RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 COL2A1P02458 1487 aaPredicted RBP13.55□□□□□ -0.24
GPC1-209ENST00000495100 FKBP6O75344 327 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 ACVRL1P37023 503 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 TBX4P57082 545 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 LRRC73Q5JTD7 316 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 ZBTB49Q6ZSB9 765 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 RAB44Q7Z6P3 723 aaPredicted RBP13.55□□□□□ -0.24
GPC1-209ENST00000495100 ZNF280BQ86YH2 543 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 SPPL2CQ8IUH8 684 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 HIC2Q96JB3 615 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 PKP2Q99959 881 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 MUC3BQ9H195 1237 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 UPF3AQ9H1J1 476 aaKnown RBP13.55□□□□□ -0.24
GPC1-209ENST00000495100 GBA3Q9H227 469 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 CD274Q9NZQ7 290 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 FAF1Q9UNN5 650 aaPredicted RBP13.55□□□□□ -0.24
GPC1-209ENST00000495100 ANGPTL3Q9Y5C1 460 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 PCDHB12Q9Y5F1 795 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 COPG1Q9Y678 874 aaKnown RBP13.55□□□□□ -0.24
GPC1-209ENST00000495100 ZCWPW2A0A1B0GU75 182 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 ARHGEF37A1IGU5 675 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 E7ENX8 843 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 ENPP3O14638 875 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 SRP72O76094 671 aaKnown RBP13.55□□□□□ -0.24
GPC1-209ENST00000495100 CTPS1P17812 591 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 NFKBIAP25963 317 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 YAP1P46937 504 aaKnown RBP13.55□□□□□ -0.24
GPC1-209ENST00000495100 ARSDP51689 593 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 PCID2Q5JVF3 399 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 GLB1LQ6UWU2 654 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 CUZD1Q86UP6 607 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 RALGPS2Q86X27 583 aaPredicted RBP13.55□□□□□ -0.24
GPC1-209ENST00000495100 PQLC1Q8N2U9 271 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 NCLNQ969V3 563 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 LZTS1Q9Y250 596 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 THSD7AQ9UPZ6 1657 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 CROCCQ5TZA2 2017 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.55□□□□□ -0.24
GPC1-209ENST00000495100 CAPN14A8MX76 684 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 GNGT2O14610 69 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 SNX2O60749 519 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 MTHFD1P11586 935 aaKnown RBP13.55□□□□□ -0.24
GPC1-209ENST00000495100 SLC18A1P54219 525 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 UGP2Q16851 508 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 ARMC12Q5T9G4 340 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 PKN3Q6P5Z2 889 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 LGI2Q8N0V4 545 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 ADNPQ9H2P0 1102 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 RHOJQ9H4E5 214 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 SLC38A7Q9NVC3 462 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 RAP2CQ9Y3L5 183 aa13.55□□□□□ -0.24
GPC1-209ENST00000495100 TRIP12Q14669 1992 aaPredicted RBP13.55□□□□□ -0.24
GPC1-209ENST00000495100 ARHGAP10A1A4S6 786 aa13.54□□□□□ -0.24
GPC1-209ENST00000495100 MAGEC1O60732 1142 aa13.54□□□□□ -0.24
GPC1-209ENST00000495100 GABRB3P28472 473 aa13.54□□□□□ -0.24
GPC1-209ENST00000495100 PPARGP37231 505 aaPredicted RBP13.54□□□□□ -0.24
GPC1-209ENST00000495100 DUSP4Q13115 394 aa13.54□□□□□ -0.24
GPC1-209ENST00000495100 CEACAM7Q14002 265 aa13.54□□□□□ -0.24
GPC1-209ENST00000495100 POLD3Q15054 466 aaPredicted RBP13.54□□□□□ -0.24
GPC1-209ENST00000495100 POM121L1PQ3SYA9 428 aa13.54□□□□□ -0.24
GPC1-209ENST00000495100 PKDCCQ504Y2 493 aa13.54□□□□□ -0.24
GPC1-209ENST00000495100 AGAP9Q5VTM2 703 aa13.54□□□□□ -0.24
GPC1-209ENST00000495100 SH2D5Q6ZV89 423 aa13.54□□□□□ -0.24
GPC1-209ENST00000495100 DEFB128Q7Z7B8 93 aa13.54□□□□□ -0.24
GPC1-209ENST00000495100 CDYL2Q8N8U2 506 aa13.54□□□□□ -0.24
GPC1-209ENST00000495100 CLHC1Q8NHS4 586 aa13.54□□□□□ -0.24
GPC1-209ENST00000495100 LPGAT1Q92604 370 aa13.54□□□□□ -0.24
GPC1-209ENST00000495100 LATS2Q9NRM7 1088 aa13.54□□□□□ -0.24
GPC1-209ENST00000495100 MARCH4Q9P2E8 410 aaPredicted RBP13.54□□□□□ -0.24
GPC1-209ENST00000495100 RNF112Q9ULX5 631 aa13.54□□□□□ -0.24
GPC1-209ENST00000495100 CCDC189A1A4V9 331 aa13.54□□□□□ -0.24
GPC1-209ENST00000495100 H0Y626 953 aa13.54□□□□□ -0.24
GPC1-209ENST00000495100 BTN3A1O00481 513 aa13.54□□□□□ -0.24
GPC1-209ENST00000495100 DPYSL4O14531 572 aa13.54□□□□□ -0.24
GPC1-209ENST00000495100 TRIM16O95361 564 aa13.54□□□□□ -0.24
GPC1-209ENST00000495100 F9P00740 461 aa13.54□□□□□ -0.24
GPC1-209ENST00000495100 ENDOVQ8N8Q3 282 aaKnown RBP13.54□□□□□ -0.24
GPC1-209ENST00000495100 ANKRD49Q8WVL7 239 aa13.54□□□□□ -0.24
GPC1-209ENST00000495100 CNGB3Q9NQW8 809 aa13.54□□□□□ -0.24
GPC1-209ENST00000495100 IRAK4Q9NWZ3 460 aa13.54□□□□□ -0.24
GPC1-209ENST00000495100 MID2Q9UJV3 735 aa13.54□□□□□ -0.24
GPC1-209ENST00000495100 E9PAM4 449 aa13.53□□□□□ -0.24
GPC1-209ENST00000495100 SNNO75324 88 aaPredicted RBP13.53□□□□□ -0.24
GPC1-209ENST00000495100 SLC35E2BP0CK96 405 aa13.53□□□□□ -0.24
GPC1-209ENST00000495100 CRYBB1P53674 252 aaPredicted RBP13.53□□□□□ -0.24
GPC1-209ENST00000495100 GEMP55040 296 aa13.53□□□□□ -0.24
GPC1-209ENST00000495100 MRPS6P82932 125 aaKnown RBP13.53□□□□□ -0.24
GPC1-209ENST00000495100 NEDD8Q15843 81 aa13.53□□□□□ -0.24
GPC1-209ENST00000495100 SLC5A9Q2M3M2 681 aa13.53□□□□□ -0.24
GPC1-209ENST00000495100 FRA10AC1Q70Z53 315 aa13.53□□□□□ -0.24
GPC1-209ENST00000495100 GRIN3AQ8TCU5 1115 aa13.53□□□□□ -0.24
GPC1-209ENST00000495100 RSPH1Q8WYR4 309 aa13.53□□□□□ -0.24
GPC1-209ENST00000495100 GFM2Q969S9 779 aaKnown RBP13.53□□□□□ -0.24
GPC1-209ENST00000495100 SH3GL3Q99963 347 aa13.53□□□□□ -0.24
GPC1-209ENST00000495100 WARS2Q9UGM6 360 aaKnown RBP13.53□□□□□ -0.24
GPC1-209ENST00000495100 ZNHIT2Q9UHR6 403 aa13.53□□□□□ -0.24
GPC1-209ENST00000495100 COL11A1P12107 1806 aaPredicted RBP13.53□□□□□ -0.24
GPC1-209ENST00000495100 RAMP2O60895 175 aa13.53□□□□□ -0.24
GPC1-209ENST00000495100 MPOP05164 745 aa13.53□□□□□ -0.24
GPC1-209ENST00000495100 HGFP14210 728 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms