RNA–Protein interactions for RNA: ENST00000496204.1

RAD50-208, Transcript of RAD50 double strand break repair protein, human

TSL 3

Gene RAD50, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD50-208	ENST00000496204	PATL1	Q86TB9	770 aa	Known RBP	2.57	□□□□□ -2
RAD50-208	ENST00000496204	TICAM2	Q86XR7	235 aa		2.57	□□□□□ -2
RAD50-208	ENST00000496204	PALB2	Q86YC2	1186 aa		2.57	□□□□□ -2
RAD50-208	ENST00000496204	NAGS	Q8N159	534 aa		2.57	□□□□□ -2
RAD50-208	ENST00000496204	TSPYL6	Q8N831	410 aa		2.57	□□□□□ -2
RAD50-208	ENST00000496204	PTGR2	Q8N8N7	351 aa	Predicted RBP	2.57	□□□□□ -2
RAD50-208	ENST00000496204	CSGALNACT1	Q8TDX6	532 aa		2.57	□□□□□ -2
RAD50-208	ENST00000496204	AFG1L	Q8WV93	481 aa		2.57	□□□□□ -2
RAD50-208	ENST00000496204	SORCS1	Q8WY21	1168 aa		2.57	□□□□□ -2
RAD50-208	ENST00000496204	HTRA1	Q92743	480 aa		2.57	□□□□□ -2
RAD50-208	ENST00000496204	TXNDC15	Q96J42	360 aa		2.57	□□□□□ -2
RAD50-208	ENST00000496204	COG8	Q96MW5	612 aa		2.57	□□□□□ -2
RAD50-208	ENST00000496204	PGLYRP2	Q96PD5	576 aa		2.57	□□□□□ -2
RAD50-208	ENST00000496204	TWNK	Q96RR1	684 aa		2.57	□□□□□ -2
RAD50-208	ENST00000496204	SLC26A6	Q9BXS9	759 aa		2.57	□□□□□ -2
RAD50-208	ENST00000496204	CLPB	Q9H078	707 aa		2.57	□□□□□ -2
RAD50-208	ENST00000496204	BRD8	Q9H0E9	1235 aa		2.57	□□□□□ -2
RAD50-208	ENST00000496204	ELAC1	Q9H777	363 aa	Known RBP	2.57	□□□□□ -2
RAD50-208	ENST00000496204	MVB12B	Q9H7P6	319 aa		2.57	□□□□□ -2
RAD50-208	ENST00000496204	JMJD4	Q9H9V9	463 aa		2.57	□□□□□ -2
RAD50-208	ENST00000496204	GRHL1	Q9NZI5	618 aa		2.57	□□□□□ -2
RAD50-208	ENST00000496204	NLK	Q9UBE8	527 aa		2.57	□□□□□ -2
RAD50-208	ENST00000496204	HDAC6	Q9UBN7	1215 aa		2.57	□□□□□ -2
RAD50-208	ENST00000496204	RUSC2	Q8N2Y8	1516 aa		2.57	□□□□□ -2
RAD50-208	ENST00000496204	CKAP5	Q14008	2032 aa		2.56	□□□□□ -2
RAD50-208	ENST00000496204	DOCK7	Q96N67	2140 aa		2.56	□□□□□ -2
RAD50-208	ENST00000496204	KDM4E	B2RXH2	506 aa	Predicted RBP	2.56	□□□□□ -2
RAD50-208	ENST00000496204		B4E171	279 aa		2.56	□□□□□ -2
RAD50-208	ENST00000496204		E7EVH7	732 aa		2.56	□□□□□ -2
RAD50-208	ENST00000496204	MBD4	O95243	580 aa		2.56	□□□□□ -2
RAD50-208	ENST00000496204	TFRC	P02786	760 aa	Known RBP	2.56	□□□□□ -2
RAD50-208	ENST00000496204	CYP4B1	P13584	511 aa		2.56	□□□□□ -2
RAD50-208	ENST00000496204	XBP1	P17861	261 aa		2.56	□□□□□ -2
RAD50-208	ENST00000496204	SERPINA4	P29622	427 aa		2.56	□□□□□ -2
RAD50-208	ENST00000496204	FMO4	P31512	558 aa		2.56	□□□□□ -2
RAD50-208	ENST00000496204	TSPAN7	P41732	249 aa		2.56	□□□□□ -2
RAD50-208	ENST00000496204	LIFR	P42702	1097 aa		2.56	□□□□□ -2
RAD50-208	ENST00000496204	MTNR1A	P48039	350 aa		2.56	□□□□□ -2
RAD50-208	ENST00000496204	RPS6KA3	P51812	740 aa		2.56	□□□□□ -2
RAD50-208	ENST00000496204	NR1H2	P55055	460 aa		2.56	□□□□□ -2
RAD50-208	ENST00000496204	BRWD1-AS2	P59051	145 aa		2.56	□□□□□ -2
RAD50-208	ENST00000496204	CYP4A11	Q02928	519 aa		2.56	□□□□□ -2
RAD50-208	ENST00000496204	TRPC3	Q13507	836 aa		2.56	□□□□□ -2
RAD50-208	ENST00000496204	MAP3K21	Q5TCX8	1036 aa		2.56	□□□□□ -2
RAD50-208	ENST00000496204	DSTYK	Q6XUX3	929 aa		2.56	□□□□□ -2
RAD50-208	ENST00000496204	RSRC2	Q7L4I2	434 aa	Known RBP	2.56	□□□□□ -2
RAD50-208	ENST00000496204	RRAGA	Q7L523	313 aa		2.56	□□□□□ -2
RAD50-208	ENST00000496204	TBC1D1	Q86TI0	1168 aa	Predicted RBP	2.56	□□□□□ -2
RAD50-208	ENST00000496204	TMC8	Q8IU68	726 aa		2.56	□□□□□ -2
RAD50-208	ENST00000496204	PCYOX1L	Q8NBM8	494 aa		2.56	□□□□□ -2
RAD50-208	ENST00000496204	POC1A	Q8NBT0	407 aa		2.56	□□□□□ -2
RAD50-208	ENST00000496204	RFWD2	Q8NHY2	731 aa		2.56	□□□□□ -2
RAD50-208	ENST00000496204	TAF15	Q92804	592 aa	Known RBP eCLIP	2.56	□□□□□ -2
RAD50-208	ENST00000496204	BICD1	Q96G01	975 aa		2.56	□□□□□ -2
RAD50-208	ENST00000496204	CXorf56	Q9H5V9	222 aa		2.56	□□□□□ -2
RAD50-208	ENST00000496204	NOD2	Q9HC29	1040 aa		2.56	□□□□□ -2
RAD50-208	ENST00000496204	THAP1	Q9NVV9	213 aa		2.56	□□□□□ -2
RAD50-208	ENST00000496204	NDUFAF4	Q9P032	175 aa		2.56	□□□□□ -2
RAD50-208	ENST00000496204	KCND3	Q9UK17	655 aa		2.56	□□□□□ -2
RAD50-208	ENST00000496204	DERA	Q9Y315	318 aa		2.56	□□□□□ -2
RAD50-208	ENST00000496204	SAA2-SAA4	A0A096LPE2	208 aa		2.55	□□□□□ -2
RAD50-208	ENST00000496204	FAM157A	C9JC47	383 aa		2.55	□□□□□ -2
RAD50-208	ENST00000496204		F5H0A9	414 aa	Predicted RBP	2.55	□□□□□ -2
RAD50-208	ENST00000496204	CHL1	O00533	1208 aa		2.55	□□□□□ -2
RAD50-208	ENST00000496204	SYN3	O14994	580 aa		2.55	□□□□□ -2
RAD50-208	ENST00000496204	XPNPEP2	O43895	674 aa		2.55	□□□□□ -2
RAD50-208	ENST00000496204	LMX1B	O60663	402 aa		2.55	□□□□□ -2
RAD50-208	ENST00000496204	DDX58	O95786	925 aa	Known RBP	2.55	□□□□□ -2
RAD50-208	ENST00000496204	LDHC	P07864	332 aa		2.55	□□□□□ -2
RAD50-208	ENST00000496204	ATP1A3	P13637	1013 aa		2.55	□□□□□ -2
RAD50-208	ENST00000496204	RXRA	P19793	462 aa		2.55	□□□□□ -2
RAD50-208	ENST00000496204	MCM2	P49736	904 aa		2.55	□□□□□ -2
RAD50-208	ENST00000496204	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	2.55	□□□□□ -2
RAD50-208	ENST00000496204	ACSM2A	Q08AH3	577 aa		2.55	□□□□□ -2
RAD50-208	ENST00000496204	FAM27E3	Q08E93	113 aa		2.55	□□□□□ -2
RAD50-208	ENST00000496204	SLC12A1	Q13621	1099 aa		2.55	□□□□□ -2
RAD50-208	ENST00000496204	DHX34	Q14147	1143 aa	Known RBP	2.55	□□□□□ -2
RAD50-208	ENST00000496204	RPE65	Q16518	533 aa		2.55	□□□□□ -2
RAD50-208	ENST00000496204	XKR9	Q5GH70	373 aa		2.55	□□□□□ -2
RAD50-208	ENST00000496204	FAAH2	Q6GMR7	532 aa		2.55	□□□□□ -2
RAD50-208	ENST00000496204	TYW3	Q6IPR3	259 aa	Known RBP	2.55	□□□□□ -2
RAD50-208	ENST00000496204	MZT2B	Q6NZ67	158 aa		2.55	□□□□□ -2
RAD50-208	ENST00000496204	FAM180B	Q6P0A1	224 aa		2.55	□□□□□ -2
RAD50-208	ENST00000496204	C9orf139	Q6ZV77	190 aa		2.55	□□□□□ -2
RAD50-208	ENST00000496204	HEATR4	Q86WZ0	1026 aa		2.55	□□□□□ -2
RAD50-208	ENST00000496204	TMEM57	Q8N5G2	664 aa		2.55	□□□□□ -2
RAD50-208	ENST00000496204	AADAT	Q8N5Z0	425 aa		2.55	□□□□□ -2
RAD50-208	ENST00000496204	USP38	Q8NB14	1042 aa		2.55	□□□□□ -2
RAD50-208	ENST00000496204	MCPH1	Q8NEM0	835 aa		2.55	□□□□□ -2
RAD50-208	ENST00000496204	RFFL	Q8WZ73	363 aa		2.55	□□□□□ -2
RAD50-208	ENST00000496204	CPT1B	Q92523	772 aa		2.55	□□□□□ -2
RAD50-208	ENST00000496204	HDAC2	Q92769	488 aa	Known RBP	2.55	□□□□□ -2
RAD50-208	ENST00000496204	ATOH1	Q92858	354 aa	Predicted RBP	2.55	□□□□□ -2
RAD50-208	ENST00000496204	C3orf49	Q96BT1	292 aa		2.55	□□□□□ -2
RAD50-208	ENST00000496204	HVCN1	Q96D96	273 aa		2.55	□□□□□ -2
RAD50-208	ENST00000496204	REEP2	Q9BRK0	252 aa		2.55	□□□□□ -2
RAD50-208	ENST00000496204	AGXT2	Q9BYV1	514 aa		2.55	□□□□□ -2
RAD50-208	ENST00000496204	CHODL	Q9H9P2	273 aa		2.55	□□□□□ -2
RAD50-208	ENST00000496204	WDR6	Q9NNW5	1121 aa	Known RBP	2.55	□□□□□ -2
RAD50-208	ENST00000496204	TMEM51	Q9NW97	253 aa		2.55	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms