RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 KAT7O95251 611 aa12.76□□□□□ -0.37
VPS52-220ENST00000493674 PRKCHP24723 683 aa12.76□□□□□ -0.37
VPS52-220ENST00000493674 PSMA3P25788 255 aa12.76□□□□□ -0.37
VPS52-220ENST00000493674 GRIA2P42262 883 aa12.76□□□□□ -0.37
VPS52-220ENST00000493674 CCNHP51946 323 aaPredicted RBP12.76□□□□□ -0.37
VPS52-220ENST00000493674 RPL26P61254 145 aaKnown RBP12.76□□□□□ -0.37
VPS52-220ENST00000493674 ENPP2Q13822 863 aa12.76□□□□□ -0.37
VPS52-220ENST00000493674 STAT4Q14765 748 aa12.76□□□□□ -0.37
VPS52-220ENST00000493674 CRYMQ14894 314 aa12.76□□□□□ -0.37
VPS52-220ENST00000493674 MYLK3Q32MK0 819 aa12.76□□□□□ -0.37
VPS52-220ENST00000493674 PREPLQ4J6C6 727 aaPredicted RBP12.76□□□□□ -0.37
VPS52-220ENST00000493674 CARD16Q5EG05 197 aa12.76□□□□□ -0.37
VPS52-220ENST00000493674 PCID2Q5JVF3 399 aa12.76□□□□□ -0.37
VPS52-220ENST00000493674 SPANXN3Q5MJ09 141 aa12.76□□□□□ -0.37
VPS52-220ENST00000493674 ZNF449Q6P9G9 518 aa12.76□□□□□ -0.37
VPS52-220ENST00000493674 Q6ZVU0 165 aa12.76□□□□□ -0.37
VPS52-220ENST00000493674 SFTPA1Q8IWL2 248 aa12.76□□□□□ -0.37
VPS52-220ENST00000493674 SLC44A3Q8N4M1 653 aa12.76□□□□□ -0.37
VPS52-220ENST00000493674 DNAAF3Q8N9W5 541 aa12.76□□□□□ -0.37
VPS52-220ENST00000493674 OR2A12Q8NGT7 310 aa12.76□□□□□ -0.37
VPS52-220ENST00000493674 OR2W6PQ8NHA6 318 aa12.76□□□□□ -0.37
VPS52-220ENST00000493674 GSDMBQ8TAX9 411 aa12.76□□□□□ -0.37
VPS52-220ENST00000493674 IFT43Q96FT9 208 aa12.76□□□□□ -0.37
VPS52-220ENST00000493674 TRIM56Q9BRZ2 755 aaKnown RBP12.76□□□□□ -0.37
VPS52-220ENST00000493674 TNKS2Q9H2K2 1166 aa12.76□□□□□ -0.37
VPS52-220ENST00000493674 TMEM245Q9H330 911 aa12.76□□□□□ -0.37
VPS52-220ENST00000493674 ACBD3Q9H3P7 528 aa12.76□□□□□ -0.37
VPS52-220ENST00000493674 MOCS1Q9NZB8 636 aa12.76□□□□□ -0.37
VPS52-220ENST00000493674 EVLQ9UI08 416 aaPredicted RBP12.76□□□□□ -0.37
VPS52-220ENST00000493674 RIMKLBQ9ULI2 386 aa12.76□□□□□ -0.37
VPS52-220ENST00000493674 RPL26L1Q9UNX3 145 aaKnown RBP12.76□□□□□ -0.37
VPS52-220ENST00000493674 ZCWPW2A0A1B0GU75 182 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 TSPAN11A1L157 253 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 MROH6A6NGR9 719 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 TTC34A8MYJ7 566 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 LOC730098B7Z3J9 87 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 PGLSO95336 258 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 PAPSS2O95340 614 aaPredicted RBP12.75□□□□□ -0.37
VPS52-220ENST00000493674 POP4O95707 220 aaKnown RBP12.75□□□□□ -0.37
VPS52-220ENST00000493674 PDHA1P08559 390 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 HNRNPLP14866 589 aaKnown RBP eCLIP12.75□□□□□ -0.37
VPS52-220ENST00000493674 TPH1P17752 444 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 CA4P22748 312 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 ADRA1DP25100 572 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 GCAP28676 217 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 CTHP32929 405 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 PHBP35232 272 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 ACVR1Q04771 509 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 ZP2Q05996 745 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 GALNT3Q14435 633 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 GRM3Q14832 879 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 RASA2Q15283 850 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 PKN3Q6P5Z2 889 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 DPY19L3Q6ZPD9 716 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 C3orf62Q6ZUJ4 267 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 TDRPQ86YL5 185 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 PALM2Q8IXS6 379 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 SLC25A41Q8N5S1 370 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 TTC8Q8TAM2 541 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 CSGALNACT1Q8TDX6 532 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 PIH1D2Q8WWB5 315 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 EZH1Q92800 747 aaPredicted RBP12.75□□□□□ -0.37
VPS52-220ENST00000493674 PTPRN2Q92932 1015 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 PEX13Q92968 403 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 CFAP36Q96G28 342 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 PKNOX2Q96KN3 472 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 FCRL3Q96P31 734 aaPredicted RBP12.75□□□□□ -0.37
VPS52-220ENST00000493674 DHRS4Q9BTZ2 278 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 ROPN1BQ9BZX4 212 aaPredicted RBP12.75□□□□□ -0.37
VPS52-220ENST00000493674 CIPCQ9C0C6 399 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 ATP13A3Q9H7F0 1226 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 VPS37BQ9H9H4 285 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 PPCSQ9HAB8 311 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 ROPN1Q9HAT0 212 aaPredicted RBP12.75□□□□□ -0.37
VPS52-220ENST00000493674 TREX1Q9NSU2 369 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 SAMD15Q9P1V8 674 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 THAP10Q9P2Z0 257 aaPredicted RBP12.75□□□□□ -0.37
VPS52-220ENST00000493674 HECAQ9UBI9 543 aaPredicted RBP12.75□□□□□ -0.37
VPS52-220ENST00000493674 LIMD1Q9UGP4 676 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 CHKBQ9Y259 395 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 PCDHGC4Q9Y5F7 938 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 MAD1L1Q9Y6D9 718 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 WASF2Q9Y6W5 498 aa12.75□□□□□ -0.37
VPS52-220ENST00000493674 TRPM6Q9BX84 2022 aa12.74□□□□□ -0.37
VPS52-220ENST00000493674 PLXND1Q9Y4D7 1925 aa12.74□□□□□ -0.37
VPS52-220ENST00000493674 HEATR9A2RTY3 570 aa12.74□□□□□ -0.37
VPS52-220ENST00000493674 C19orf67A6NJJ6 358 aa12.74□□□□□ -0.37
VPS52-220ENST00000493674 FAM159BA6NKW6 160 aa12.74□□□□□ -0.37
VPS52-220ENST00000493674 ANKRD66B4E2M5 251 aa12.74□□□□□ -0.37
VPS52-220ENST00000493674 SPECC1L-ADORA2AF8WAN1 911 aa12.74□□□□□ -0.37
VPS52-220ENST00000493674 LDB2O43679 373 aa12.74□□□□□ -0.37
VPS52-220ENST00000493674 PIGNO95427 931 aa12.74□□□□□ -0.37
VPS52-220ENST00000493674 SYF2O95926 243 aaKnown RBP12.74□□□□□ -0.37
VPS52-220ENST00000493674 APODP05090 189 aa12.74□□□□□ -0.37
VPS52-220ENST00000493674 POLBP06746 335 aa12.74□□□□□ -0.37
VPS52-220ENST00000493674 STX2P32856 288 aa12.74□□□□□ -0.37
VPS52-220ENST00000493674 NNMTP40261 264 aa12.74□□□□□ -0.37
VPS52-220ENST00000493674 TNFRSF4P43489 277 aa12.74□□□□□ -0.37
VPS52-220ENST00000493674 GRIA4P48058 902 aa12.74□□□□□ -0.37
VPS52-220ENST00000493674 SOX9P48436 509 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms