RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 GAGE12JA6NER3 117 aa4.21□□□□□ -1.74
SMC4-225ENST00000497203 LIPT2A6NK58 231 aa4.21□□□□□ -1.74
SMC4-225ENST00000497203 MYO1GB0I1T2 1018 aa4.21□□□□□ -1.74
SMC4-225ENST00000497203 PTGES3LE9PB15 166 aa4.21□□□□□ -1.74
SMC4-225ENST00000497203 TLX3O43711 291 aaPredicted RBP4.21□□□□□ -1.74
SMC4-225ENST00000497203 SLC25A17O43808 307 aa4.21□□□□□ -1.74
SMC4-225ENST00000497203 PAGE4O60829 102 aa4.21□□□□□ -1.74
SMC4-225ENST00000497203 MLYCDO95822 493 aa4.21□□□□□ -1.74
SMC4-225ENST00000497203 IGKV2-30P06310 120 aa4.21□□□□□ -1.74
SMC4-225ENST00000497203 ENO3P13929 434 aaPredicted RBP4.21□□□□□ -1.74
SMC4-225ENST00000497203 CDAP32320 146 aa4.21□□□□□ -1.74
SMC4-225ENST00000497203 HOXD13P35453 343 aa4.21□□□□□ -1.74
SMC4-225ENST00000497203 GAD2Q05329 585 aa4.21□□□□□ -1.74
SMC4-225ENST00000497203 SRSF1Q07955 248 aaKnown RBP eCLIP4.21□□□□□ -1.74
SMC4-225ENST00000497203 CSTF3Q12996 717 aaKnown RBP4.21□□□□□ -1.74
SMC4-225ENST00000497203 MTX1Q13505 466 aa4.21□□□□□ -1.74
SMC4-225ENST00000497203 WTAPQ15007 396 aa4.21□□□□□ -1.74
SMC4-225ENST00000497203 PLEKHO1Q53GL0 409 aaPredicted RBP4.21□□□□□ -1.74
SMC4-225ENST00000497203 RILPL1Q5EBL4 403 aa4.21□□□□□ -1.74
SMC4-225ENST00000497203 CYP20A1Q6UW02 462 aa4.21□□□□□ -1.74
SMC4-225ENST00000497203 BHLHA9Q7RTU4 235 aa4.21□□□□□ -1.74
SMC4-225ENST00000497203 CADM3Q8N126 398 aa4.21□□□□□ -1.74
SMC4-225ENST00000497203 TTC39CQ8N584 583 aa4.21□□□□□ -1.74
SMC4-225ENST00000497203 Q8N9P0 234 aaPredicted RBP4.21□□□□□ -1.74
SMC4-225ENST00000497203 TMEM116Q8NCL8 245 aa4.21□□□□□ -1.74
SMC4-225ENST00000497203 ZNF548Q8NEK5 533 aaPredicted RBP4.21□□□□□ -1.74
SMC4-225ENST00000497203 MCPH1Q8NEM0 835 aa4.21□□□□□ -1.74
SMC4-225ENST00000497203 BICD2Q8TD16 824 aa4.21□□□□□ -1.74
SMC4-225ENST00000497203 EME1Q96AY2 570 aa4.21□□□□□ -1.74
SMC4-225ENST00000497203 HMCESQ96FZ2 354 aa4.21□□□□□ -1.74
SMC4-225ENST00000497203 ZC3HAV1LQ96H79 300 aaKnown RBP4.21□□□□□ -1.74
SMC4-225ENST00000497203 ZFYVE19Q96K21 471 aa4.21□□□□□ -1.74
SMC4-225ENST00000497203 SIN3AQ96ST3 1273 aa4.21□□□□□ -1.74
SMC4-225ENST00000497203 B3GNT4Q9C0J1 378 aa4.21□□□□□ -1.74
SMC4-225ENST00000497203 SH2D4AQ9H788 454 aa4.21□□□□□ -1.74
SMC4-225ENST00000497203 KAT14Q9H8E8 782 aa4.21□□□□□ -1.74
SMC4-225ENST00000497203 FBRSL1Q9HCM7 1045 aaKnown RBP4.21□□□□□ -1.74
SMC4-225ENST00000497203 DLGAP2Q9P1A6 1054 aa4.21□□□□□ -1.74
SMC4-225ENST00000497203 PLEKHB1Q9UF11 243 aaPredicted RBP4.21□□□□□ -1.74
SMC4-225ENST00000497203 TBC1D29Q9UFV1 150 aa4.21□□□□□ -1.74
SMC4-225ENST00000497203 INTS6Q9UL03 887 aaKnown RBP4.21□□□□□ -1.74
SMC4-225ENST00000497203 CORO1CQ9ULV4 474 aaPredicted RBP4.21□□□□□ -1.74
SMC4-225ENST00000497203 TTLL3Q9Y4R7 772 aa4.21□□□□□ -1.74
SMC4-225ENST00000497203 CAPN7Q9Y6W3 813 aa4.21□□□□□ -1.74
SMC4-225ENST00000497203 RSF1Q96T23 1441 aaPredicted RBP4.21□□□□□ -1.74
SMC4-225ENST00000497203 TTBK1Q5TCY1 1321 aaPredicted RBP4.21□□□□□ -1.74
SMC4-225ENST00000497203 HSPB6O14558 160 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 FIBPO43427 364 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 TIMM44O43615 452 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 LIASO43766 372 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 MTA2O94776 668 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 SEC31AO94979 1220 aaKnown RBP4.2□□□□□ -1.74
SMC4-225ENST00000497203 IPO7O95373 1038 aaKnown RBP4.2□□□□□ -1.74
SMC4-225ENST00000497203 TM4SF1P30408 202 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 MAPK4P31152 587 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 TNFSF8P32971 234 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 TTKP33981 857 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 RYKP34925 604 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 PSMB10P40306 273 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 PBX3P40426 434 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 PLCD1P51178 756 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 EFNA5P52803 228 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 HDAC4P56524 1084 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 MC1RQ01726 317 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 NIPAL4Q0D2K0 466 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 CHAF1BQ13112 559 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 AIMP2Q13155 320 aaKnown RBP4.2□□□□□ -1.74
SMC4-225ENST00000497203 OLIG2Q13516 323 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 FRG1Q14331 258 aaKnown RBP4.2□□□□□ -1.74
SMC4-225ENST00000497203 TOMM20Q15388 145 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 MED22Q15528 200 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 EPHA10Q5JZY3 1008 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 HEPHL1Q6MZM0 1159 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 HMBOX1Q6NT76 420 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 TTI2Q6NXR4 508 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 IRF2BP2Q7Z5L9 587 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 LURAP1LQ8IV03 231 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 DENND6AQ8IWF6 608 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 ARHGAP12Q8IWW6 846 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 FAM217AQ8IXS0 508 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 HORMAD2Q8N7B1 307 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 KDM1BQ8NB78 822 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 MPLKIPQ8TAP9 179 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 FAM120BQ96EK7 910 aaKnown RBP4.2□□□□□ -1.74
SMC4-225ENST00000497203 PERPQ96FX8 193 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 NEUROD6Q96NK8 337 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 NCAPGQ9BPX3 1015 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 TRMOQ9BU70 441 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 NUF2Q9BZD4 464 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 CDT1Q9H211 546 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 FOXP1Q9H334 677 aaPredicted RBP4.2□□□□□ -1.74
SMC4-225ENST00000497203 SMARCAD1Q9H4L7 1026 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 SLC6A13Q9NSD5 602 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 MKLN1Q9UL63 735 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 MTMR6Q9Y217 621 aa4.2□□□□□ -1.74
SMC4-225ENST00000497203 AAR2Q9Y312 384 aaKnown RBP4.2□□□□□ -1.74
SMC4-225ENST00000497203 VILLO15195 856 aa4.19□□□□□ -1.74
SMC4-225ENST00000497203 SEC14L5O43304 696 aa4.19□□□□□ -1.74
SMC4-225ENST00000497203 ZC3H11AO75152 810 aaKnown RBP eCLIP4.19□□□□□ -1.74
SMC4-225ENST00000497203 BMP15O95972 392 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms