RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 FPGTO14772 594 aa18.57■□□□□ 0.56
HOXD11-202ENST00000498438 MAFKO60675 156 aa18.57■□□□□ 0.56
HOXD11-202ENST00000498438 MMP20O60882 483 aa18.57■□□□□ 0.56
HOXD11-202ENST00000498438 SERPINA4P29622 427 aa18.57■□□□□ 0.56
HOXD11-202ENST00000498438 MAN1A1P33908 653 aa18.57■□□□□ 0.56
HOXD11-202ENST00000498438 RENBPP51606 427 aa18.57■□□□□ 0.56
HOXD11-202ENST00000498438 SUOXP51687 545 aa18.57■□□□□ 0.56
HOXD11-202ENST00000498438 ELP6Q0PNE2 266 aa18.57■□□□□ 0.56
HOXD11-202ENST00000498438 ZNF235Q14590 738 aa18.57■□□□□ 0.56
HOXD11-202ENST00000498438 UGP2Q16851 508 aa18.57■□□□□ 0.56
HOXD11-202ENST00000498438 BRAT1Q6PJG6 821 aa18.57■□□□□ 0.56
HOXD11-202ENST00000498438 ZSWIM9Q86XI8 627 aa18.57■□□□□ 0.56
HOXD11-202ENST00000498438 EID2Q8N6I1 236 aa18.57■□□□□ 0.56
HOXD11-202ENST00000498438 DENND6BQ8NEG7 585 aa18.57■□□□□ 0.56
HOXD11-202ENST00000498438 SLC35G2Q8TBE7 412 aa18.57■□□□□ 0.56
HOXD11-202ENST00000498438 PSKH2Q96QS6 385 aa18.57■□□□□ 0.56
HOXD11-202ENST00000498438 PCDH12Q9NPG4 1184 aa18.57■□□□□ 0.56
HOXD11-202ENST00000498438 PTPRBP23467 1997 aa18.57■□□□□ 0.56
HOXD11-202ENST00000498438 USP24Q9UPU5 2620 aa18.56■□□□□ 0.56
HOXD11-202ENST00000498438 MFSD11O43934 449 aa18.56■□□□□ 0.56
HOXD11-202ENST00000498438 TM7SF2O76062 418 aa18.56■□□□□ 0.56
HOXD11-202ENST00000498438 DKK1O94907 266 aa18.56■□□□□ 0.56
HOXD11-202ENST00000498438 PEX11BO96011 259 aa18.56■□□□□ 0.56
HOXD11-202ENST00000498438 RABIFP47224 123 aa18.56■□□□□ 0.56
HOXD11-202ENST00000498438 SCNN1BP51168 640 aa18.56■□□□□ 0.56
HOXD11-202ENST00000498438 NSUN2Q08J23 767 aaKnown RBP eCLIP18.56■□□□□ 0.56
HOXD11-202ENST00000498438 MESDQ14696 234 aa18.56■□□□□ 0.56
HOXD11-202ENST00000498438 TMEM52BQ4KMG9 183 aa18.56■□□□□ 0.56
HOXD11-202ENST00000498438 KDM7AQ6ZMT4 941 aa18.56■□□□□ 0.56
HOXD11-202ENST00000498438 KCTD6Q8NC69 237 aa18.56■□□□□ 0.56
HOXD11-202ENST00000498438 CNDP2Q96KP4 475 aaKnown RBP18.56■□□□□ 0.56
HOXD11-202ENST00000498438 ZNF670Q9BS34 389 aa18.56■□□□□ 0.56
HOXD11-202ENST00000498438 CAAP1Q9H8G2 361 aa18.56■□□□□ 0.56
HOXD11-202ENST00000498438 CACNA1BQ00975 2339 aa18.55■□□□□ 0.56
HOXD11-202ENST00000498438 TTC24A2A3L6 582 aaPredicted RBP18.55■□□□□ 0.56
HOXD11-202ENST00000498438 C1QTNF9BB2RNN3 333 aa18.55■□□□□ 0.56
HOXD11-202ENST00000498438 LDOC1O95751 146 aaPredicted RBP18.55■□□□□ 0.56
HOXD11-202ENST00000498438 PRKCGP05129 697 aa18.55■□□□□ 0.56
HOXD11-202ENST00000498438 KRT7P08729 469 aa18.55■□□□□ 0.56
HOXD11-202ENST00000498438 C1QTNF9P0C862 333 aa18.55■□□□□ 0.56
HOXD11-202ENST00000498438 IGFALSP35858 605 aa18.55■□□□□ 0.56
HOXD11-202ENST00000498438 MMP12P39900 470 aa18.55■□□□□ 0.56
HOXD11-202ENST00000498438 AP1S1P61966 158 aa18.55■□□□□ 0.56
HOXD11-202ENST00000498438 BCL2L1Q07817 233 aa18.55■□□□□ 0.56
HOXD11-202ENST00000498438 PDK2Q15119 407 aa18.55■□□□□ 0.56
HOXD11-202ENST00000498438 CCDC157Q569K6 752 aa18.55■□□□□ 0.56
HOXD11-202ENST00000498438 ANKRD20A8PQ5CZ79 823 aa18.55■□□□□ 0.56
HOXD11-202ENST00000498438 NCBP2-AS2Q69YL0 99 aa18.55■□□□□ 0.56
HOXD11-202ENST00000498438 ERAP2Q6P179 960 aa18.55■□□□□ 0.56
HOXD11-202ENST00000498438 UNQ6494/PRO21346Q6UXR6 183 aa18.55■□□□□ 0.56
HOXD11-202ENST00000498438 DCP2Q8IU60 420 aaKnown RBP18.55■□□□□ 0.56
HOXD11-202ENST00000498438 TC2NQ8N9U0 490 aa18.55■□□□□ 0.56
HOXD11-202ENST00000498438 PCDH19Q8TAB3 1148 aa18.55■□□□□ 0.56
HOXD11-202ENST00000498438 GATA6Q92908 595 aa18.55■□□□□ 0.56
HOXD11-202ENST00000498438 CENPTQ96BT3 561 aa18.55■□□□□ 0.56
HOXD11-202ENST00000498438 NSMCE3Q96MG7 304 aa18.55■□□□□ 0.56
HOXD11-202ENST00000498438 TMEM121BQ9BXQ6 578 aaPredicted RBP18.55■□□□□ 0.56
HOXD11-202ENST00000498438 ATP8A1Q9Y2Q0 1164 aa18.55■□□□□ 0.56
HOXD11-202ENST00000498438 COQ6Q9Y2Z9 468 aa18.55■□□□□ 0.56
HOXD11-202ENST00000498438 MSRB2Q9Y3D2 182 aa18.55■□□□□ 0.56
HOXD11-202ENST00000498438 SPTY2D1-AS1A0A0U1RR47 76 aa18.54■□□□□ 0.56
HOXD11-202ENST00000498438 TRAFD1O14545 582 aaPredicted RBP18.54■□□□□ 0.56
HOXD11-202ENST00000498438 ENC1O14682 589 aa18.54■□□□□ 0.56
HOXD11-202ENST00000498438 RIOK3O14730 519 aaKnown RBP18.54■□□□□ 0.56
HOXD11-202ENST00000498438 C6P13671 934 aa18.54■□□□□ 0.56
HOXD11-202ENST00000498438 HSPA9P38646 679 aaKnown RBP18.54■□□□□ 0.56
HOXD11-202ENST00000498438 SEMG2Q02383 582 aa18.54■□□□□ 0.56
HOXD11-202ENST00000498438 DNAJC3Q13217 504 aa18.54■□□□□ 0.56
HOXD11-202ENST00000498438 PDE1CQ14123 709 aaPredicted RBP18.54■□□□□ 0.56
HOXD11-202ENST00000498438 FZD2Q14332 565 aa18.54■□□□□ 0.56
HOXD11-202ENST00000498438 ZNF542PQ5EBM4 170 aa18.54■□□□□ 0.56
HOXD11-202ENST00000498438 TPRG1LQ5T0D9 272 aa18.54■□□□□ 0.56
HOXD11-202ENST00000498438 RHOT2Q8IXI1 618 aa18.54■□□□□ 0.56
HOXD11-202ENST00000498438 PGBD5Q8N414 524 aa18.54■□□□□ 0.56
HOXD11-202ENST00000498438 PAF1Q8N7H5 531 aa18.54■□□□□ 0.56
HOXD11-202ENST00000498438 TP53I13Q8NBR0 393 aaPredicted RBP18.54■□□□□ 0.56
HOXD11-202ENST00000498438 NSMCE1Q8WV22 266 aa18.54■□□□□ 0.56
HOXD11-202ENST00000498438 RFFLQ8WZ73 363 aa18.54■□□□□ 0.56
HOXD11-202ENST00000498438 ECHDC3Q96DC8 303 aa18.54■□□□□ 0.56
HOXD11-202ENST00000498438 IFT43Q96FT9 208 aa18.54■□□□□ 0.56
HOXD11-202ENST00000498438 C1QTNF7Q9BXJ2 289 aa18.54■□□□□ 0.56
HOXD11-202ENST00000498438 UCKL1Q9NWZ5 548 aa18.54■□□□□ 0.56
HOXD11-202ENST00000498438 DNAJC28Q9NX36 388 aa18.54■□□□□ 0.56
HOXD11-202ENST00000498438 PLXNB3Q9ULL4 1909 aa18.53■□□□□ 0.56
HOXD11-202ENST00000498438 GOLGA4Q13439 2230 aaKnown RBP18.53■□□□□ 0.56
HOXD11-202ENST00000498438 FAM221BA6H8Z2 402 aa18.53■□□□□ 0.56
HOXD11-202ENST00000498438 PIAS2O75928 621 aa18.53■□□□□ 0.56
HOXD11-202ENST00000498438 MTA2O94776 668 aa18.53■□□□□ 0.56
HOXD11-202ENST00000498438 CR2P20023 1033 aa18.53■□□□□ 0.56
HOXD11-202ENST00000498438 DGKAP23743 735 aa18.53■□□□□ 0.56
HOXD11-202ENST00000498438 MMP13P45452 471 aa18.53■□□□□ 0.56
HOXD11-202ENST00000498438 PFN3P60673 137 aa18.53■□□□□ 0.56
HOXD11-202ENST00000498438 PAFAH1B3Q15102 231 aaKnown RBP18.53■□□□□ 0.56
HOXD11-202ENST00000498438 IRF4Q15306 451 aa18.53■□□□□ 0.56
HOXD11-202ENST00000498438 ZFYVE27Q5T4F4 411 aa18.53■□□□□ 0.56
HOXD11-202ENST00000498438 PARGQ86W56 976 aa18.53■□□□□ 0.56
HOXD11-202ENST00000498438 LRRC49Q8IUZ0 686 aa18.53■□□□□ 0.56
HOXD11-202ENST00000498438 MAP7D3Q8IWC1 876 aa18.53■□□□□ 0.56
HOXD11-202ENST00000498438 BBS5Q8N3I7 341 aa18.53■□□□□ 0.56
HOXD11-202ENST00000498438 SLC25A45Q8N413 288 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms