RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 PGBD5Q8N414 524 aa12.92□□□□□ -0.34
HSPG2-213ENST00000498495 TEX26Q8N6G2 289 aa12.92□□□□□ -0.34
HSPG2-213ENST00000498495 DEFB124Q8NES8 71 aa12.92□□□□□ -0.34
HSPG2-213ENST00000498495 FAM174AQ8TBP5 190 aa12.92□□□□□ -0.34
HSPG2-213ENST00000498495 SETD7Q8WTS6 366 aaKnown RBP12.92□□□□□ -0.34
HSPG2-213ENST00000498495 TSGA13Q96PP4 275 aa12.92□□□□□ -0.34
HSPG2-213ENST00000498495 NUDCD1Q96RS6 583 aa12.92□□□□□ -0.34
HSPG2-213ENST00000498495 C1QTNF2Q9BXJ5 285 aa12.92□□□□□ -0.34
HSPG2-213ENST00000498495 NT5MQ9NPB1 228 aa12.92□□□□□ -0.34
HSPG2-213ENST00000498495 FZD3Q9NPG1 666 aa12.92□□□□□ -0.34
HSPG2-213ENST00000498495 HAUS2Q9NVX0 235 aa12.92□□□□□ -0.34
HSPG2-213ENST00000498495 RBM22Q9NW64 420 aaKnown RBP eCLIP12.92□□□□□ -0.34
HSPG2-213ENST00000498495 DTLQ9NZJ0 730 aa12.92□□□□□ -0.34
HSPG2-213ENST00000498495 GGT7Q9UJ14 662 aa12.92□□□□□ -0.34
HSPG2-213ENST00000498495 SALL4Q9UJQ4 1053 aa12.92□□□□□ -0.34
HSPG2-213ENST00000498495 ITM2BQ9Y287 266 aa12.92□□□□□ -0.34
HSPG2-213ENST00000498495 FNDC3AQ9Y2H6 1198 aaKnown RBP12.92□□□□□ -0.34
HSPG2-213ENST00000498495 REXO2Q9Y3B8 237 aaKnown RBP12.92□□□□□ -0.34
HSPG2-213ENST00000498495 PCDHB9Q9Y5E1 797 aa12.92□□□□□ -0.34
HSPG2-213ENST00000498495 DUSP10Q9Y6W6 482 aa12.92□□□□□ -0.34
HSPG2-213ENST00000498495 A0A1W2PQ67 120 aa12.91□□□□□ -0.34
HSPG2-213ENST00000498495 TSPAN11A1L157 253 aa12.91□□□□□ -0.34
HSPG2-213ENST00000498495 BTNL10A8MVZ5 291 aa12.91□□□□□ -0.34
HSPG2-213ENST00000498495 RIOK3O14730 519 aaKnown RBP12.91□□□□□ -0.34
HSPG2-213ENST00000498495 PJA2O43164 708 aa12.91□□□□□ -0.34
HSPG2-213ENST00000498495 SH3BP5O60239 455 aa12.91□□□□□ -0.34
HSPG2-213ENST00000498495 THEGLP0DJG4 465 aa12.91□□□□□ -0.34
HSPG2-213ENST00000498495 CCNB1P14635 433 aa12.91□□□□□ -0.34
HSPG2-213ENST00000498495 CR2P20023 1033 aa12.91□□□□□ -0.34
HSPG2-213ENST00000498495 CCT8P50990 548 aa12.91□□□□□ -0.34
HSPG2-213ENST00000498495 CLDN2P57739 230 aa12.91□□□□□ -0.34
HSPG2-213ENST00000498495 NXPH1P58417 271 aa12.91□□□□□ -0.34
HSPG2-213ENST00000498495 FAM193AP78312 1265 aa12.91□□□□□ -0.34
HSPG2-213ENST00000498495 KIF5AQ12840 1032 aa12.91□□□□□ -0.34
HSPG2-213ENST00000498495 TFDP2Q14188 446 aa12.91□□□□□ -0.34
HSPG2-213ENST00000498495 FGL2Q14314 439 aa12.91□□□□□ -0.34
HSPG2-213ENST00000498495 TMEM52BQ4KMG9 183 aa12.91□□□□□ -0.34
HSPG2-213ENST00000498495 SLC9A4Q6AI14 798 aa12.91□□□□□ -0.34
HSPG2-213ENST00000498495 BZW1Q7L1Q6 419 aaKnown RBP12.91□□□□□ -0.34
HSPG2-213ENST00000498495 CCDC13Q8IYE1 715 aa12.91□□□□□ -0.34
HSPG2-213ENST00000498495 PLD5Q8N7P1 536 aa12.91□□□□□ -0.34
HSPG2-213ENST00000498495 TMEM145Q8NBT3 493 aa12.91□□□□□ -0.34
HSPG2-213ENST00000498495 KIAA1524Q8TCG1 905 aa12.91□□□□□ -0.34
HSPG2-213ENST00000498495 PDCD6IPQ8WUM4 868 aaKnown RBP12.91□□□□□ -0.34
HSPG2-213ENST00000498495 LRRN4Q8WUT4 740 aa12.91□□□□□ -0.34
HSPG2-213ENST00000498495 ASB12Q8WXK4 309 aa12.91□□□□□ -0.34
HSPG2-213ENST00000498495 HDAC11Q96DB2 347 aa12.91□□□□□ -0.34
HSPG2-213ENST00000498495 LENG8Q96PV6 779 aaPredicted RBP12.91□□□□□ -0.34
HSPG2-213ENST00000498495 ELF4Q99607 663 aaPredicted RBP12.91□□□□□ -0.34
HSPG2-213ENST00000498495 MGME1Q9BQP7 344 aa12.91□□□□□ -0.34
HSPG2-213ENST00000498495 WRAP53Q9BUR4 548 aaKnown RBP12.91□□□□□ -0.34
HSPG2-213ENST00000498495 LACRTQ9GZZ8 138 aa12.91□□□□□ -0.34
HSPG2-213ENST00000498495 ERVMER34-1Q9H9K5 563 aa12.91□□□□□ -0.34
HSPG2-213ENST00000498495 NOD2Q9HC29 1040 aa12.91□□□□□ -0.34
HSPG2-213ENST00000498495 PCDH12Q9NPG4 1184 aa12.91□□□□□ -0.34
HSPG2-213ENST00000498495 PCDHGC4Q9Y5F7 938 aa12.91□□□□□ -0.34
HSPG2-213ENST00000498495 PCDHGB2Q9Y5G2 931 aa12.91□□□□□ -0.34
HSPG2-213ENST00000498495 PLXNA2O75051 1894 aa12.91□□□□□ -0.34
HSPG2-213ENST00000498495 A0A1B0GTQ1 180 aa12.9□□□□□ -0.34
HSPG2-213ENST00000498495 TRAFD1O14545 582 aaPredicted RBP12.9□□□□□ -0.34
HSPG2-213ENST00000498495 FPGTO14772 594 aa12.9□□□□□ -0.34
HSPG2-213ENST00000498495 GIPC1O14908 333 aa12.9□□□□□ -0.34
HSPG2-213ENST00000498495 SPINT1O43278 529 aa12.9□□□□□ -0.34
HSPG2-213ENST00000498495 KRT10P13645 584 aa12.9□□□□□ -0.34
HSPG2-213ENST00000498495 CES1P23141 567 aa12.9□□□□□ -0.34
HSPG2-213ENST00000498495 CDKN2BP42772 138 aa12.9□□□□□ -0.34
HSPG2-213ENST00000498495 ARRB1P49407 418 aaPredicted RBP12.9□□□□□ -0.34
HSPG2-213ENST00000498495 DYNLT1P63172 113 aa12.9□□□□□ -0.34
HSPG2-213ENST00000498495 AP1B1Q10567 949 aa12.9□□□□□ -0.34
HSPG2-213ENST00000498495 PDK1Q15118 436 aa12.9□□□□□ -0.34
HSPG2-213ENST00000498495 LLGL1Q15334 1064 aa12.9□□□□□ -0.34
HSPG2-213ENST00000498495 KAZNQ674X7 775 aa12.9□□□□□ -0.34
HSPG2-213ENST00000498495 SPOCD1Q6ZMY3 1216 aa12.9□□□□□ -0.34
HSPG2-213ENST00000498495 DBX2Q6ZNG2 339 aa12.9□□□□□ -0.34
HSPG2-213ENST00000498495 Q6ZSR6 202 aa12.9□□□□□ -0.34
HSPG2-213ENST00000498495 PIP4P1Q86T03 277 aa12.9□□□□□ -0.34
HSPG2-213ENST00000498495 ZSWIM9Q86XI8 627 aa12.9□□□□□ -0.34
HSPG2-213ENST00000498495 CCDC50Q8IVM0 306 aa12.9□□□□□ -0.34
HSPG2-213ENST00000498495 NAXDQ8IW45 347 aa12.9□□□□□ -0.34
HSPG2-213ENST00000498495 KATNAL2Q8IYT4 538 aa12.9□□□□□ -0.34
HSPG2-213ENST00000498495 OXR1Q8N573 874 aa12.9□□□□□ -0.34
HSPG2-213ENST00000498495 RHBDD1Q8TEB9 315 aa12.9□□□□□ -0.34
HSPG2-213ENST00000498495 MAML1Q92585 1016 aa12.9□□□□□ -0.34
HSPG2-213ENST00000498495 FATE1Q969F0 183 aa12.9□□□□□ -0.34
HSPG2-213ENST00000498495 ECHDC3Q96DC8 303 aa12.9□□□□□ -0.34
HSPG2-213ENST00000498495 BMFQ96LC9 184 aa12.9□□□□□ -0.34
HSPG2-213ENST00000498495 NSMCE3Q96MG7 304 aa12.9□□□□□ -0.34
HSPG2-213ENST00000498495 SEMA3CQ99985 751 aa12.9□□□□□ -0.34
HSPG2-213ENST00000498495 C1QTNF7Q9BXJ2 289 aa12.9□□□□□ -0.34
HSPG2-213ENST00000498495 POLR1EQ9GZS1 481 aaKnown RBP12.9□□□□□ -0.34
HSPG2-213ENST00000498495 AMACRQ9UHK6 382 aa12.9□□□□□ -0.34
HSPG2-213ENST00000498495 ATP8A1Q9Y2Q0 1164 aa12.9□□□□□ -0.34
HSPG2-213ENST00000498495 MED19A0JLT2 244 aaPredicted RBP12.89□□□□□ -0.35
HSPG2-213ENST00000498495 A6NNZ2 444 aa12.89□□□□□ -0.35
HSPG2-213ENST00000498495 PPP1R12AO14974 1030 aaPredicted RBP12.89□□□□□ -0.35
HSPG2-213ENST00000498495 RAD51BO15315 384 aa12.89□□□□□ -0.35
HSPG2-213ENST00000498495 FLRT2O43155 660 aa12.89□□□□□ -0.35
HSPG2-213ENST00000498495 LZTS3O60299 673 aaPredicted RBP12.89□□□□□ -0.35
HSPG2-213ENST00000498495 CST8O60676 142 aa12.89□□□□□ -0.35
HSPG2-213ENST00000498495 SOCS5O75159 536 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms