RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 FEM1CQ96JP0 617 aa19.54■□□□□ 0.72
USP39-218ENST00000493829 FAM129BQ96TA1 746 aa19.54■□□□□ 0.72
USP39-218ENST00000493829 MYLKQ15746 1914 aa19.54■□□□□ 0.72
USP39-218ENST00000493829 UQCRHLA0A096LP55 91 aa19.53■□□□□ 0.72
USP39-218ENST00000493829 A0A1W2PQF6 199 aa19.53■□□□□ 0.72
USP39-218ENST00000493829 TRAFD1O14545 582 aaPredicted RBP19.53■□□□□ 0.72
USP39-218ENST00000493829 NDC80O14777 642 aa19.53■□□□□ 0.72
USP39-218ENST00000493829 CPP00450 1065 aa19.53■□□□□ 0.72
USP39-218ENST00000493829 PDGFBP01127 241 aaPredicted RBP19.53■□□□□ 0.72
USP39-218ENST00000493829 UQCRHP07919 91 aa19.53■□□□□ 0.72
USP39-218ENST00000493829 ATXN1LP0C7T5 689 aaKnown RBP19.53■□□□□ 0.72
USP39-218ENST00000493829 EPHB1P54762 984 aa19.53■□□□□ 0.72
USP39-218ENST00000493829 CAMK2GQ13555 558 aaPredicted RBP19.53■□□□□ 0.72
USP39-218ENST00000493829 PTPRRQ15256 657 aa19.53■□□□□ 0.72
USP39-218ENST00000493829 SLC1A5Q15758 541 aa19.53■□□□□ 0.72
USP39-218ENST00000493829 FNBP1LQ5T0N5 605 aa19.53■□□□□ 0.72
USP39-218ENST00000493829 ARMC12Q5T9G4 340 aa19.53■□□□□ 0.72
USP39-218ENST00000493829 TRIM67Q6ZTA4 783 aa19.53■□□□□ 0.72
USP39-218ENST00000493829 CAND1Q86VP6 1230 aaKnown RBP19.53■□□□□ 0.72
USP39-218ENST00000493829 PJA1Q8NG27 643 aa19.53■□□□□ 0.72
USP39-218ENST00000493829 PIP4K2CQ8TBX8 421 aa19.53■□□□□ 0.72
USP39-218ENST00000493829 TRIB3Q96RU7 358 aa19.53■□□□□ 0.72
USP39-218ENST00000493829 FMO2Q99518 471 aa19.53■□□□□ 0.72
USP39-218ENST00000493829 CPEB1Q9BZB8 566 aaKnown RBP19.53■□□□□ 0.72
USP39-218ENST00000493829 SUV39H2Q9H5I1 410 aa19.53■□□□□ 0.72
USP39-218ENST00000493829 MMP17Q9ULZ9 603 aa19.53■□□□□ 0.72
USP39-218ENST00000493829 PLK4O00444 970 aa19.52■□□□□ 0.72
USP39-218ENST00000493829 SOCS5O75159 536 aa19.52■□□□□ 0.72
USP39-218ENST00000493829 PGLSO95336 258 aa19.52■□□□□ 0.72
USP39-218ENST00000493829 PRLP01236 227 aa19.52■□□□□ 0.72
USP39-218ENST00000493829 SLC4A1P02730 911 aa19.52■□□□□ 0.72
USP39-218ENST00000493829 PRNPP04156 253 aa19.52■□□□□ 0.72
USP39-218ENST00000493829 CTPS1P17812 591 aa19.52■□□□□ 0.72
USP39-218ENST00000493829 CRADDP78560 199 aa19.52■□□□□ 0.72
USP39-218ENST00000493829 SARNPP82979 210 aaKnown RBP19.52■□□□□ 0.72
USP39-218ENST00000493829 SEMG2Q02383 582 aa19.52■□□□□ 0.72
USP39-218ENST00000493829 CAV1Q03135 178 aa19.52■□□□□ 0.72
USP39-218ENST00000493829 FZD5Q13467 585 aa19.52■□□□□ 0.72
USP39-218ENST00000493829 SLC14A2Q15849 920 aa19.52■□□□□ 0.72
USP39-218ENST00000493829 HIF1AQ16665 826 aa19.52■□□□□ 0.72
USP39-218ENST00000493829 EOGTQ5NDL2 527 aa19.52■□□□□ 0.72
USP39-218ENST00000493829 LINC00523Q86TU6 105 aa19.52■□□□□ 0.72
USP39-218ENST00000493829 ZCCHC9Q8N567 271 aaKnown RBP19.52■□□□□ 0.72
USP39-218ENST00000493829 RUBCNQ92622 972 aa19.52■□□□□ 0.72
USP39-218ENST00000493829 C2orf42Q9NWW7 574 aa19.52■□□□□ 0.72
USP39-218ENST00000493829 DCXO43602 365 aa19.52■□□□□ 0.71
USP39-218ENST00000493829 NDST3O95803 873 aa19.52■□□□□ 0.71
USP39-218ENST00000493829 DCNP07585 359 aaKnown RBP19.52■□□□□ 0.71
USP39-218ENST00000493829 FAM153BP0C7A2 387 aa19.52■□□□□ 0.71
USP39-218ENST00000493829 SLC8A1P32418 973 aa19.52■□□□□ 0.71
USP39-218ENST00000493829 CDK16Q00536 496 aa19.52■□□□□ 0.71
USP39-218ENST00000493829 SIGLEC14Q08ET2 396 aa19.52■□□□□ 0.71
USP39-218ENST00000493829 GAS6Q14393 721 aa19.52■□□□□ 0.71
USP39-218ENST00000493829 GRM3Q14832 879 aa19.52■□□□□ 0.71
USP39-218ENST00000493829 BBS9Q3SYG4 887 aa19.52■□□□□ 0.71
USP39-218ENST00000493829 FAM153CQ494X1 144 aa19.52■□□□□ 0.71
USP39-218ENST00000493829 MSS51Q4VC12 460 aa19.52■□□□□ 0.71
USP39-218ENST00000493829 DENND5AQ6IQ26 1287 aa19.52■□□□□ 0.71
USP39-218ENST00000493829 LRRC8BQ6P9F7 803 aa19.52■□□□□ 0.71
USP39-218ENST00000493829 TMEM92Q6UXU6 159 aa19.52■□□□□ 0.71
USP39-218ENST00000493829 DSG4Q86SJ6 1040 aa19.52■□□□□ 0.71
USP39-218ENST00000493829 MCUQ8NE86 351 aa19.52■□□□□ 0.71
USP39-218ENST00000493829 OSBPL1AQ9BXW6 950 aa19.52■□□□□ 0.71
USP39-218ENST00000493829 CASS4Q9NQ75 786 aa19.52■□□□□ 0.71
USP39-218ENST00000493829 MTRF1LQ9UGC7 380 aaKnown RBP19.52■□□□□ 0.71
USP39-218ENST00000493829 PPM1HQ9ULR3 514 aa19.52■□□□□ 0.71
USP39-218ENST00000493829 LOC285095A0A1B0GVY8 99 aa19.51■□□□□ 0.71
USP39-218ENST00000493829 TCRBV21S2A2A0A5A6 115 aa19.51■□□□□ 0.71
USP39-218ENST00000493829 ALOX15BO15296 676 aa19.51■□□□□ 0.71
USP39-218ENST00000493829 HTRA2O43464 458 aaPredicted RBP19.51■□□□□ 0.71
USP39-218ENST00000493829 FZD6O60353 706 aa19.51■□□□□ 0.71
USP39-218ENST00000493829 ALPIP09923 528 aa19.51■□□□□ 0.71
USP39-218ENST00000493829 MGAT1P26572 445 aa19.51■□□□□ 0.71
USP39-218ENST00000493829 TNFRSF8P28908 595 aa19.51■□□□□ 0.71
USP39-218ENST00000493829 COPAP53621 1224 aa19.51■□□□□ 0.71
USP39-218ENST00000493829 ARL4CP56559 192 aa19.51■□□□□ 0.71
USP39-218ENST00000493829 CDH17Q12864 832 aa19.51■□□□□ 0.71
USP39-218ENST00000493829 CERCAMQ5T4B2 595 aa19.51■□□□□ 0.71
USP39-218ENST00000493829 WDR93Q6P2C0 686 aa19.51■□□□□ 0.71
USP39-218ENST00000493829 RANBP10Q6VN20 620 aa19.51■□□□□ 0.71
USP39-218ENST00000493829 CCNI2Q6ZMN8 369 aaPredicted RBP19.51■□□□□ 0.71
USP39-218ENST00000493829 MPP5Q8N3R9 675 aa19.51■□□□□ 0.71
USP39-218ENST00000493829 OR2T3Q8NH03 318 aa19.51■□□□□ 0.71
USP39-218ENST00000493829 EDAQ92838 391 aa19.51■□□□□ 0.71
USP39-218ENST00000493829 ARRDC3Q96B67 414 aa19.51■□□□□ 0.71
USP39-218ENST00000493829 ZNF641Q96N77 438 aaPredicted RBP19.51■□□□□ 0.71
USP39-218ENST00000493829 ADGRE3Q9BY15 652 aa19.51■□□□□ 0.71
USP39-218ENST00000493829 MKRN2Q9H000 416 aaKnown RBP19.51■□□□□ 0.71
USP39-218ENST00000493829 RSPH9Q9H1X1 276 aaPredicted RBP19.51■□□□□ 0.71
USP39-218ENST00000493829 XAB2Q9HCS7 855 aaKnown RBP19.51■□□□□ 0.71
USP39-218ENST00000493829 A0A0U1RQS6 177 aa19.5■□□□□ 0.71
USP39-218ENST00000493829 CCDC78A2IDD5 438 aa19.5■□□□□ 0.71
USP39-218ENST00000493829 C1QTNF3-AMACRE9PGA6 284 aa19.5■□□□□ 0.71
USP39-218ENST00000493829 RNASEH1O60930 286 aaKnown RBP19.5■□□□□ 0.71
USP39-218ENST00000493829 HLA-DPA1P20036 260 aa19.5■□□□□ 0.71
USP39-218ENST00000493829 SATB1Q01826 763 aa19.5■□□□□ 0.71
USP39-218ENST00000493829 DHX9Q08211 1270 aaKnown RBP19.5■□□□□ 0.71
USP39-218ENST00000493829 PDIA2Q13087 525 aaKnown RBP19.5■□□□□ 0.71
USP39-218ENST00000493829 SEPT6Q14141 434 aa19.5■□□□□ 0.71
USP39-218ENST00000493829 POU6F1Q14863 301 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms