RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 RING1Q06587 406 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 ITKQ08881 620 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 CIR1Q86X95 450 aaPredicted RBP13.91□□□□□ -0.18
VCP-207ENST00000493886 CNTN4Q8IWV2 1026 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 TNS4Q8IZW8 715 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 PYDC1Q8WXC3 89 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 MOCOSQ96EN8 888 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 IMP4Q96G21 291 aaKnown RBP13.91□□□□□ -0.18
VCP-207ENST00000493886 CCDC106Q9BWC9 280 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 ZNF212Q9UDV6 495 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 SLC2A6Q9UGQ3 507 aa13.91□□□□□ -0.18
VCP-207ENST00000493886 LOC100653049A0A140TA62 436 aa13.9□□□□□ -0.18
VCP-207ENST00000493886 SLC38A8A6NNN8 435 aa13.9□□□□□ -0.18
VCP-207ENST00000493886 KRT34O76011 436 aa13.9□□□□□ -0.18
VCP-207ENST00000493886 AHSGP02765 367 aa13.9□□□□□ -0.18
VCP-207ENST00000493886 RALBP11234 206 aa13.9□□□□□ -0.18
VCP-207ENST00000493886 ATF6P18850 670 aa13.9□□□□□ -0.18
VCP-207ENST00000493886 ARNTP27540 789 aa13.9□□□□□ -0.18
VCP-207ENST00000493886 GABRB3P28472 473 aa13.9□□□□□ -0.18
VCP-207ENST00000493886 MYBPC3Q14896 1274 aa13.9□□□□□ -0.18
VCP-207ENST00000493886 PIWIL2Q8TC59 973 aaKnown RBP13.9□□□□□ -0.18
VCP-207ENST00000493886 PPP1R36Q96LQ0 422 aa13.9□□□□□ -0.18
VCP-207ENST00000493886 OXCT2Q9BYC2 517 aaPredicted RBP13.9□□□□□ -0.18
VCP-207ENST00000493886 PACSIN3Q9UKS6 424 aa13.9□□□□□ -0.18
VCP-207ENST00000493886 PLA2G4CQ9UP65 541 aa13.9□□□□□ -0.18
VCP-207ENST00000493886 ADAM12O43184 909 aa13.9□□□□□ -0.18
VCP-207ENST00000493886 ARRB2P32121 409 aa13.9□□□□□ -0.18
VCP-207ENST00000493886 PGGT1BP53609 377 aa13.9□□□□□ -0.18
VCP-207ENST00000493886 CCL23P55773 120 aa13.9□□□□□ -0.18
VCP-207ENST00000493886 ITGA9Q13797 1035 aa13.9□□□□□ -0.18
VCP-207ENST00000493886 SEPT6Q14141 434 aa13.9□□□□□ -0.18
VCP-207ENST00000493886 CNGA3Q16281 694 aa13.9□□□□□ -0.18
VCP-207ENST00000493886 UGP2Q16851 508 aa13.9□□□□□ -0.18
VCP-207ENST00000493886 FAM91A1Q658Y4 838 aa13.9□□□□□ -0.18
VCP-207ENST00000493886 WDR75Q8IWA0 830 aaKnown RBP13.9□□□□□ -0.18
VCP-207ENST00000493886 DENND6AQ8IWF6 608 aa13.9□□□□□ -0.18
VCP-207ENST00000493886 LRRC43Q8N309 656 aa13.9□□□□□ -0.18
VCP-207ENST00000493886 FBXO22Q8NEZ5 403 aa13.9□□□□□ -0.18
VCP-207ENST00000493886 ZNF184Q99676 751 aaPredicted RBP13.9□□□□□ -0.18
VCP-207ENST00000493886 UBE2OQ9C0C9 1292 aaKnown RBP13.9□□□□□ -0.18
VCP-207ENST00000493886 TREX1Q9NSU2 369 aa13.9□□□□□ -0.18
VCP-207ENST00000493886 TRIM17Q9Y577 477 aa13.9□□□□□ -0.18
VCP-207ENST00000493886 RAMP2O60895 175 aa13.89□□□□□ -0.19
VCP-207ENST00000493886 TM7SF2O76062 418 aa13.89□□□□□ -0.19
VCP-207ENST00000493886 ANPEPP15144 967 aa13.89□□□□□ -0.19
VCP-207ENST00000493886 PAMP19021 973 aa13.89□□□□□ -0.19
VCP-207ENST00000493886 CD86P42081 329 aa13.89□□□□□ -0.19
VCP-207ENST00000493886 CSRP3P50461 194 aa13.89□□□□□ -0.19
VCP-207ENST00000493886 MPP1Q00013 466 aa13.89□□□□□ -0.19
VCP-207ENST00000493886 CTBP1Q13363 440 aa13.89□□□□□ -0.19
VCP-207ENST00000493886 USP10Q14694 798 aaKnown RBP13.89□□□□□ -0.19
VCP-207ENST00000493886 POLD3Q15054 466 aaPredicted RBP13.89□□□□□ -0.19
VCP-207ENST00000493886 NADSYN1Q6IA69 706 aa13.89□□□□□ -0.19
VCP-207ENST00000493886 RAPH1Q70E73 1250 aa13.89□□□□□ -0.19
VCP-207ENST00000493886 TEX26Q8N6G2 289 aa13.89□□□□□ -0.19
VCP-207ENST00000493886 ARNT2Q9HBZ2 717 aa13.89□□□□□ -0.19
VCP-207ENST00000493886 MAN1C1Q9NR34 630 aa13.89□□□□□ -0.19
VCP-207ENST00000493886 VPS45Q9NRW7 570 aa13.89□□□□□ -0.19
VCP-207ENST00000493886 FBXO9Q9UK97 447 aaPredicted RBP13.89□□□□□ -0.19
VCP-207ENST00000493886 NCF2P19878 526 aaPredicted RBP13.89□□□□□ -0.19
VCP-207ENST00000493886 SAT1P21673 171 aa13.89□□□□□ -0.19
VCP-207ENST00000493886 TRPC1P48995 793 aa13.89□□□□□ -0.19
VCP-207ENST00000493886 VEGFBP49765 207 aa13.89□□□□□ -0.19
VCP-207ENST00000493886 DSC2Q02487 901 aa13.89□□□□□ -0.19
VCP-207ENST00000493886 SMUG1Q53HV7 270 aa13.89□□□□□ -0.19
VCP-207ENST00000493886 C6orf163Q5TEZ5 329 aa13.89□□□□□ -0.19
VCP-207ENST00000493886 KIAA0930Q6ICG6 404 aaPredicted RBP13.89□□□□□ -0.19
VCP-207ENST00000493886 IRGCQ6NXR0 463 aa13.89□□□□□ -0.19
VCP-207ENST00000493886 CCDC80Q76M96 950 aa13.89□□□□□ -0.19
VCP-207ENST00000493886 PPP4R1Q8TF05 950 aa13.89□□□□□ -0.19
VCP-207ENST00000493886 MYEOVQ96EZ4 313 aa13.89□□□□□ -0.19
VCP-207ENST00000493886 SORT1Q99523 831 aa13.89□□□□□ -0.19
VCP-207ENST00000493886 SIKE1Q9BRV8 207 aa13.89□□□□□ -0.19
VCP-207ENST00000493886 TTLL2Q9BWV7 592 aa13.89□□□□□ -0.19
VCP-207ENST00000493886 PRKD2Q9BZL6 878 aa13.89□□□□□ -0.19
VCP-207ENST00000493886 NMRAL1Q9HBL8 299 aa13.89□□□□□ -0.19
VCP-207ENST00000493886 ATP13A1Q9HD20 1204 aa13.89□□□□□ -0.19
VCP-207ENST00000493886 NDE1Q9NXR1 346 aa13.89□□□□□ -0.19
VCP-207ENST00000493886 SCOCQ9UIL1 159 aa13.89□□□□□ -0.19
VCP-207ENST00000493886 TLK1Q9UKI8 766 aa13.89□□□□□ -0.19
VCP-207ENST00000493886 MIA3Q5JRA6 1907 aa13.88□□□□□ -0.19
VCP-207ENST00000493886 G3V2L1 256 aa13.88□□□□□ -0.19
VCP-207ENST00000493886 OR1E1P30953 314 aa13.88□□□□□ -0.19
VCP-207ENST00000493886 KCNQ1P51787 676 aa13.88□□□□□ -0.19
VCP-207ENST00000493886 KPNA1P52294 538 aaPredicted RBP13.88□□□□□ -0.19
VCP-207ENST00000493886 RAP1GDS1P52306 607 aa13.88□□□□□ -0.19
VCP-207ENST00000493886 ABCE1P61221 599 aaKnown RBP13.88□□□□□ -0.19
VCP-207ENST00000493886 ROR2Q01974 943 aaKnown RBP13.88□□□□□ -0.19
VCP-207ENST00000493886 PARP15Q460N3 678 aa13.88□□□□□ -0.19
VCP-207ENST00000493886 MAVSQ7Z434 540 aa13.88□□□□□ -0.19
VCP-207ENST00000493886 OR6Y1Q8NGX8 325 aa13.88□□□□□ -0.19
VCP-207ENST00000493886 DEFB118Q96PH6 123 aa13.88□□□□□ -0.19
VCP-207ENST00000493886 TSC22D3Q99576 134 aa13.88□□□□□ -0.19
VCP-207ENST00000493886 HIPK3Q9H422 1215 aa13.88□□□□□ -0.19
VCP-207ENST00000493886 ANKRD6Q9Y2G4 727 aa13.88□□□□□ -0.19
VCP-207ENST00000493886 PHGDHO43175 533 aaKnown RBP13.88□□□□□ -0.19
VCP-207ENST00000493886 SIN3BO75182 1162 aa13.88□□□□□ -0.19
VCP-207ENST00000493886 CXCL10P02778 98 aa13.88□□□□□ -0.19
VCP-207ENST00000493886 SERPINA6P08185 405 aa13.88□□□□□ -0.19
VCP-207ENST00000493886 MMP2P08253 660 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms