RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 YKT6O15498 198 aa16.53■□□□□ 0.24
SF3A1-209ENST00000496189 INSIG1O15503 277 aa16.53■□□□□ 0.24
SF3A1-209ENST00000496189 ZNF883P0CG24 379 aa16.53■□□□□ 0.24
SF3A1-209ENST00000496189 PRLRP16471 622 aa16.53■□□□□ 0.24
SF3A1-209ENST00000496189 CA4P22748 312 aa16.53■□□□□ 0.24
SF3A1-209ENST00000496189 CES1P23141 567 aa16.53■□□□□ 0.24
SF3A1-209ENST00000496189 CTNNA2P26232 953 aa16.53■□□□□ 0.24
SF3A1-209ENST00000496189 CCT8P50990 548 aa16.53■□□□□ 0.24
SF3A1-209ENST00000496189 RWDD2BP57060 319 aa16.53■□□□□ 0.24
SF3A1-209ENST00000496189 COPS2P61201 443 aa16.53■□□□□ 0.24
SF3A1-209ENST00000496189 PDK1Q15118 436 aa16.53■□□□□ 0.24
SF3A1-209ENST00000496189 KIF19Q2TAC6 998 aa16.53■□□□□ 0.24
SF3A1-209ENST00000496189 INAVAQ3KP66 663 aa16.53■□□□□ 0.24
SF3A1-209ENST00000496189 PPM1JQ5JR12 505 aa16.53■□□□□ 0.24
SF3A1-209ENST00000496189 NT5DC3Q86UY8 548 aa16.53■□□□□ 0.24
SF3A1-209ENST00000496189 CAMK1DQ8IU85 385 aa16.53■□□□□ 0.24
SF3A1-209ENST00000496189 NDUFAF2Q8N183 169 aa16.53■□□□□ 0.24
SF3A1-209ENST00000496189 KLK6Q92876 244 aa16.53■□□□□ 0.24
SF3A1-209ENST00000496189 KLHDC7BQ96G42 594 aa16.53■□□□□ 0.24
SF3A1-209ENST00000496189 NUDCD1Q96RS6 583 aa16.53■□□□□ 0.24
SF3A1-209ENST00000496189 ORAI3Q9BRQ5 295 aa16.53■□□□□ 0.24
SF3A1-209ENST00000496189 BRD8Q9H0E9 1235 aa16.53■□□□□ 0.24
SF3A1-209ENST00000496189 EBF2Q9HAK2 575 aa16.53■□□□□ 0.24
SF3A1-209ENST00000496189 NT5MQ9NPB1 228 aa16.53■□□□□ 0.24
SF3A1-209ENST00000496189 TM7SF3Q9NS93 570 aa16.53■□□□□ 0.24
SF3A1-209ENST00000496189 PCDHB9Q9Y5E1 797 aa16.53■□□□□ 0.24
SF3A1-209ENST00000496189 SNX11Q9Y5W9 270 aa16.53■□□□□ 0.24
SF3A1-209ENST00000496189 ADAMTS9Q9P2N4 1935 aa16.53■□□□□ 0.24
SF3A1-209ENST00000496189 PCDH15Q96QU1 1955 aa16.52■□□□□ 0.24
SF3A1-209ENST00000496189 C3orf70A6NLC5 250 aaPredicted RBP16.52■□□□□ 0.24
SF3A1-209ENST00000496189 TLR4O00206 839 aa16.52■□□□□ 0.24
SF3A1-209ENST00000496189 RNF103O00237 685 aa16.52■□□□□ 0.24
SF3A1-209ENST00000496189 FPGTO14772 594 aa16.52■□□□□ 0.24
SF3A1-209ENST00000496189 SOCS5O75159 536 aa16.52■□□□□ 0.24
SF3A1-209ENST00000496189 CSRP1P21291 193 aaKnown RBP16.52■□□□□ 0.24
SF3A1-209ENST00000496189 ABL2P42684 1182 aa16.52■□□□□ 0.24
SF3A1-209ENST00000496189 CTSKP43235 329 aa16.52■□□□□ 0.24
SF3A1-209ENST00000496189 NOVA1P51513 510 aaKnown RBP16.52■□□□□ 0.24
SF3A1-209ENST00000496189 DYNLT1P63172 113 aa16.52■□□□□ 0.24
SF3A1-209ENST00000496189 GBE1Q04446 702 aa16.52■□□□□ 0.24
SF3A1-209ENST00000496189 UGP2Q16851 508 aa16.52■□□□□ 0.24
SF3A1-209ENST00000496189 ZNF284Q2VY69 593 aa16.52■□□□□ 0.24
SF3A1-209ENST00000496189 TMEM259Q4ZIN3 620 aa16.52■□□□□ 0.24
SF3A1-209ENST00000496189 TFDP3Q5H9I0 405 aa16.52■□□□□ 0.24
SF3A1-209ENST00000496189 SEL1L3Q68CR1 1132 aa16.52■□□□□ 0.24
SF3A1-209ENST00000496189 LAYNQ6UX15 382 aa16.52■□□□□ 0.24
SF3A1-209ENST00000496189 CCDC13Q8IYE1 715 aa16.52■□□□□ 0.24
SF3A1-209ENST00000496189 PQLC3Q8N755 202 aa16.52■□□□□ 0.24
SF3A1-209ENST00000496189 OR2I1PQ8NGU4 316 aa16.52■□□□□ 0.24
SF3A1-209ENST00000496189 PDCD6IPQ8WUM4 868 aaKnown RBP16.52■□□□□ 0.24
SF3A1-209ENST00000496189 FATE1Q969F0 183 aa16.52■□□□□ 0.24
SF3A1-209ENST00000496189 HDAC11Q96DB2 347 aa16.52■□□□□ 0.24
SF3A1-209ENST00000496189 TSGA13Q96PP4 275 aa16.52■□□□□ 0.24
SF3A1-209ENST00000496189 MYOCQ99972 504 aa16.52■□□□□ 0.24
SF3A1-209ENST00000496189 MGME1Q9BQP7 344 aa16.52■□□□□ 0.24
SF3A1-209ENST00000496189 DTLQ9NZJ0 730 aa16.52■□□□□ 0.24
SF3A1-209ENST00000496189 ZFR2Q9UPR6 939 aaKnown RBP16.52■□□□□ 0.24
SF3A1-209ENST00000496189 SLCO1B1Q9Y6L6 691 aa16.52■□□□□ 0.24
SF3A1-209ENST00000496189 CEP250Q9BV73 2442 aa16.52■□□□□ 0.24
SF3A1-209ENST00000496189 DMXL1Q9Y485 3027 aa16.52■□□□□ 0.23
SF3A1-209ENST00000496189 SPTBN4Q9H254 2564 aa16.51■□□□□ 0.23
SF3A1-209ENST00000496189 PLXNA2O75051 1894 aa16.51■□□□□ 0.23
SF3A1-209ENST00000496189 TSPAN11A1L157 253 aa16.51■□□□□ 0.23
SF3A1-209ENST00000496189 A6NNZ2 444 aa16.51■□□□□ 0.23
SF3A1-209ENST00000496189 C10orf142B7Z368 130 aa16.51■□□□□ 0.23
SF3A1-209ENST00000496189 AREL1O15033 823 aa16.51■□□□□ 0.23
SF3A1-209ENST00000496189 TM7SF2O76062 418 aa16.51■□□□□ 0.23
SF3A1-209ENST00000496189 MAP3K6O95382 1288 aa16.51■□□□□ 0.23
SF3A1-209ENST00000496189 PAK4O96013 591 aaPredicted RBP16.51■□□□□ 0.23
SF3A1-209ENST00000496189 CEACAM1P13688 526 aa16.51■□□□□ 0.23
SF3A1-209ENST00000496189 CCNB1P14635 433 aa16.51■□□□□ 0.23
SF3A1-209ENST00000496189 TIMP2P16035 220 aa16.51■□□□□ 0.23
SF3A1-209ENST00000496189 CDKN2BP42772 138 aa16.51■□□□□ 0.23
SF3A1-209ENST00000496189 RGRP47804 291 aa16.51■□□□□ 0.23
SF3A1-209ENST00000496189 NR2C2P49116 596 aa16.51■□□□□ 0.23
SF3A1-209ENST00000496189 FAM193AP78312 1265 aa16.51■□□□□ 0.23
SF3A1-209ENST00000496189 AP1B1Q10567 949 aa16.51■□□□□ 0.23
SF3A1-209ENST00000496189 LRRC73Q5JTD7 316 aa16.51■□□□□ 0.23
SF3A1-209ENST00000496189 CCDC181Q5TID7 509 aa16.51■□□□□ 0.23
SF3A1-209ENST00000496189 KAZNQ674X7 775 aa16.51■□□□□ 0.23
SF3A1-209ENST00000496189 SLC9A4Q6AI14 798 aa16.51■□□□□ 0.23
SF3A1-209ENST00000496189 MFSD7Q6UXD7 560 aa16.51■□□□□ 0.23
SF3A1-209ENST00000496189 SPOCD1Q6ZMY3 1216 aa16.51■□□□□ 0.23
SF3A1-209ENST00000496189 DCP2Q8IU60 420 aaKnown RBP16.51■□□□□ 0.23
SF3A1-209ENST00000496189 DENND6BQ8NEG7 585 aa16.51■□□□□ 0.23
SF3A1-209ENST00000496189 TRIM58Q8NG06 486 aa16.51■□□□□ 0.23
SF3A1-209ENST00000496189 SETD7Q8WTS6 366 aaKnown RBP16.51■□□□□ 0.23
SF3A1-209ENST00000496189 ASB12Q8WXK4 309 aa16.51■□□□□ 0.23
SF3A1-209ENST00000496189 KRT35Q92764 455 aa16.51■□□□□ 0.23
SF3A1-209ENST00000496189 RBM22Q9NW64 420 aaKnown RBP eCLIP16.51■□□□□ 0.23
SF3A1-209ENST00000496189 ITM2BQ9Y287 266 aa16.51■□□□□ 0.23
SF3A1-209ENST00000496189 ATP8A1Q9Y2Q0 1164 aa16.51■□□□□ 0.23
SF3A1-209ENST00000496189 PCDHGB2Q9Y5G2 931 aa16.51■□□□□ 0.23
SF3A1-209ENST00000496189 HS3ST3A1Q9Y663 406 aa16.51■□□□□ 0.23
SF3A1-209ENST00000496189 CAPN6Q9Y6Q1 641 aa16.51■□□□□ 0.23
SF3A1-209ENST00000496189 A0A1W2PR77 199 aa16.5■□□□□ 0.23
SF3A1-209ENST00000496189 IGLON5A6NGN9 336 aa16.5■□□□□ 0.23
SF3A1-209ENST00000496189 MUSKO15146 869 aa16.5■□□□□ 0.23
SF3A1-209ENST00000496189 FLRT2O43155 660 aa16.5■□□□□ 0.23
SF3A1-209ENST00000496189 KCNK5O95279 499 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms