RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 HAUS3Q68CZ6 603 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 C8orf82Q6P1X6 216 aaPredicted RBP2.5□□□□□ -2.01
LMNB1-207ENST00000494185 CCDC129Q6ZRS4 1044 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 SLC16A12Q6ZSM3 486 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 MON1BQ7L1V2 547 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 KRT74Q7RTS7 529 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 GSTA5Q7RTV2 222 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 ANKRD23Q86SG2 305 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 SAMD14Q8IZD0 417 aaPredicted RBP2.5□□□□□ -2.01
LMNB1-207ENST00000494185 GPATCH11Q8N954 259 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 C11orf65Q8NCR3 313 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 NFKBIDQ8NI38 313 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 ZCCHC10Q8TBK6 192 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 ELP5Q8TE02 316 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 FAM216AQ8WUB2 273 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 EYA3Q99504 573 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 SDF4Q9BRK5 362 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.5□□□□□ -2.01
LMNB1-207ENST00000494185 PHF7Q9BWX1 381 aaPredicted RBP2.5□□□□□ -2.01
LMNB1-207ENST00000494185 INTS2Q9H0H0 1204 aaKnown RBP2.5□□□□□ -2.01
LMNB1-207ENST00000494185 CDT1Q9H211 546 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 GHITMQ9H3K2 345 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 KLHL31Q9H511 634 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 CXorf56Q9H5V9 222 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 MAP6D1Q9H9H5 199 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 PLAC1Q9HBJ0 212 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 VEZTQ9HBM0 779 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 PLSCR4Q9NRQ2 329 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 KRT84Q9NSB2 600 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 ATP8A2Q9NTI2 1148 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 ZBTB40Q9NUA8 1239 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 SPATS2LQ9NUQ6 558 aaKnown RBP2.5□□□□□ -2.01
LMNB1-207ENST00000494185 PPP1R14DQ9NXH3 145 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 VPS28Q9UK41 221 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 NOL7Q9UMY1 257 aaKnown RBP2.5□□□□□ -2.01
LMNB1-207ENST00000494185 CLDN16Q9Y5I7 305 aa2.5□□□□□ -2.01
LMNB1-207ENST00000494185 C17orf113A0A1B0GUU1 675 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 KDM4EB2RXH2 506 aaPredicted RBP2.49□□□□□ -2.01
LMNB1-207ENST00000494185 B4DLN1 442 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 CEP104O60308 925 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 DOK2O60496 412 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 PTP4A3O75365 173 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 TIPRLO75663 272 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 GLUD1P00367 558 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 HSPA1AP0DMV8 641 aaKnown RBP2.49□□□□□ -2.01
LMNB1-207ENST00000494185 HSPA1BP0DMV9 641 aaKnown RBP2.49□□□□□ -2.01
LMNB1-207ENST00000494185 TFPIP10646 304 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 VDRP11473 427 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 LAMP2P13473 410 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 NAGAP17050 411 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 GPTP24298 496 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 C21orf33P30042 268 aaPredicted RBP2.49□□□□□ -2.01
LMNB1-207ENST00000494185 GLUD2P49448 558 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 ARSFP54793 590 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 CDH15P55291 814 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 TMPRSS3P57727 454 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 RPP30P78346 268 aaKnown RBP2.49□□□□□ -2.01
LMNB1-207ENST00000494185 GALNT2Q10471 571 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 PTP4A2Q12974 167 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 ITGADQ13349 1161 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 CUL4AQ13619 759 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 ACVR2BQ13705 512 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 CAMK1Q14012 370 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 VEPH1Q14D04 833 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 ME3Q16798 604 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 LEXMQ3ZCV2 418 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 PLEKHO1Q53GL0 409 aaPredicted RBP2.49□□□□□ -2.01
LMNB1-207ENST00000494185 FNBP1LQ5T0N5 605 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 ASPHD1Q5U4P2 390 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 SNX30Q5VWJ9 437 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 TBC1D9BQ66K14 1250 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 ATG9BQ674R7 924 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 NUGGCQ68CJ6 796 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 NAPEPLDQ6IQ20 393 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 SLC22A25Q6T423 547 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 H1FNTQ75WM6 255 aaPredicted RBP2.49□□□□□ -2.01
LMNB1-207ENST00000494185 R3HCC1LQ7Z5L2 792 aaKnown RBP2.49□□□□□ -2.01
LMNB1-207ENST00000494185 MON1AQ86VX9 555 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 CHD1LQ86WJ1 897 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 GPSM1Q86YR5 675 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 DENND6AQ8IWF6 608 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 CCDC105Q8IYK2 499 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 ADSSL1Q8N142 457 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 CPXM2Q8N436 756 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 KDM1BQ8NB78 822 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 KCNH5Q8NCM2 988 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 CEP76Q8TAP6 659 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 TMEM170AQ8WVE7 144 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 RUFY2Q8WXA3 655 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 MED30Q96HR3 178 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 OR1F2PQ96R84 312 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 WDR77Q9BQA1 342 aaPredicted RBP2.49□□□□□ -2.01
LMNB1-207ENST00000494185 CLSTN3Q9BQT9 956 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 ZPBPQ9BS86 351 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 VPS33BQ9H267 617 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 PDCL3Q9H2J4 239 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 RANBP17Q9H2T7 1088 aaKnown RBP2.49□□□□□ -2.01
LMNB1-207ENST00000494185 HIPK2Q9H2X6 1198 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 MUC13Q9H3R2 512 aa2.49□□□□□ -2.01
LMNB1-207ENST00000494185 BEX4Q9NWD9 120 aaPredicted RBP2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms