RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 ZNF324BQ6AW86 544 aaPredicted RBP3.42□□□□□ -1.86
PSPC1-205ENST00000497722 TMEM71Q6P5X7 295 aa3.42□□□□□ -1.86
PSPC1-205ENST00000497722 PDXDC1Q6P996 788 aa3.42□□□□□ -1.86
PSPC1-205ENST00000497722 FAM83HQ6ZRV2 1179 aaPredicted RBP3.42□□□□□ -1.86
PSPC1-205ENST00000497722 TRILQ7L0X0 811 aa3.42□□□□□ -1.86
PSPC1-205ENST00000497722 RSRC2Q7L4I2 434 aaKnown RBP3.42□□□□□ -1.86
PSPC1-205ENST00000497722 R3HCC1LQ7Z5L2 792 aaKnown RBP3.42□□□□□ -1.86
PSPC1-205ENST00000497722 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.42□□□□□ -1.86
PSPC1-205ENST00000497722 SPATA2LQ8IUW3 424 aaPredicted RBP3.42□□□□□ -1.86
PSPC1-205ENST00000497722 FBXL14Q8N1E6 418 aa3.42□□□□□ -1.86
PSPC1-205ENST00000497722 ZCCHC9Q8N567 271 aaKnown RBP3.42□□□□□ -1.86
PSPC1-205ENST00000497722 TSPYL6Q8N831 410 aa3.42□□□□□ -1.86
PSPC1-205ENST00000497722 ZBTB8BQ8NAP8 495 aaPredicted RBP3.42□□□□□ -1.86
PSPC1-205ENST00000497722 NFKBIDQ8NI38 313 aa3.42□□□□□ -1.86
PSPC1-205ENST00000497722 MPP4Q96JB8 637 aa3.42□□□□□ -1.86
PSPC1-205ENST00000497722 APOLD1Q96LR9 279 aa3.42□□□□□ -1.86
PSPC1-205ENST00000497722 ZNF570Q96NI8 536 aa3.42□□□□□ -1.86
PSPC1-205ENST00000497722 NTPCRQ9BSD7 190 aaKnown RBP3.42□□□□□ -1.86
PSPC1-205ENST00000497722 HEMGNQ9BXL5 484 aa3.42□□□□□ -1.86
PSPC1-205ENST00000497722 NPFFR1Q9GZQ6 430 aa3.42□□□□□ -1.86
PSPC1-205ENST00000497722 BPIFA1Q9NP55 256 aa3.42□□□□□ -1.86
PSPC1-205ENST00000497722 CD93Q9NPY3 652 aa3.42□□□□□ -1.86
PSPC1-205ENST00000497722 GJD2Q9UKL4 321 aa3.42□□□□□ -1.86
PSPC1-205ENST00000497722 CARD8Q9Y2G2 431 aa3.42□□□□□ -1.86
PSPC1-205ENST00000497722 A0A1B0GVC2 190 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 J3KRW8 73 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 SNAP23O00161 211 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 CHL1O00533 1208 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 BCAT2O15382 392 aaPredicted RBP3.41□□□□□ -1.86
PSPC1-205ENST00000497722 CLDN7O95471 211 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 LCATP04180 440 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 HSPA1AP0DMV8 641 aaKnown RBP3.41□□□□□ -1.86
PSPC1-205ENST00000497722 HSPA1BP0DMV9 641 aaKnown RBP3.41□□□□□ -1.86
PSPC1-205ENST00000497722 CD53P19397 219 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 ABCD1P33897 745 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 DDIT3P35638 169 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 RFX5P48382 616 aaPredicted RBP3.41□□□□□ -1.86
PSPC1-205ENST00000497722 GNAQP50148 359 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 EIF3BP55884 814 aaKnown RBP3.41□□□□□ -1.86
PSPC1-205ENST00000497722 ZP1P60852 638 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 ROR2Q01974 943 aaKnown RBP3.41□□□□□ -1.86
PSPC1-205ENST00000497722 CYP4A11Q02928 519 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 EGR4Q05215 589 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 DDX10Q13206 875 aaKnown RBP3.41□□□□□ -1.86
PSPC1-205ENST00000497722 PLEKHO1Q53GL0 409 aaPredicted RBP3.41□□□□□ -1.86
PSPC1-205ENST00000497722 PRAMEF19Q5SWL8 479 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 TBC1D9BQ66K14 1250 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 TYW3Q6IPR3 259 aaKnown RBP3.41□□□□□ -1.86
PSPC1-205ENST00000497722 TRIM74Q86UV6 250 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 TRIM73Q86UV7 250 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 TDRPQ86YL5 185 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 DENND6AQ8IWF6 608 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 MB21D2Q8IYB1 491 aaPredicted RBP3.41□□□□□ -1.86
PSPC1-205ENST00000497722 CNTROBQ8N137 903 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 PLD5Q8N7P1 536 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 PRR26Q8N8Z3 221 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 KDM1BQ8NB78 822 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 PCYOX1LQ8NBM8 494 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 ENGASEQ8NFI3 743 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 GJC3Q8NFK1 279 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 OR4N2Q8NGD1 307 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 OR14A16Q8NHC5 309 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 NEUROG1Q92886 237 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 PHF21BQ96EK2 531 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 CLSTN3Q9BQT9 956 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 H2AFJQ9BTM1 129 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 KLHL31Q9H511 634 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 PLAC1Q9HBJ0 212 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 KRT84Q9NSB2 600 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 C20orf141Q9NUB4 165 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 TAS2R10Q9NYW0 307 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 PLK2Q9NYY3 685 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 SARDHQ9UL12 918 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 MYO6Q9UM54 1294 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 TMEM98Q9Y2Y6 226 aa3.41□□□□□ -1.86
PSPC1-205ENST00000497722 BECN2A8MW95 431 aa3.4□□□□□ -1.87
PSPC1-205ENST00000497722 RGS11O94810 467 aa3.4□□□□□ -1.87
PSPC1-205ENST00000497722 PRSS2P07478 247 aa3.4□□□□□ -1.87
PSPC1-205ENST00000497722 NAGAP17050 411 aa3.4□□□□□ -1.87
PSPC1-205ENST00000497722 MYF6P23409 242 aa3.4□□□□□ -1.87
PSPC1-205ENST00000497722 HOXD3P31249 432 aaPredicted RBP3.4□□□□□ -1.87
PSPC1-205ENST00000497722 RPL3P39023 403 aaKnown RBP3.4□□□□□ -1.87
PSPC1-205ENST00000497722 MLH1P40692 756 aa3.4□□□□□ -1.87
PSPC1-205ENST00000497722 NR1H2P55055 460 aa3.4□□□□□ -1.87
PSPC1-205ENST00000497722 SELENOVP59797 346 aa3.4□□□□□ -1.87
PSPC1-205ENST00000497722 SLC18A2Q05940 514 aa3.4□□□□□ -1.87
PSPC1-205ENST00000497722 DSC1Q08554 894 aa3.4□□□□□ -1.87
PSPC1-205ENST00000497722 TRAF1Q13077 416 aa3.4□□□□□ -1.87
PSPC1-205ENST00000497722 NEDD9Q14511 834 aa3.4□□□□□ -1.87
PSPC1-205ENST00000497722 LPIN1Q14693 890 aa3.4□□□□□ -1.87
PSPC1-205ENST00000497722 ASIC2Q16515 512 aa3.4□□□□□ -1.87
PSPC1-205ENST00000497722 GSTA3Q16772 222 aa3.4□□□□□ -1.87
PSPC1-205ENST00000497722 SLC9B1Q4ZJI4 515 aa3.4□□□□□ -1.87
PSPC1-205ENST00000497722 C17orf99Q6UX52 265 aa3.4□□□□□ -1.87
PSPC1-205ENST00000497722 ZNF367Q7RTV3 350 aa3.4□□□□□ -1.87
PSPC1-205ENST00000497722 SLC46A3Q7Z3Q1 461 aa3.4□□□□□ -1.87
PSPC1-205ENST00000497722 PATL1Q86TB9 770 aaKnown RBP3.4□□□□□ -1.87
PSPC1-205ENST00000497722 FJX1Q86VR8 437 aa3.4□□□□□ -1.87
PSPC1-205ENST00000497722 CCDC105Q8IYK2 499 aa3.4□□□□□ -1.87
PSPC1-205ENST00000497722 PARP16Q8N5Y8 322 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms