RNA–Protein interactions for RNA: ENST00000495016.5

CDK11A-221, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 286 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-221ENST00000495016 EDEM3Q9BZQ6 932 aa11.76□□□□□ -0.53
CDK11A-221ENST00000495016 SLC13A1Q9BZW2 595 aa11.76□□□□□ -0.53
CDK11A-221ENST00000495016 SLC39A8Q9C0K1 460 aa11.76□□□□□ -0.53
CDK11A-221ENST00000495016 PDFQ9HBH1 243 aa11.76□□□□□ -0.53
CDK11A-221ENST00000495016 PCDH12Q9NPG4 1184 aa11.76□□□□□ -0.53
CDK11A-221ENST00000495016 MBNL1Q9NR56 388 aaKnown RBP11.76□□□□□ -0.53
CDK11A-221ENST00000495016 U3KQA8 63 aa11.76□□□□□ -0.53
CDK11A-221ENST00000495016 LAMA5O15230 3695 aa11.75□□□□□ -0.53
CDK11A-221ENST00000495016 TSPAN11A1L157 253 aa11.75□□□□□ -0.53
CDK11A-221ENST00000495016 CPED1A4D0V7 1026 aa11.75□□□□□ -0.53
CDK11A-221ENST00000495016 EME2A4GXA9 379 aaPredicted RBP11.75□□□□□ -0.53
CDK11A-221ENST00000495016 LMO7DNF2Z398 122 aa11.75□□□□□ -0.53
CDK11A-221ENST00000495016 ATMINO43313 823 aaPredicted RBP11.75□□□□□ -0.53
CDK11A-221ENST00000495016 TLX3O43711 291 aaPredicted RBP11.75□□□□□ -0.53
CDK11A-221ENST00000495016 BRINP1O60477 761 aa11.75□□□□□ -0.53
CDK11A-221ENST00000495016 GCATO75600 419 aa11.75□□□□□ -0.53
CDK11A-221ENST00000495016 PIGNO95427 931 aa11.75□□□□□ -0.53
CDK11A-221ENST00000495016 ANXA6P08133 673 aa11.75□□□□□ -0.53
CDK11A-221ENST00000495016 ERCC2P18074 760 aa11.75□□□□□ -0.53
CDK11A-221ENST00000495016 MIPP30301 263 aa11.75□□□□□ -0.53
CDK11A-221ENST00000495016 IGFALSP35858 605 aa11.75□□□□□ -0.53
CDK11A-221ENST00000495016 PRKCIP41743 596 aa11.75□□□□□ -0.53
CDK11A-221ENST00000495016 HCAR3P49019 387 aa11.75□□□□□ -0.53
CDK11A-221ENST00000495016 BLKP51451 505 aa11.75□□□□□ -0.53
CDK11A-221ENST00000495016 ZNF135P52742 658 aaPredicted RBP11.75□□□□□ -0.53
CDK11A-221ENST00000495016 ADKP55263 362 aaKnown RBP11.75□□□□□ -0.53
CDK11A-221ENST00000495016 NSUN2Q08J23 767 aaKnown RBP eCLIP11.75□□□□□ -0.53
CDK11A-221ENST00000495016 RFTN1Q14699 578 aaPredicted RBP11.75□□□□□ -0.53
CDK11A-221ENST00000495016 NR0B2Q15466 257 aa11.75□□□□□ -0.53
CDK11A-221ENST00000495016 CDKN3Q16667 212 aa11.75□□□□□ -0.53
CDK11A-221ENST00000495016 CA9Q16790 459 aa11.75□□□□□ -0.53
CDK11A-221ENST00000495016 WSCD2Q2TBF2 565 aa11.75□□□□□ -0.53
CDK11A-221ENST00000495016 AFMIDQ63HM1 303 aa11.75□□□□□ -0.53
CDK11A-221ENST00000495016 MACC1Q6ZN28 852 aa11.75□□□□□ -0.53
CDK11A-221ENST00000495016 SRLQ86TD4 932 aa11.75□□□□□ -0.53
CDK11A-221ENST00000495016 CAMK1DQ8IU85 385 aa11.75□□□□□ -0.53
CDK11A-221ENST00000495016 PHACTR4Q8IZ21 702 aa11.75□□□□□ -0.53
CDK11A-221ENST00000495016 LSMEM2Q8N112 164 aa11.75□□□□□ -0.53
CDK11A-221ENST00000495016 TP53I13Q8NBR0 393 aaPredicted RBP11.75□□□□□ -0.53
CDK11A-221ENST00000495016 TSEN2Q8NCE0 465 aaKnown RBP11.75□□□□□ -0.53
CDK11A-221ENST00000495016 TPCN2Q8NHX9 752 aa11.75□□□□□ -0.53
CDK11A-221ENST00000495016 SNIP1Q8TAD8 396 aaKnown RBP11.75□□□□□ -0.53
CDK11A-221ENST00000495016 IFI44Q8TCB0 444 aa11.75□□□□□ -0.53
CDK11A-221ENST00000495016 TRIM11Q96F44 468 aa11.75□□□□□ -0.53
CDK11A-221ENST00000495016 NAP1L5Q96NT1 182 aaPredicted RBP11.75□□□□□ -0.53
CDK11A-221ENST00000495016 SNRNP25Q9BV90 132 aaKnown RBP11.75□□□□□ -0.53
CDK11A-221ENST00000495016 ATP13A3Q9H7F0 1226 aa11.75□□□□□ -0.53
CDK11A-221ENST00000495016 MRPL47Q9HD33 250 aaKnown RBP11.75□□□□□ -0.53
CDK11A-221ENST00000495016 CNOT8Q9UFF9 292 aaKnown RBP11.75□□□□□ -0.53
CDK11A-221ENST00000495016 APOBEC3BQ9UH17 382 aaKnown RBP11.75□□□□□ -0.53
CDK11A-221ENST00000495016 SCINQ9Y6U3 715 aa11.75□□□□□ -0.53
CDK11A-221ENST00000495016 A0A1B0GTH6 734 aa11.74□□□□□ -0.53
CDK11A-221ENST00000495016 DDX3XO00571 662 aaKnown RBP eCLIP11.74□□□□□ -0.53
CDK11A-221ENST00000495016 YY2O15391 372 aa11.74□□□□□ -0.53
CDK11A-221ENST00000495016 LZTS3O60299 673 aaPredicted RBP11.74□□□□□ -0.53
CDK11A-221ENST00000495016 USP12O75317 370 aa11.74□□□□□ -0.53
CDK11A-221ENST00000495016 SERPINC1P01008 464 aa11.74□□□□□ -0.53
CDK11A-221ENST00000495016 MYBL1P10243 752 aa11.74□□□□□ -0.53
CDK11A-221ENST00000495016 ITPKBP27987 946 aa11.74□□□□□ -0.53
CDK11A-221ENST00000495016 HTR1BP28222 390 aa11.74□□□□□ -0.53
CDK11A-221ENST00000495016 SERPINA4P29622 427 aa11.74□□□□□ -0.53
CDK11A-221ENST00000495016 PCK1P35558 622 aa11.74□□□□□ -0.53
CDK11A-221ENST00000495016 LIG3P49916 1009 aa11.74□□□□□ -0.53
CDK11A-221ENST00000495016 POLR2LP62875 67 aaKnown RBP11.74□□□□□ -0.53
CDK11A-221ENST00000495016 C1orf61Q13536 156 aa11.74□□□□□ -0.53
CDK11A-221ENST00000495016 COL9A2Q14055 689 aaPredicted RBP11.74□□□□□ -0.53
CDK11A-221ENST00000495016 NR1I3Q14994 352 aa11.74□□□□□ -0.53
CDK11A-221ENST00000495016 ACAP1Q15027 740 aa11.74□□□□□ -0.53
CDK11A-221ENST00000495016 TBC1D25Q3MII6 688 aa11.74□□□□□ -0.53
CDK11A-221ENST00000495016 SOWAHCQ53LP3 525 aaPredicted RBP11.74□□□□□ -0.53
CDK11A-221ENST00000495016 BOLA3Q53S33 107 aa11.74□□□□□ -0.53
CDK11A-221ENST00000495016 PPP6R3Q5H9R7 873 aaPredicted RBP11.74□□□□□ -0.53
CDK11A-221ENST00000495016 GUSBP11Q6P575 273 aa11.74□□□□□ -0.53
CDK11A-221ENST00000495016 EFL1Q7Z2Z2 1120 aaKnown RBP11.74□□□□□ -0.53
CDK11A-221ENST00000495016 RBFAQ8N0V3 343 aa11.74□□□□□ -0.53
CDK11A-221ENST00000495016 LZTR1Q8N653 840 aa11.74□□□□□ -0.53
CDK11A-221ENST00000495016 SCG3Q8WXD2 468 aaKnown RBP11.74□□□□□ -0.53
CDK11A-221ENST00000495016 GRAMD1AQ96CP6 724 aa11.74□□□□□ -0.53
CDK11A-221ENST00000495016 PEBP4Q96S96 227 aa11.74□□□□□ -0.53
CDK11A-221ENST00000495016 KCTD15Q96SI1 283 aaPredicted RBP11.74□□□□□ -0.53
CDK11A-221ENST00000495016 BOCQ9BWV1 1114 aa11.74□□□□□ -0.53
CDK11A-221ENST00000495016 TRIM7Q9C029 511 aa11.74□□□□□ -0.53
CDK11A-221ENST00000495016 TCEAL2Q9H3H9 227 aaPredicted RBP11.74□□□□□ -0.53
CDK11A-221ENST00000495016 ZWILCHQ9H900 591 aa11.74□□□□□ -0.53
CDK11A-221ENST00000495016 ATP8A1Q9Y2Q0 1164 aa11.74□□□□□ -0.53
CDK11A-221ENST00000495016 PCDHB1Q9Y5F3 818 aa11.74□□□□□ -0.53
CDK11A-221ENST00000495016 COL5A1P20908 1838 aaPredicted RBP11.74□□□□□ -0.53
CDK11A-221ENST00000495016 PLXNB3Q9ULL4 1909 aa11.74□□□□□ -0.53
CDK11A-221ENST00000495016 CFAP69A5D8W1 941 aa11.73□□□□□ -0.53
CDK11A-221ENST00000495016 DFFAO00273 331 aa11.73□□□□□ -0.53
CDK11A-221ENST00000495016 MUSKO15146 869 aa11.73□□□□□ -0.53
CDK11A-221ENST00000495016 CSO75390 466 aaKnown RBP11.73□□□□□ -0.53
CDK11A-221ENST00000495016 MPOP05164 745 aa11.73□□□□□ -0.53
CDK11A-221ENST00000495016 ALPIP09923 528 aa11.73□□□□□ -0.53
CDK11A-221ENST00000495016 SKILP12757 684 aa11.73□□□□□ -0.53
CDK11A-221ENST00000495016 C6P13671 934 aa11.73□□□□□ -0.53
CDK11A-221ENST00000495016 TSHRP16473 764 aa11.73□□□□□ -0.53
CDK11A-221ENST00000495016 TGM2P21980 687 aa11.73□□□□□ -0.53
CDK11A-221ENST00000495016 RGRP47804 291 aa11.73□□□□□ -0.53
CDK11A-221ENST00000495016 LSSP48449 732 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms