RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 RSPO4Q2I0M5 234 aaPredicted RBP9.92□□□□□ -0.82
CALD1-223ENST00000496024 UAP1L1Q3KQV9 507 aa9.92□□□□□ -0.82
CALD1-223ENST00000496024 SETMARQ53H47 684 aaPredicted RBP9.92□□□□□ -0.82
CALD1-223ENST00000496024 RABEPKQ7Z6M1 372 aa9.92□□□□□ -0.82
CALD1-223ENST00000496024 ZC3H18Q86VM9 953 aaKnown RBP9.92□□□□□ -0.82
CALD1-223ENST00000496024 HORMAD1Q86X24 394 aa9.92□□□□□ -0.82
CALD1-223ENST00000496024 ZSWIM9Q86XI8 627 aa9.92□□□□□ -0.82
CALD1-223ENST00000496024 TEX26Q8N6G2 289 aa9.92□□□□□ -0.82
CALD1-223ENST00000496024 UBL4BQ8N7F7 174 aa9.92□□□□□ -0.82
CALD1-223ENST00000496024 MAML1Q92585 1016 aa9.92□□□□□ -0.82
CALD1-223ENST00000496024 P3H4Q92791 437 aa9.92□□□□□ -0.82
CALD1-223ENST00000496024 FEM1CQ96JP0 617 aa9.92□□□□□ -0.82
CALD1-223ENST00000496024 ZNF641Q96N77 438 aaPredicted RBP9.92□□□□□ -0.82
CALD1-223ENST00000496024 NUDCD1Q96RS6 583 aa9.92□□□□□ -0.82
CALD1-223ENST00000496024 TUBGCP5Q96RT8 1024 aa9.92□□□□□ -0.82
CALD1-223ENST00000496024 FAM118BQ9BPY3 351 aa9.92□□□□□ -0.82
CALD1-223ENST00000496024 MGME1Q9BQP7 344 aa9.92□□□□□ -0.82
CALD1-223ENST00000496024 ORAI3Q9BRQ5 295 aa9.92□□□□□ -0.82
CALD1-223ENST00000496024 HERPUD2Q9BSE4 406 aa9.92□□□□□ -0.82
CALD1-223ENST00000496024 CAPN10Q9HC96 672 aa9.92□□□□□ -0.82
CALD1-223ENST00000496024 FZD3Q9NPG1 666 aa9.92□□□□□ -0.82
CALD1-223ENST00000496024 PCDH12Q9NPG4 1184 aa9.92□□□□□ -0.82
CALD1-223ENST00000496024 DKK3Q9UBP4 350 aa9.92□□□□□ -0.82
CALD1-223ENST00000496024 CA5BQ9Y2D0 317 aa9.92□□□□□ -0.82
CALD1-223ENST00000496024 TMEM131Q92545 1883 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 TDRD6O60522 2096 aaKnown RBP9.91□□□□□ -0.82
CALD1-223ENST00000496024 LRRK1Q38SD2 2015 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.91□□□□□ -0.82
CALD1-223ENST00000496024 IGLON5A6NGN9 336 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 GOLGA8CPA6NN73 597 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 C4orf47A7E2U8 309 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 A8MX80 341 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 MIF4GDA9UHW6 222 aaKnown RBP9.91□□□□□ -0.82
CALD1-223ENST00000496024 UPK3BL1B0FP48 263 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 PRR5-ARHGAP8B1AHC4 643 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 UPK3BL2E5RIL1 263 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 ARHGAP33O14559 1287 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 KCNK3O14649 394 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 DDX3YO15523 660 aaKnown RBP9.91□□□□□ -0.82
CALD1-223ENST00000496024 SPINT1O43278 529 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 FOXD2O60548 495 aaPredicted RBP9.91□□□□□ -0.82
CALD1-223ENST00000496024 MMP20O60882 483 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 PAK4O96013 591 aaPredicted RBP9.91□□□□□ -0.82
CALD1-223ENST00000496024 CR2P20023 1033 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 NR2C2P49116 596 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 AFF3P51826 1226 aaKnown RBP9.91□□□□□ -0.82
CALD1-223ENST00000496024 COPS2P61201 443 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 RPS21P63220 83 aaKnown RBP9.91□□□□□ -0.82
CALD1-223ENST00000496024 RACK1P63244 317 aaKnown RBP9.91□□□□□ -0.82
CALD1-223ENST00000496024 FAM193AP78312 1265 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 ARHGAP8P85298 464 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 TRAF2Q12933 501 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 GRIK2Q13002 908 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 GSE1Q14687 1217 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 TEAD4Q15561 434 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 PPP2R5EQ16537 467 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 UGP2Q16851 508 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 ZNF284Q2VY69 593 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 STPG1Q5TH74 334 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 BBS12Q6ZW61 710 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 BZW1Q7L1Q6 419 aaKnown RBP9.91□□□□□ -0.82
CALD1-223ENST00000496024 TRIM69Q86WT6 500 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 C1orf216Q8TAB5 229 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 CXorf40AQ8TE69 158 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 RAB7BQ96AH8 199 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 AGAP3Q96P47 875 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 OLFM3Q96PB7 478 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 SLC17A9Q9BYT1 436 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 OSBPL8Q9BZF1 889 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 POLR1EQ9GZS1 481 aaKnown RBP9.91□□□□□ -0.82
CALD1-223ENST00000496024 C10orf88Q9H8K7 445 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 TMEM9BQ9NQ34 198 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 CDV3Q9UKY7 258 aaKnown RBP9.91□□□□□ -0.82
CALD1-223ENST00000496024 PPP2R2CQ9Y2T4 447 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 COQ6Q9Y2Z9 468 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 PCDHB9Q9Y5E1 797 aa9.91□□□□□ -0.82
CALD1-223ENST00000496024 TP53BP1Q12888 1972 aaPredicted RBP9.91□□□□□ -0.82
CALD1-223ENST00000496024 PCDH15Q96QU1 1955 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 F5H423 210 aaPredicted RBP9.9□□□□□ -0.82
CALD1-223ENST00000496024 H7C0C1 242 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 AREL1O15033 823 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 LATO43561 262 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 TSPAN6O43657 245 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 AP1G1O43747 822 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 CPP00450 1065 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 WNT1P04628 370 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 SYPP08247 313 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 CD38P28907 300 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 ATP5OP48047 213 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 C21orf59P57076 290 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 CLDN2P57739 230 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 IFI35P80217 286 aaPredicted RBP9.9□□□□□ -0.82
CALD1-223ENST00000496024 OTUD4Q01804 1114 aaKnown RBP9.9□□□□□ -0.82
CALD1-223ENST00000496024 BNC1Q01954 994 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 NIPAL4Q0D2K0 466 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 ELP6Q0PNE2 266 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 SGCGQ13326 291 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 FGL2Q14314 439 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 STAT4Q14765 748 aa9.9□□□□□ -0.82
CALD1-223ENST00000496024 KIF19Q2TAC6 998 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms