14Q15048 493 aa14.85□□□□□ -0.03
TRAF4-212ENST00000498540 ENPP7Q6UWV6 458 aa14.85□□□□□ -0.03
TRAF4-212ENST00000498540 ATG14Q6ZNE5 492 aa14.85□□□□□ -0.03
TRAF4-212ENST00000498540 NOP9Q86U38 636 aaKnown RBP14.85□□□□□ -0.03
TRAF4-212ENST00000498540 ZFAND4Q86XD8 727 aa14.85□□□□□ -0.03
TRAF4-212ENST00000498540 GKN2Q86XP6 184 aa14.85□□□□□ -0.03
TRAF4-212ENST00000498540 CCNJLQ8IV13 435 aa14.85□□□□□ -0.03
TRAF4-212ENST00000498540 SFTPA2Q8IWL1 248 aa14.85□□□□□ -0.03
TRAF4-212ENST00000498540 Q8N9G6 341 aaPredicted RBP14.85□□□□□ -0.03
TRAF4-212ENST00000498540 CPA5Q8WXQ8 436 aa14.85□□□□□ -0.03
TRAF4-212ENST00000498540 TMEM74Q96NL1 305 aa14.85□□□□□ -0.03
TRAF4-212ENST00000498540 TTYH3Q9C0H2 523 aa14.85□□□□□ -0.03
TRAF4-212ENST00000498540 FOXJ2Q9P0K8 574 aa14.85□□□□□ -0.03
TRAF4-212ENST00000498540 OR1A2Q9Y585 309 aa14.85□□□□□ -0.03
TRAF4-212ENST00000498540 FHOD1Q9Y613 1164 aa14.85□□□□□ -0.03
TRAF4-212ENST00000498540 INSIG1O15503 277 aa14.84□□□□□ -0.03
TRAF4-212ENST00000498540 SUV39H1O43463 412 aa14.84□□□□□ -0.03
TRAF4-212ENST00000498540 BUB1O43683 1085 aa14.84□□□□□ -0.03
TRAF4-212ENST00000498540 KDELR3O43731 214 aa14.84□□□□□ -0.03
TRAF4-212ENST00000498540 LSM8O95777 96 aaKnown RBP14.84□□□□□ -0.03
TRAF4-212ENST00000498540 IGSF6O95976 241 aa14.84□□□□□ -0.03
TRAF4-212ENST00000498540 SRP54P61011 504 aaKnown RBP14.84□□□□□ -0.03
TRAF4-212ENST00000498540 NOMO3P69849 1222 aa14.84□□□□□ -0.03
TRAF4-212ENST00000498540 CYP4F2P78329 520 aa14.84□□□□□ -0.03
TRAF4-212ENST00000498540 SRSF1Q07955 248 aaKnown RBP eCLIP14.84□□□□□ -0.031e-7■■■■□ 23.8
TRAF4-212ENST00000498540 INPP5AQ14642 412 aa14.84□□□□□ -0.03
TRAF4-212ENST00000498540 TMEM52BQ4KMG9 183 aa14.84□□□□□ -0.03
TRAF4-212ENST00000498540 MANEAQ5SRI9 462 aa14.84□□□□□ -0.03
TRAF4-212ENST00000498540 NAA35Q5VZE5 725 aa14.84□□□□□ -0.03
TRAF4-212ENST00000498540 XKR5Q6UX68 686 aa14.84□□□□□ -0.03
TRAF4-212ENST00000498540 ARCQ7LC44 396 aa14.84□□□□□ -0.03
TRAF4-212ENST00000498540 GPR156Q8NFN8 814 aa14.84□□□□□ -0.03
TRAF4-212ENST00000498540 TBC1D31Q96DN5 1066 aa14.84□□□□□ -0.03
TRAF4-212ENST00000498540 PDXPQ96GD0 296 aa14.84□□□□□ -0.03
TRAF4-212ENST00000498540 APOOQ9BUR5 198 aa14.84□□□□□ -0.03
TRAF4-212ENST00000498540 KLC2Q9H0B6 622 aa14.84□□□□□ -0.03
TRAF4-212ENST00000498540 NOL6Q9H6R4 1146 aaKnown RBP14.84□□□□□ -0.03
TRAF4-212ENST00000498540 DKK3Q9UBP4 350 aa14.84□□□□□ -0.03
TRAF4-212ENST00000498540 KLQ9UEF7 1012 aa14.84□□□□□ -0.03
TRAF4-212ENST00000498540 TMEM110-MUSTN1A8MSY1 372 aa14.83□□□□□ -0.04
TRAF4-212ENST00000498540 GADD45BO75293 160 aaPredicted RBP14.83□□□□□ -0.04
TRAF4-212ENST00000498540 PIGNO95427 931 aa14.83□□□□□ -0.04
TRAF4-212ENST00000498540 MMEP08473 750 aa14.83□□□□□ -0.04
TRAF4-212ENST00000498540 HTR1BP28222 390 aa14.83□□□□□ -0.04
TRAF4-212ENST00000498540 RHOAP61586 193 aa14.83□□□□□ -0.04
TRAF4-212ENST00000498540 RAD51Q06609 339 aa14.83□□□□□ -0.04
TRAF4-212ENST00000498540 ZFP36L1Q07352 338 aaKnown RBP14.83□□□□□ -0.04
TRAF4-212ENST00000498540 TBR1Q16650 682 aa14.83□□□□□ -0.04
TRAF4-212ENST00000498540 CCDC14Q49A88 953 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms