RNA–Protein interactions for RNA: ENST00000497957.1

PTK7-220, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 3

Gene PTK7, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-220ENST00000497957 NDC80O14777 642 aa16.09■□□□□ 0.17
PTK7-220ENST00000497957 AURKAO14965 403 aa16.09■□□□□ 0.17
PTK7-220ENST00000497957 EIF3HO15372 352 aaKnown RBP eCLIP16.09■□□□□ 0.17
PTK7-220ENST00000497957 TIMM44O43615 452 aa16.09■□□□□ 0.17
PTK7-220ENST00000497957 PGLSO95336 258 aa16.09■□□□□ 0.17
PTK7-220ENST00000497957 NDST3O95803 873 aa16.09■□□□□ 0.17
PTK7-220ENST00000497957 UGT2B4P06133 528 aa16.09■□□□□ 0.17
PTK7-220ENST00000497957 ALPIP09923 528 aa16.09■□□□□ 0.17
PTK7-220ENST00000497957 GOLGA6DP0CG33 693 aa16.09■□□□□ 0.17
PTK7-220ENST00000497957 NMBRP28336 390 aa16.09■□□□□ 0.17
PTK7-220ENST00000497957 VASPP50552 380 aaPredicted RBP16.09■□□□□ 0.17
PTK7-220ENST00000497957 ST8SIA6P61647 398 aa16.09■□□□□ 0.17
PTK7-220ENST00000497957 BCL2L1Q07817 233 aa16.09■□□□□ 0.17
PTK7-220ENST00000497957 CDH17Q12864 832 aa16.09■□□□□ 0.17
PTK7-220ENST00000497957 CBLBQ13191 982 aa16.09■□□□□ 0.17
PTK7-220ENST00000497957 SEPT6Q14141 434 aa16.09■□□□□ 0.17
PTK7-220ENST00000497957 CASP8Q14790 479 aa16.09■□□□□ 0.17
PTK7-220ENST00000497957 SLC14A2Q15849 920 aa16.09■□□□□ 0.17
PTK7-220ENST00000497957 HNRNPA1L2Q32P51 320 aaKnown RBP16.09■□□□□ 0.17
PTK7-220ENST00000497957 C2orf27AQ580R0 203 aa16.09■□□□□ 0.17
PTK7-220ENST00000497957 DNAJC21Q5F1R6 531 aaKnown RBP16.09■□□□□ 0.17
PTK7-220ENST00000497957 ARSIQ5FYB1 569 aa16.09■□□□□ 0.17
PTK7-220ENST00000497957 PKN3Q6P5Z2 889 aa16.09■□□□□ 0.17
PTK7-220ENST00000497957 SERPINA13PQ6UXR4 307 aa16.09■□□□□ 0.17
PTK7-220ENST00000497957 PIH1D2Q8WWB5 315 aa16.09■□□□□ 0.17
PTK7-220ENST00000497957 STAMBPL1Q96FJ0 436 aa16.09■□□□□ 0.17
PTK7-220ENST00000497957 FAM129BQ96TA1 746 aa16.09■□□□□ 0.17
PTK7-220ENST00000497957 EBNA1BP2Q99848 306 aaKnown RBP16.09■□□□□ 0.17
PTK7-220ENST00000497957 C8orf33Q9H7E9 229 aaPredicted RBP16.09■□□□□ 0.17
PTK7-220ENST00000497957 GOLGA6AQ9NYA3 693 aa16.09■□□□□ 0.17
PTK7-220ENST00000497957 IL1RAPL1Q9NZN1 696 aa16.09■□□□□ 0.17
PTK7-220ENST00000497957 SLC2A6Q9UGQ3 507 aa16.09■□□□□ 0.17
PTK7-220ENST00000497957 NDRG2Q9UN36 371 aaKnown RBP16.09■□□□□ 0.17
PTK7-220ENST00000497957 DUSP12Q9UNI6 340 aa16.09■□□□□ 0.17
PTK7-220ENST00000497957 PLA2G4CQ9UP65 541 aa16.09■□□□□ 0.17
PTK7-220ENST00000497957 FAM50BQ9Y247 325 aa16.09■□□□□ 0.17
PTK7-220ENST00000497957 PCDHB9Q9Y5E1 797 aa16.09■□□□□ 0.17
PTK7-220ENST00000497957 ATG2BQ96BY7 2078 aa16.08■□□□□ 0.16
PTK7-220ENST00000497957 SDR42E2A6NKP2 422 aa16.08■□□□□ 0.16
PTK7-220ENST00000497957 CCL22O00626 93 aa16.08■□□□□ 0.16
PTK7-220ENST00000497957 HTRA2O43464 458 aaPredicted RBP16.08■□□□□ 0.16
PTK7-220ENST00000497957 LEFTY1O75610 366 aa16.08■□□□□ 0.16
PTK7-220ENST00000497957 POP4O95707 220 aaKnown RBP16.08■□□□□ 0.16
PTK7-220ENST00000497957 TTC4O95801 387 aa16.08■□□□□ 0.16
PTK7-220ENST00000497957 CPP00450 1065 aa16.08■□□□□ 0.16
PTK7-220ENST00000497957 HNRNPLP14866 589 aaKnown RBP eCLIP16.08■□□□□ 0.16
PTK7-220ENST00000497957 COL9A1P20849 921 aa16.08■□□□□ 0.16
PTK7-220ENST00000497957 TNFRSF4P43489 277 aa16.08■□□□□ 0.16
PTK7-220ENST00000497957 SARNPP82979 210 aaKnown RBP16.08■□□□□ 0.16
PTK7-220ENST00000497957 SLC29A2Q14542 456 aa16.08■□□□□ 0.16
PTK7-220ENST00000497957 SLMAPQ14BN4 828 aa16.08■□□□□ 0.16
PTK7-220ENST00000497957 CASC4Q6P4E1 433 aa16.08■□□□□ 0.16
PTK7-220ENST00000497957 TRMT10BQ6PF06 316 aaKnown RBP16.08■□□□□ 0.16
PTK7-220ENST00000497957 UNC5AQ6ZN44 842 aa16.08■□□□□ 0.16
PTK7-220ENST00000497957 LINC00523Q86TU6 105 aa16.08■□□□□ 0.16
PTK7-220ENST00000497957 METTL3Q86U44 580 aaKnown RBP16.08■□□□□ 0.16
PTK7-220ENST00000497957 RELL1Q8IUW5 271 aa16.08■□□□□ 0.16
PTK7-220ENST00000497957 ZNF513Q8N8E2 541 aaPredicted RBP16.08■□□□□ 0.16
PTK7-220ENST00000497957 PYROXD1Q8WU10 500 aa16.08■□□□□ 0.16
PTK7-220ENST00000497957 ARRDC3Q96B67 414 aa16.08■□□□□ 0.16
PTK7-220ENST00000497957 KLHL32Q96NJ5 620 aa16.08■□□□□ 0.16
PTK7-220ENST00000497957 NECAB3Q96P71 396 aaPredicted RBP16.08■□□□□ 0.16
PTK7-220ENST00000497957 HEPHQ9BQS7 1158 aa16.08■□□□□ 0.16
PTK7-220ENST00000497957 ARNT2Q9HBZ2 717 aa16.08■□□□□ 0.16
PTK7-220ENST00000497957 PRSS16Q9NQE7 514 aa16.08■□□□□ 0.16
PTK7-220ENST00000497957 CHRAC1Q9NRG0 131 aa16.08■□□□□ 0.16
PTK7-220ENST00000497957 SLC17A6Q9P2U8 582 aa16.08■□□□□ 0.16
PTK7-220ENST00000497957 MTF2Q9Y483 593 aaPredicted RBP16.08■□□□□ 0.16
PTK7-220ENST00000497957 EDDM13A0A1B0GTR0 161 aa16.07■□□□□ 0.16
PTK7-220ENST00000497957 KRBA1A5PL33 1030 aa16.07■□□□□ 0.16
PTK7-220ENST00000497957 A8MX80 341 aa16.07■□□□□ 0.16
PTK7-220ENST00000497957 ADAM23O75077 832 aa16.07■□□□□ 0.16
PTK7-220ENST00000497957 KLF8O95600 359 aaPredicted RBP16.07■□□□□ 0.16
PTK7-220ENST00000497957 EPHX1P07099 455 aa16.07■□□□□ 0.16
PTK7-220ENST00000497957 CES1P23141 567 aa16.07■□□□□ 0.16
PTK7-220ENST00000497957 NNMTP40261 264 aa16.07■□□□□ 0.16
PTK7-220ENST00000497957 ABL2P42684 1182 aa16.07■□□□□ 0.16
PTK7-220ENST00000497957 NPY2RP49146 381 aa16.07■□□□□ 0.16
PTK7-220ENST00000497957 MLF2Q15773 248 aaPredicted RBP16.07■□□□□ 0.16
PTK7-220ENST00000497957 ARMC12Q5T9G4 340 aa16.07■□□□□ 0.16
PTK7-220ENST00000497957 KIAA1211LQ6NV74 962 aa16.07■□□□□ 0.16
PTK7-220ENST00000497957 GDPD4Q6W3E5 623 aa16.07■□□□□ 0.16
PTK7-220ENST00000497957 CACUL1Q86Y37 369 aa16.07■□□□□ 0.16
PTK7-220ENST00000497957 MDGA1Q8NFP4 955 aa16.07■□□□□ 0.16
PTK7-220ENST00000497957 BLOC1S5Q8TDH9 187 aa16.07■□□□□ 0.16
PTK7-220ENST00000497957 UCMAQ8WVF2 138 aa16.07■□□□□ 0.16
PTK7-220ENST00000497957 FAM3CQ92520 227 aa16.07■□□□□ 0.16
PTK7-220ENST00000497957 RMDN1Q96DB5 314 aa16.07■□□□□ 0.16
PTK7-220ENST00000497957 MFSD3Q96ES6 412 aa16.07■□□□□ 0.16
PTK7-220ENST00000497957 ZIM3Q96PE6 472 aa16.07■□□□□ 0.16
PTK7-220ENST00000497957 PPP1R2P1Q96PQ5 205 aa16.07■□□□□ 0.16
PTK7-220ENST00000497957 FRMD8Q9BZ67 464 aaPredicted RBP16.07■□□□□ 0.16
PTK7-220ENST00000497957 SLC6A17Q9H1V8 727 aa16.07■□□□□ 0.16
PTK7-220ENST00000497957 PABPC3Q9H361 631 aaKnown RBP16.07■□□□□ 0.16
PTK7-220ENST00000497957 SUV39H2Q9H5I1 410 aa16.07■□□□□ 0.16
PTK7-220ENST00000497957 ATP13A3Q9H7F0 1226 aa16.07■□□□□ 0.16
PTK7-220ENST00000497957 VPS37BQ9H9H4 285 aa16.07■□□□□ 0.16
PTK7-220ENST00000497957 SMYD2Q9NRG4 433 aa16.07■□□□□ 0.16
PTK7-220ENST00000497957 BFARQ9NZS9 450 aa16.07■□□□□ 0.16
PTK7-220ENST00000497957 ZC3H7BQ9UGR2 993 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms