RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 DAB2IPQ5VWQ8 1189 aa4.53□□□□□ -1.68
VPS52-222ENST00000495981 ALKAL1Q6UXT8 129 aa4.53□□□□□ -1.68
VPS52-222ENST00000495981 ZNF783Q6ZMS7 281 aa4.53□□□□□ -1.68
VPS52-222ENST00000495981 USP49Q70CQ1 688 aa4.53□□□□□ -1.68
VPS52-222ENST00000495981 LARP4Q71RC2 724 aaKnown RBP eCLIP4.53□□□□□ -1.68
VPS52-222ENST00000495981 RTL10Q7L3V2 364 aa4.53□□□□□ -1.68
VPS52-222ENST00000495981 CEP57Q86XR8 500 aa4.53□□□□□ -1.68
VPS52-222ENST00000495981 ESX1Q8N693 406 aa4.53□□□□□ -1.68
VPS52-222ENST00000495981 TTC9BQ8N6N2 239 aa4.53□□□□□ -1.68
VPS52-222ENST00000495981 IL17RDQ8NFM7 739 aa4.53□□□□□ -1.68
VPS52-222ENST00000495981 SPATA18Q8TC71 538 aa4.53□□□□□ -1.68
VPS52-222ENST00000495981 WASF1Q92558 559 aa4.53□□□□□ -1.68
VPS52-222ENST00000495981 C18orf25Q96B23 403 aaPredicted RBP4.53□□□□□ -1.68
VPS52-222ENST00000495981 EID2BQ96D98 161 aa4.53□□□□□ -1.68
VPS52-222ENST00000495981 CCDC43Q96MW1 224 aaKnown RBP4.53□□□□□ -1.68
VPS52-222ENST00000495981 LRRC3BQ96PB8 259 aa4.53□□□□□ -1.68
VPS52-222ENST00000495981 MYOCQ99972 504 aa4.53□□□□□ -1.68
VPS52-222ENST00000495981 POLR3CQ9BUI4 534 aaPredicted RBP4.53□□□□□ -1.68
VPS52-222ENST00000495981 ZNF518BQ9C0D4 1074 aa4.53□□□□□ -1.68
VPS52-222ENST00000495981 TRPV4Q9HBA0 871 aa4.53□□□□□ -1.68
VPS52-222ENST00000495981 TMEM8AQ9HCN3 771 aa4.53□□□□□ -1.68
VPS52-222ENST00000495981 ZNF334Q9HCZ1 680 aaPredicted RBP4.53□□□□□ -1.68
VPS52-222ENST00000495981 TMEM9BQ9NQ34 198 aa4.53□□□□□ -1.68
VPS52-222ENST00000495981 WASH6PQ9NQA3 447 aa4.53□□□□□ -1.68
VPS52-222ENST00000495981 TRPV5Q9NQA5 729 aa4.53□□□□□ -1.68
VPS52-222ENST00000495981 NECTIN3Q9NQS3 549 aa4.53□□□□□ -1.68
VPS52-222ENST00000495981 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.53□□□□□ -1.68
VPS52-222ENST00000495981 BLOC1S4Q9NUP1 217 aa4.53□□□□□ -1.68
VPS52-222ENST00000495981 CLIC5Q9NZA1 410 aa4.53□□□□□ -1.68
VPS52-222ENST00000495981 GDE1Q9NZC3 331 aa4.53□□□□□ -1.68
VPS52-222ENST00000495981 MBD1Q9UIS9 605 aaPredicted RBP4.53□□□□□ -1.68
VPS52-222ENST00000495981 PCDHA12Q9UN75 941 aa4.53□□□□□ -1.68
VPS52-222ENST00000495981 YIPF1Q9Y548 306 aa4.53□□□□□ -1.68
VPS52-222ENST00000495981 PCDHGA5Q9Y5G8 931 aa4.53□□□□□ -1.68
VPS52-222ENST00000495981 PIAS3Q9Y6X2 628 aa4.53□□□□□ -1.68
VPS52-222ENST00000495981 AHCTF1Q8WYP5 2266 aa4.53□□□□□ -1.68
VPS52-222ENST00000495981 SPENQ96T58 3664 aaKnown RBP4.53□□□□□ -1.68
VPS52-222ENST00000495981 SPAG17Q6Q759 2223 aa4.53□□□□□ -1.68
VPS52-222ENST00000495981 NAV3Q8IVL0 2385 aa4.53□□□□□ -1.68
VPS52-222ENST00000495981 TCHHQ07283 1943 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 PLXND1Q9Y4D7 1925 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 CABIN1Q9Y6J0 2220 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 SCN1AP35498 2009 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 ARHGEF35A5YM69 484 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 A6NCN8 305 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 MBD3L4A6NDZ8 208 aaPredicted RBP4.52□□□□□ -1.69
VPS52-222ENST00000495981 MBD3L3A6NE82 208 aaPredicted RBP4.52□□□□□ -1.69
VPS52-222ENST00000495981 PP2D1A8MPX8 630 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 KIAA1324LA8MWY0 1029 aaPredicted RBP4.52□□□□□ -1.69
VPS52-222ENST00000495981 PIP5K1BO14986 540 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 IRAK2O43187 625 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 FAM155BO75949 473 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 BAG4O95429 457 aaKnown RBP4.52□□□□□ -1.69
VPS52-222ENST00000495981 PRAMEF12O95522 483 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 CXCL8P10145 99 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 NCAM1P13591 858 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 VIPR1P32241 457 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 VIPR2P41587 438 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 NPTX2P47972 431 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 CD97P48960 835 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 EFNA5P52803 228 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 MLLT6P55198 1093 aaPredicted RBP4.52□□□□□ -1.69
VPS52-222ENST00000495981 ADAM8P78325 824 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 GUCY1B3Q02153 619 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 FCHO2Q0JRZ9 810 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 SEMA3BQ13214 749 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 SP140Q13342 867 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 TAF12Q16514 161 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 TIGD6Q17RP2 521 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 STXBP5Q5T5C0 1151 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 DCAF12L1Q5VU92 463 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 AFMIDQ63HM1 303 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 HAUS3Q68CZ6 603 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 NAIF1Q69YI7 327 aaPredicted RBP4.52□□□□□ -1.69
VPS52-222ENST00000495981 HIST2H2BCQ6DN03 193 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 MZT2BQ6NZ67 158 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 MPZL3Q6UWV2 235 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 KIAA0408Q6ZU52 694 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 RNF44Q7L0R7 432 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 B3GNT8Q7Z7M8 397 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 HEATR4Q86WZ0 1026 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 TMEFF1Q8IYR6 380 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 C4orf32Q8N8J7 132 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 ZNF461Q8TAF7 563 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 LRRC15Q8TF66 581 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 DEPDC1BQ8WUY9 529 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 KIFAP3Q92845 792 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 SMARCD2Q92925 531 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 KCNN1Q92952 543 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 LRRC46Q96FV0 321 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 NOX5Q96PH1 765 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 ADPGKQ9BRR6 497 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 MMTAG2Q9BU76 263 aaKnown RBP4.52□□□□□ -1.69
VPS52-222ENST00000495981 C11orf54Q9H0W9 315 aaPredicted RBP4.52□□□□□ -1.69
VPS52-222ENST00000495981 TMEM140Q9NV12 185 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 CEP72Q9P209 647 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 FBXO2Q9UK22 296 aaPredicted RBP4.52□□□□□ -1.69
VPS52-222ENST00000495981 FBXO10Q9UK96 956 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 FBXL5Q9UKA1 691 aa4.52□□□□□ -1.69
VPS52-222ENST00000495981 SLC45A2Q9UMX9 530 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms