RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, human

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-210	ENST00000496840	PABPN1L	A6NDY0	278 aa	Known RBP	6.08	□□□□□ -1.44
TARDBP-210	ENST00000496840	IGKV3-20	P01619	116 aa		6.08	□□□□□ -1.44
TARDBP-210	ENST00000496840	DLG1	Q12959	904 aa		6.08	□□□□□ -1.44
TARDBP-210	ENST00000496840	SLC12A1	Q13621	1099 aa		6.08	□□□□□ -1.44
TARDBP-210	ENST00000496840	DHX34	Q14147	1143 aa	Known RBP	6.08	□□□□□ -1.44
TARDBP-210	ENST00000496840	NAA25	Q14CX7	972 aa		6.08	□□□□□ -1.44
TARDBP-210	ENST00000496840	ZRSR1	Q15695	479 aa	Known RBP	6.08	□□□□□ -1.44
TARDBP-210	ENST00000496840	FAM76B	Q5HYJ3	339 aa		6.08	□□□□□ -1.44
TARDBP-210	ENST00000496840	RETSAT	Q6NUM9	610 aa		6.08	□□□□□ -1.44
TARDBP-210	ENST00000496840	CYSLTR2	Q9NS75	346 aa		6.08	□□□□□ -1.44
TARDBP-210	ENST00000496840		A0A0U1RQF3	1178 aa		6.07	□□□□□ -1.44
TARDBP-210	ENST00000496840	DDN	O94850	711 aa	Predicted RBP	6.07	□□□□□ -1.44
TARDBP-210	ENST00000496840	PCNA	P12004	261 aa		6.07	□□□□□ -1.44
TARDBP-210	ENST00000496840	GPD2	P43304	727 aa		6.07	□□□□□ -1.44
TARDBP-210	ENST00000496840	NR1H2	P55055	460 aa		6.07	□□□□□ -1.44
TARDBP-210	ENST00000496840	DLX5	P56178	289 aa		6.07	□□□□□ -1.44
TARDBP-210	ENST00000496840	CALCRL	Q16602	461 aa		6.07	□□□□□ -1.44
TARDBP-210	ENST00000496840	SETMAR	Q53H47	684 aa	Predicted RBP	6.07	□□□□□ -1.44
TARDBP-210	ENST00000496840	ESCO2	Q56NI9	601 aa		6.07	□□□□□ -1.44
TARDBP-210	ENST00000496840	RHBDF2	Q6PJF5	856 aa		6.07	□□□□□ -1.44
TARDBP-210	ENST00000496840	LDHAL6A	Q6ZMR3	332 aa		6.07	□□□□□ -1.44
TARDBP-210	ENST00000496840	MOB3C	Q70IA8	216 aa		6.07	□□□□□ -1.44
TARDBP-210	ENST00000496840	SHF	Q7M4L6	423 aa		6.07	□□□□□ -1.44
TARDBP-210	ENST00000496840	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	6.07	□□□□□ -1.44
TARDBP-210	ENST00000496840	TBC1D26	Q86UD7	250 aa		6.07	□□□□□ -1.44
TARDBP-210	ENST00000496840	LURAP1L	Q8IV03	231 aa		6.07	□□□□□ -1.44
TARDBP-210	ENST00000496840	STAM	Q92783	540 aa		6.07	□□□□□ -1.44
TARDBP-210	ENST00000496840	SCMH1	Q96GD3	660 aa		6.07	□□□□□ -1.44
TARDBP-210	ENST00000496840	ZNF385A	Q96PM9	386 aa	Known RBP	6.07	□□□□□ -1.44
TARDBP-210	ENST00000496840	PKP4	Q99569	1192 aa		6.07	□□□□□ -1.44
TARDBP-210	ENST00000496840	PHF7	Q9BWX1	381 aa	Predicted RBP	6.07	□□□□□ -1.44
TARDBP-210	ENST00000496840	SLC32A1	Q9H598	525 aa		6.07	□□□□□ -1.44
TARDBP-210	ENST00000496840	GOLGA6L10	A0A0M3HER8	536 aa		6.06	□□□□□ -1.44
TARDBP-210	ENST00000496840	KLRF2	D3W0D1	207 aa		6.06	□□□□□ -1.44
TARDBP-210	ENST00000496840	NPIPB11	E5RHQ5	1161 aa		6.06	□□□□□ -1.44
TARDBP-210	ENST00000496840	HSPA12A	O43301	675 aa		6.06	□□□□□ -1.44
TARDBP-210	ENST00000496840	ATP2C2	O75185	946 aa		6.06	□□□□□ -1.44
TARDBP-210	ENST00000496840	NDUFB4	O95168	129 aa		6.06	□□□□□ -1.44
TARDBP-210	ENST00000496840	CHAT	P28329	748 aa		6.06	□□□□□ -1.44
TARDBP-210	ENST00000496840	PPFIA1	Q13136	1202 aa		6.06	□□□□□ -1.44
TARDBP-210	ENST00000496840	RUNX2	Q13950	521 aa		6.06	□□□□□ -1.44
TARDBP-210	ENST00000496840	SOWAHA	Q2M3V2	549 aa		6.06	□□□□□ -1.44
TARDBP-210	ENST00000496840	WFIKKN2	Q8TEU8	576 aa		6.06	□□□□□ -1.44
TARDBP-210	ENST00000496840	DOCK7	Q96N67	2140 aa		6.06	□□□□□ -1.44
TARDBP-210	ENST00000496840	GPR52	Q9Y2T5	361 aa		6.06	□□□□□ -1.44
TARDBP-210	ENST00000496840	A3GALT2	U3KPV4	340 aa		6.06	□□□□□ -1.44
TARDBP-210	ENST00000496840		A0A087WYN8	130 aa		6.05	□□□□□ -1.44
TARDBP-210	ENST00000496840	HSPB2	A8KAH6	182 aa		6.05	□□□□□ -1.44
TARDBP-210	ENST00000496840	RGS11	O94810	467 aa		6.05	□□□□□ -1.44
TARDBP-210	ENST00000496840	F7	P08709	466 aa	Predicted RBP	6.05	□□□□□ -1.44
TARDBP-210	ENST00000496840	SLC2A4	P14672	509 aa		6.05	□□□□□ -1.44
TARDBP-210	ENST00000496840	ITGAX	P20702	1163 aa		6.05	□□□□□ -1.44
TARDBP-210	ENST00000496840	GPT	P24298	496 aa		6.05	□□□□□ -1.44
TARDBP-210	ENST00000496840	HAL	P42357	657 aa		6.05	□□□□□ -1.44
TARDBP-210	ENST00000496840	HDAC4	P56524	1084 aa		6.05	□□□□□ -1.44
TARDBP-210	ENST00000496840	DDR1	Q08345	913 aa		6.05	□□□□□ -1.44
TARDBP-210	ENST00000496840	HSPB2	Q16082	182 aa		6.05	□□□□□ -1.44
TARDBP-210	ENST00000496840	CES5A	Q6NT32	575 aa		6.05	□□□□□ -1.44
TARDBP-210	ENST00000496840	ADGRG6	Q86SQ4	1221 aa		6.05	□□□□□ -1.44
TARDBP-210	ENST00000496840	FAM160B2	Q86V87	743 aa		6.05	□□□□□ -1.44
TARDBP-210	ENST00000496840	GJC3	Q8NFK1	279 aa		6.05	□□□□□ -1.44
TARDBP-210	ENST00000496840	TNIP2	Q8NFZ5	429 aa		6.05	□□□□□ -1.44
TARDBP-210	ENST00000496840	HERVK_113	Q902F9	699 aa		6.05	□□□□□ -1.44
TARDBP-210	ENST00000496840	TRIM63	Q969Q1	353 aa		6.05	□□□□□ -1.44
TARDBP-210	ENST00000496840	MTBP	Q96DY7	904 aa		6.05	□□□□□ -1.44
TARDBP-210	ENST00000496840	ZSCAN31	Q96LW9	406 aa	Predicted RBP	6.05	□□□□□ -1.44
TARDBP-210	ENST00000496840	IL17F	Q96PD4	163 aa		6.05	□□□□□ -1.44
TARDBP-210	ENST00000496840	OR1F2P	Q96R84	312 aa		6.05	□□□□□ -1.44
TARDBP-210	ENST00000496840	EYA3	Q99504	573 aa		6.05	□□□□□ -1.44
TARDBP-210	ENST00000496840	SLCO3A1	Q9UIG8	710 aa		6.05	□□□□□ -1.44
TARDBP-210	ENST00000496840	SAA2-SAA4	A0A096LPE2	208 aa		6.04	□□□□□ -1.44
TARDBP-210	ENST00000496840	IFRD1	O00458	451 aa	Predicted RBP	6.04	□□□□□ -1.44
TARDBP-210	ENST00000496840	BUB3	O43684	328 aa		6.04	□□□□□ -1.44
TARDBP-210	ENST00000496840	PIP5K1C	O60331	668 aa		6.04	□□□□□ -1.44
TARDBP-210	ENST00000496840	CAMTA2	O94983	1202 aa		6.04	□□□□□ -1.44
TARDBP-210	ENST00000496840	SSTR2	P30874	369 aa		6.04	□□□□□ -1.44
TARDBP-210	ENST00000496840	UBE3A	Q05086	875 aa		6.04	□□□□□ -1.44
TARDBP-210	ENST00000496840	ARHGEF6	Q15052	776 aa		6.04	□□□□□ -1.44
TARDBP-210	ENST00000496840	PPP6R3	Q5H9R7	873 aa	Predicted RBP	6.04	□□□□□ -1.44
TARDBP-210	ENST00000496840	ATG16L1	Q676U5	607 aa		6.04	□□□□□ -1.44
TARDBP-210	ENST00000496840	NAGS	Q8N159	534 aa		6.04	□□□□□ -1.44
TARDBP-210	ENST00000496840	PARP16	Q8N5Y8	322 aa		6.04	□□□□□ -1.44
TARDBP-210	ENST00000496840	NR4A3	Q92570	626 aa		6.04	□□□□□ -1.44
TARDBP-210	ENST00000496840	HES6	Q96HZ4	224 aa		6.04	□□□□□ -1.44
TARDBP-210	ENST00000496840	SMARCAL1	Q9NZC9	954 aa		6.04	□□□□□ -1.44
TARDBP-210	ENST00000496840	MALT1	Q9UDY8	824 aa		6.04	□□□□□ -1.44
TARDBP-210	ENST00000496840	NFE2L3	Q9Y4A8	694 aa		6.04	□□□□□ -1.44
TARDBP-210	ENST00000496840	PEX14	O75381	377 aa		6.03	□□□□□ -1.44
TARDBP-210	ENST00000496840	MTA2	O94776	668 aa		6.03	□□□□□ -1.44
TARDBP-210	ENST00000496840	CD58	P19256	250 aa		6.03	□□□□□ -1.44
TARDBP-210	ENST00000496840	CHRND	Q07001	517 aa		6.03	□□□□□ -1.44
TARDBP-210	ENST00000496840	SERTAD4-AS1	Q5TG53	156 aa		6.03	□□□□□ -1.44
TARDBP-210	ENST00000496840	EXOC3L1	Q86VI1	746 aa		6.03	□□□□□ -1.44
TARDBP-210	ENST00000496840	ZC3HC1	Q86WB0	502 aa	Known RBP	6.03	□□□□□ -1.44
TARDBP-210	ENST00000496840	RIC8A	Q9NPQ8	531 aa		6.03	□□□□□ -1.44
TARDBP-210	ENST00000496840	SMYD2	Q9NRG4	433 aa		6.03	□□□□□ -1.44
TARDBP-210	ENST00000496840	CARD8	Q9Y2G2	431 aa		6.03	□□□□□ -1.44
TARDBP-210	ENST00000496840	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	6.03	□□□□□ -1.44
TARDBP-210	ENST00000496840	hDV102S1	A0JD36	115 aa		6.02	□□□□□ -1.45
TARDBP-210	ENST00000496840	TEX22	C9J3V5	150 aa		6.02	□□□□□ -1.45

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms