RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 AGMOQ6ZNB7 445 aa19.27■□□□□ 0.68
COL27A1-207ENST00000494090 DNAJC1Q96KC8 554 aaKnown RBP19.27■□□□□ 0.68
COL27A1-207ENST00000494090 RNF19AQ9NV58 838 aa19.27■□□□□ 0.68
COL27A1-207ENST00000494090 PCDHAC2Q9Y5I4 1007 aa19.27■□□□□ 0.68
COL27A1-207ENST00000494090 AVILO75366 819 aa19.27■□□□□ 0.68
COL27A1-207ENST00000494090 GPR1P46091 355 aa19.27■□□□□ 0.68
COL27A1-207ENST00000494090 BNIP2Q12982 314 aa19.27■□□□□ 0.68
COL27A1-207ENST00000494090 BIKQ13323 160 aa19.27■□□□□ 0.68
COL27A1-207ENST00000494090 NOMO1Q15155 1222 aa19.27■□□□□ 0.68
COL27A1-207ENST00000494090 ADAMTSL2Q86TH1 951 aa19.27■□□□□ 0.68
COL27A1-207ENST00000494090 ALYREFQ86V81 257 aaKnown RBP19.27■□□□□ 0.68
COL27A1-207ENST00000494090 C10orf107Q8IVU9 208 aa19.27■□□□□ 0.68
COL27A1-207ENST00000494090 CXorf40BQ96DE9 158 aa19.27■□□□□ 0.68
COL27A1-207ENST00000494090 RPS6KA6Q9UK32 745 aa19.27■□□□□ 0.68
COL27A1-207ENST00000494090 AMD1P17707 334 aa19.27■□□□□ 0.68
COL27A1-207ENST00000494090 CLK3P49761 638 aaKnown RBP19.27■□□□□ 0.68
COL27A1-207ENST00000494090 ALG11Q2TAA5 492 aa19.27■□□□□ 0.68
COL27A1-207ENST00000494090 BRMS1LQ5PSV4 323 aa19.27■□□□□ 0.68
COL27A1-207ENST00000494090 CROCCP3Q8IVE0 287 aa19.27■□□□□ 0.68
COL27A1-207ENST00000494090 TSPAN14Q8NG11 270 aa19.27■□□□□ 0.68
COL27A1-207ENST00000494090 JOSD2Q8TAC2 188 aa19.27■□□□□ 0.68
COL27A1-207ENST00000494090 HEXDCQ8WVB3 486 aa19.27■□□□□ 0.68
COL27A1-207ENST00000494090 MYLPFQ96A32 169 aa19.27■□□□□ 0.68
COL27A1-207ENST00000494090 CDH19Q9H159 772 aa19.27■□□□□ 0.68
COL27A1-207ENST00000494090 CNGB3Q9NQW8 809 aa19.27■□□□□ 0.68
COL27A1-207ENST00000494090 H0YC42 278 aa19.27■□□□□ 0.67
COL27A1-207ENST00000494090 HTR1BP28222 390 aa19.27■□□□□ 0.67
COL27A1-207ENST00000494090 SMIM11AP58511 58 aa19.27■□□□□ 0.67
COL27A1-207ENST00000494090 DGKKQ5KSL6 1271 aa19.27■□□□□ 0.67
COL27A1-207ENST00000494090 RSBN1Q5VWQ0 802 aaPredicted RBP19.27■□□□□ 0.67
COL27A1-207ENST00000494090 NEK5Q6P3R8 708 aa19.27■□□□□ 0.67
COL27A1-207ENST00000494090 GPR142Q7Z601 462 aa19.27■□□□□ 0.67
COL27A1-207ENST00000494090 MAGEE2Q8TD90 523 aaPredicted RBP19.27■□□□□ 0.67
COL27A1-207ENST00000494090 CYLDQ9NQC7 956 aa19.27■□□□□ 0.67
COL27A1-207ENST00000494090 FZD1Q9UP38 647 aa19.27■□□□□ 0.67
COL27A1-207ENST00000494090 B4GALT5O43286 388 aa19.27■□□□□ 0.67
COL27A1-207ENST00000494090 PEX11AO75192 247 aa19.27■□□□□ 0.67
COL27A1-207ENST00000494090 CLK2P49760 499 aaKnown RBP19.27■□□□□ 0.67
COL27A1-207ENST00000494090 JAM2P57087 298 aa19.27■□□□□ 0.67
COL27A1-207ENST00000494090 ATP6V0D1P61421 351 aa19.27■□□□□ 0.67
COL27A1-207ENST00000494090 TRAF3Q13114 568 aa19.27■□□□□ 0.67
COL27A1-207ENST00000494090 NOGQ13253 232 aa19.27■□□□□ 0.67
COL27A1-207ENST00000494090 TRIM25Q14258 630 aaKnown RBP19.27■□□□□ 0.67
COL27A1-207ENST00000494090 PPP1R26Q5T8A7 1209 aaPredicted RBP19.27■□□□□ 0.67
COL27A1-207ENST00000494090 SERPINA13PQ6UXR4 307 aa19.27■□□□□ 0.67
COL27A1-207ENST00000494090 GATAD2AQ86YP4 633 aa19.27■□□□□ 0.67
COL27A1-207ENST00000494090 FAM20CQ8IXL6 584 aa19.27■□□□□ 0.67
COL27A1-207ENST00000494090 SLC17A7Q9P2U7 560 aa19.27■□□□□ 0.67
COL27A1-207ENST00000494090 LRRC14BA6NHZ5 514 aa19.26■□□□□ 0.67
COL27A1-207ENST00000494090 GCATO75600 419 aa19.26■□□□□ 0.67
COL27A1-207ENST00000494090 PIAS1O75925 651 aa19.26■□□□□ 0.67
COL27A1-207ENST00000494090 BPGMP07738 259 aa19.26■□□□□ 0.67
COL27A1-207ENST00000494090 DCTN2Q13561 401 aaKnown RBP19.26■□□□□ 0.67
COL27A1-207ENST00000494090 EEF1DP3Q658K8 133 aa19.26■□□□□ 0.67
COL27A1-207ENST00000494090 C1orf50Q9BV19 199 aa19.26■□□□□ 0.67
COL27A1-207ENST00000494090 SPRTNQ9H040 489 aaPredicted RBP19.26■□□□□ 0.67
COL27A1-207ENST00000494090 SLC28A1O00337 649 aa19.26■□□□□ 0.67
COL27A1-207ENST00000494090 IRF6O14896 467 aa19.26■□□□□ 0.67
COL27A1-207ENST00000494090 CTNNB1P35222 781 aa19.26■□□□□ 0.67
COL27A1-207ENST00000494090 GRM3Q14832 879 aa19.26■□□□□ 0.67
COL27A1-207ENST00000494090 TSHZ1Q6ZSZ6 1077 aa19.26■□□□□ 0.67
COL27A1-207ENST00000494090 FBXO30Q8TB52 745 aa19.26■□□□□ 0.67
COL27A1-207ENST00000494090 PIK3R5Q8WYR1 880 aa19.26■□□□□ 0.67
COL27A1-207ENST00000494090 DUSP16Q9BY84 665 aa19.26■□□□□ 0.67
COL27A1-207ENST00000494090 NID2Q14112 1375 aa19.26■□□□□ 0.67
COL27A1-207ENST00000494090 NR1H2P55055 460 aa19.26■□□□□ 0.67
COL27A1-207ENST00000494090 RGL4Q8IZJ4 473 aa19.26■□□□□ 0.67
COL27A1-207ENST00000494090 SLC44A1Q8WWI5 657 aa19.26■□□□□ 0.67
COL27A1-207ENST00000494090 CENPIQ92674 756 aaPredicted RBP19.26■□□□□ 0.67
COL27A1-207ENST00000494090 ATP6V1HQ9UI12 483 aa19.26■□□□□ 0.67
COL27A1-207ENST00000494090 YDJCA8MPS7 323 aa19.26■□□□□ 0.67
COL27A1-207ENST00000494090 TRAFD1O14545 582 aaPredicted RBP19.26■□□□□ 0.67
COL27A1-207ENST00000494090 CDC25CP30307 473 aa19.26■□□□□ 0.67
COL27A1-207ENST00000494090 GSTT1P30711 240 aa19.26■□□□□ 0.67
COL27A1-207ENST00000494090 ADARP55265 1226 aaKnown RBP19.26■□□□□ 0.67
COL27A1-207ENST00000494090 HSPA14Q0VDF9 509 aa19.26■□□□□ 0.67
COL27A1-207ENST00000494090 PDZK1Q5T2W1 519 aa19.26■□□□□ 0.67
COL27A1-207ENST00000494090 POTEHQ6S545 545 aa19.26■□□□□ 0.67
COL27A1-207ENST00000494090 MARK2Q7KZI7 788 aaKnown RBP19.26■□□□□ 0.67
COL27A1-207ENST00000494090 LRRC57Q8N9N7 239 aa19.26■□□□□ 0.67
COL27A1-207ENST00000494090 FNIP1Q8TF40 1166 aa19.26■□□□□ 0.67
COL27A1-207ENST00000494090 SPACA7Q96KW9 195 aa19.26■□□□□ 0.67
COL27A1-207ENST00000494090 HDHD2Q9H0R4 259 aa19.26■□□□□ 0.67
COL27A1-207ENST00000494090 XIAPP98170 497 aa19.25■□□□□ 0.67
COL27A1-207ENST00000494090 COMMD2Q86X83 199 aa19.25■□□□□ 0.67
COL27A1-207ENST00000494090 C12orf29Q8N999 325 aa19.25■□□□□ 0.67
COL27A1-207ENST00000494090 NDNQ99608 321 aa19.25■□□□□ 0.67
COL27A1-207ENST00000494090 XPR1Q9UBH6 696 aa19.25■□□□□ 0.67
COL27A1-207ENST00000494090 PIPSLA2A3N6 862 aa19.25■□□□□ 0.67
COL27A1-207ENST00000494090 B4GALT4O60513 344 aa19.25■□□□□ 0.67
COL27A1-207ENST00000494090 TBL1XO60907 577 aa19.25■□□□□ 0.67
COL27A1-207ENST00000494090 FKTNO75072 461 aa19.25■□□□□ 0.67
COL27A1-207ENST00000494090 TSPAN19P0C672 248 aa19.25■□□□□ 0.67
COL27A1-207ENST00000494090 RPL5P46777 297 aaKnown RBP19.25■□□□□ 0.67
COL27A1-207ENST00000494090 RAET1GQ6H3X3 334 aa19.25■□□□□ 0.67
COL27A1-207ENST00000494090 RGMBQ6NW40 437 aa19.25■□□□□ 0.67
COL27A1-207ENST00000494090 ABHD15Q6UXT9 468 aa19.25■□□□□ 0.67
COL27A1-207ENST00000494090 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.25■□□□□ 0.672e-6■■■□□ 15.5
COL27A1-207ENST00000494090 GRIN3AQ8TCU5 1115 aa19.25■□□□□ 0.67
COL27A1-207ENST00000494090 TEKT5Q96M29 485 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms