RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 PSMA7O14818 248 aa14.4□□□□□ -0.1
PRPF40A-211ENST00000493468 HGSO14964 777 aaPredicted RBP14.4□□□□□ -0.1
PRPF40A-211ENST00000493468 NUDT21O43809 227 aaKnown RBP14.4□□□□□ -0.1
PRPF40A-211ENST00000493468 MMP20O60882 483 aa14.4□□□□□ -0.1
PRPF40A-211ENST00000493468 POP4O95707 220 aaKnown RBP14.4□□□□□ -0.1
PRPF40A-211ENST00000493468 ERBB2P04626 1255 aa14.4□□□□□ -0.1
PRPF40A-211ENST00000493468 GKP32189 559 aa14.4□□□□□ -0.1
PRPF40A-211ENST00000493468 SUOXP51687 545 aa14.4□□□□□ -0.1
PRPF40A-211ENST00000493468 SRP54P61011 504 aaKnown RBP14.4□□□□□ -0.1
PRPF40A-211ENST00000493468 PNOCQ13519 176 aa14.4□□□□□ -0.1
PRPF40A-211ENST00000493468 HLTFQ14527 1009 aaKnown RBP eCLIP14.4□□□□□ -0.13e-8■■■□□ 17.2
PRPF40A-211ENST00000493468 C16orf72Q14CZ0 275 aa14.4□□□□□ -0.1
PRPF40A-211ENST00000493468 NCAPHQ15003 741 aa14.4□□□□□ -0.1
PRPF40A-211ENST00000493468 POLD3Q15054 466 aaPredicted RBP14.4□□□□□ -0.1
PRPF40A-211ENST00000493468 KLHL40Q2TBA0 621 aa14.4□□□□□ -0.1
PRPF40A-211ENST00000493468 C14orf28Q4W4Y0 310 aa14.4□□□□□ -0.1
PRPF40A-211ENST00000493468 FOXR2Q6PJQ5 311 aa14.4□□□□□ -0.1
PRPF40A-211ENST00000493468 TMPRSS9Q7Z410 1059 aa14.4□□□□□ -0.1
PRPF40A-211ENST00000493468 Q8N9G6 341 aaPredicted RBP14.4□□□□□ -0.1
PRPF40A-211ENST00000493468 C1orf131Q8NDD1 294 aaKnown RBP14.4□□□□□ -0.1
PRPF40A-211ENST00000493468 OR6K2Q8NGY2 324 aa14.4□□□□□ -0.1
PRPF40A-211ENST00000493468 SPATA20Q8TB22 786 aa14.4□□□□□ -0.1
PRPF40A-211ENST00000493468 FAM81BQ96LP2 452 aa14.4□□□□□ -0.1
PRPF40A-211ENST00000493468 KLHL32Q96NJ5 620 aa14.4□□□□□ -0.1
PRPF40A-211ENST00000493468 HAPLN3Q96S86 360 aa14.4□□□□□ -0.1
PRPF40A-211ENST00000493468 RETREG1Q9H6L5 497 aa14.4□□□□□ -0.1
PRPF40A-211ENST00000493468 UBE2TQ9NPD8 197 aaPredicted RBP14.4□□□□□ -0.1
PRPF40A-211ENST00000493468 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.4□□□□□ -0.16e-9■■□□□ 13.2
PRPF40A-211ENST00000493468 PPARGC1AQ9UBK2 798 aaKnown RBP14.4□□□□□ -0.1
PRPF40A-211ENST00000493468 KLQ9UEF7 1012 aa14.4□□□□□ -0.1
PRPF40A-211ENST00000493468 BLACEA4D250 179 aa14.39□□□□□ -0.11
PRPF40A-211ENST00000493468 TFE3P19532 575 aaPredicted RBP14.39□□□□□ -0.11
PRPF40A-211ENST00000493468 CD97P48960 835 aa14.39□□□□□ -0.11
PRPF40A-211ENST00000493468 SULT1E1P49888 294 aa14.39□□□□□ -0.11
PRPF40A-211ENST00000493468 LRRC14Q15048 493 aa14.39□□□□□ -0.11
PRPF40A-211ENST00000493468 AGERQ15109 404 aa14.39□□□□□ -0.11
PRPF40A-211ENST00000493468 MYLK3Q32MK0 819 aa14.39□□□□□ -0.11
PRPF40A-211ENST00000493468 EFHC2Q5JST6 749 aa14.39□□□□□ -0.11
PRPF40A-211ENST00000493468 PHF19Q5T6S3 580 aa14.39□□□□□ -0.11
PRPF40A-211ENST00000493468 ENPP7Q6UWV6 458 aa14.39□□□□□ -0.11
PRPF40A-211ENST00000493468 GDPD4Q6W3E5 623 aa14.39□□□□□ -0.11
PRPF40A-211ENST00000493468 TTC7BQ86TV6 843 aa14.39□□□□□ -0.11
PRPF40A-211ENST00000493468 TRIM59Q8IWR1 403 aa14.39□□□□□ -0.11
PRPF40A-211ENST00000493468 RYBPQ8N488 228 aaPredicted RBP14.39□□□□□ -0.11
PRPF40A-211ENST00000493468 C9orf43Q8TAL5 461 aaPredicted RBP14.39□□□□□ -0.11
PRPF40A-211ENST00000493468 DHTKD1Q96HY7 919 aaPredicted RBP14.39□□□□□ -0.11
PRPF40A-211ENST00000493468 WDR92Q96MX6 357 aa14.39□□□□□ -0.11
PRPF40A-211ENST00000493468 SEMA6CQ9H3T2 930 aa14.39□□□□□ -0.11
PRPF40A-211ENST00000493468 IGSF5Q9NSI5 407 aa14.39□□□□□ -0.11
PRPF40A-211ENST00000493468 DKK3Q9UBP4 350 aa14.39□□□□□ -0.11
PRPF40A-211ENST00000493468 ACTL7AQ9Y615 435 aa14.39□□□□□ -0.11
PRPF40A-211ENST00000493468 ZNF891A8MT65 544 aaPredicted RBP14.38□□□□□ -0.11
PRPF40A-211ENST00000493468 BECN2A8MW95 431 aa14.38□□□□□ -0.11
PRPF40A-211ENST00000493468 CAPN5O15484 640 aaPredicted RBP14.38□□□□□ -0.11
PRPF40A-211ENST00000493468 CPNE6O95741 557 aa14.38□□□□□ -0.11
PRPF40A-211ENST00000493468 TNFP01375 233 aa14.38□□□□□ -0.11
PRPF40A-211ENST00000493468 LIFP15018 202 aa14.38□□□□□ -0.11
PRPF40A-211ENST00000493468 SCNN1AP37088 669 aa14.38□□□□□ -0.11
PRPF40A-211ENST00000493468 PPP1R2P41236 205 aa14.38□□□□□ -0.11
PRPF40A-211ENST00000493468 ARSDP51689 593 aa14.38□□□□□ -0.11
PRPF40A-211ENST00000493468 MARSP56192 900 aaKnown RBP14.38□□□□□ -0.11
PRPF40A-211ENST00000493468 B4GALNT1Q00973 533 aa14.38□□□□□ -0.11
PRPF40A-211ENST00000493468 DEUP1Q05D60 604 aa14.38□□□□□ -0.11
PRPF40A-211ENST00000493468 ELP6Q0PNE2 266 aa14.38□□□□□ -0.11
PRPF40A-211ENST00000493468 STIM1Q13586 685 aa14.38□□□□□ -0.11
PRPF40A-211ENST00000493468 ARHGEF7Q14155 803 aa14.38□□□□□ -0.11
PRPF40A-211ENST00000493468 WSCD2Q2TBF2 565 aa14.38□□□□□ -0.11
PRPF40A-211ENST00000493468 SLC25A52Q3SY17 297 aa14.38□□□□□ -0.11
PRPF40A-211ENST00000493468 MAP9Q49MG5 647 aa14.38□□□□□ -0.11
PRPF40A-211ENST00000493468 PTPN20Q4JDL3 420 aa14.38□□□□□ -0.11
PRPF40A-211ENST00000493468 TMEM52BQ4KMG9 183 aa14.38□□□□□ -0.11
PRPF40A-211ENST00000493468 MIB2Q96AX9 1013 aa14.38□□□□□ -0.11
PRPF40A-211ENST00000493468 PDXPQ96GD0 296 aa14.38□□□□□ -0.11
PRPF40A-211ENST00000493468 TAAR9Q96RI9 348 aa14.38□□□□□ -0.11
PRPF40A-211ENST00000493468 APOOQ9BUR5 198 aa14.38□□□□□ -0.11
PRPF40A-211ENST00000493468 LRIT1Q9P2V4 623 aa14.38□□□□□ -0.11
PRPF40A-211ENST00000493468 TEP1Q99973 2627 aaKnown RBP14.37□□□□□ -0.11
PRPF40A-211ENST00000493468 SRGAP2O75044 1071 aa14.37□□□□□ -0.11
PRPF40A-211ENST00000493468 HSP90AA1P07900 732 aaKnown RBP14.37□□□□□ -0.11
PRPF40A-211ENST00000493468 CCL4P13236 92 aa14.37□□□□□ -0.11
PRPF40A-211ENST00000493468 ACVRL1P37023 503 aa14.37□□□□□ -0.11
PRPF40A-211ENST00000493468 MAPKAPK2P49137 400 aa14.37□□□□□ -0.11
PRPF40A-211ENST00000493468 RAD51Q06609 339 aa14.37□□□□□ -0.11
PRPF40A-211ENST00000493468 MTM1Q13496 603 aa14.37□□□□□ -0.11
PRPF40A-211ENST00000493468 NR1D2Q14995 579 aa14.37□□□□□ -0.11
PRPF40A-211ENST00000493468 TCEA2Q15560 299 aa14.37□□□□□ -0.11
PRPF40A-211ENST00000493468 LRRC73Q5JTD7 316 aa14.37□□□□□ -0.11
PRPF40A-211ENST00000493468 RD3Q7Z3Z2 195 aa14.37□□□□□ -0.11
PRPF40A-211ENST00000493468 BNIPLQ7Z465 357 aa14.37□□□□□ -0.11
PRPF40A-211ENST00000493468 ZNF438Q7Z4V0 828 aa14.37□□□□□ -0.11
PRPF40A-211ENST00000493468 PIM3Q86V86 326 aa14.37□□□□□ -0.11
PRPF40A-211ENST00000493468 PASD1Q8IV76 773 aa14.37□□□□□ -0.11
PRPF40A-211ENST00000493468 DRC7Q8IY82 874 aa14.37□□□□□ -0.11
PRPF40A-211ENST00000493468 IL22RA1Q8N6P7 574 aa14.37□□□□□ -0.11
PRPF40A-211ENST00000493468 GDAP1L1Q96MZ0 367 aa14.37□□□□□ -0.11
PRPF40A-211ENST00000493468 TBCBQ99426 244 aa14.37□□□□□ -0.11
PRPF40A-211ENST00000493468 WRAP53Q9BUR4 548 aaKnown RBP14.37□□□□□ -0.11
PRPF40A-211ENST00000493468 DDA1Q9BW61 102 aa14.37□□□□□ -0.11
PRPF40A-211ENST00000493468 SCAND2PQ9GZW5 306 aaPredicted RBP14.37□□□□□ -0.11
PRPF40A-211ENST00000493468 SYNCQ9H7C4 482 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms