RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 SLC4A4Q9Y6R1 1079 aa3.47□□□□□ -1.85
PTCD3-218ENST00000493430 EVPLQ92817 2033 aa3.47□□□□□ -1.85
PTCD3-218ENST00000493430 MED23Q9ULK4 1368 aa3.47□□□□□ -1.85
PTCD3-218ENST00000493430 TNRC18O15417 2968 aaPredicted RBP3.47□□□□□ -1.85
PTCD3-218ENST00000493430 TRIP12Q14669 1992 aaPredicted RBP3.47□□□□□ -1.85
PTCD3-218ENST00000493430 LTBP2Q14767 1821 aa3.47□□□□□ -1.85
PTCD3-218ENST00000493430 SCN5AQ14524 2016 aa3.46□□□□□ -1.86
PTCD3-218ENST00000493430 ZNF609O15014 1411 aa3.46□□□□□ -1.86
PTCD3-218ENST00000493430 CYP3A7-CYP3A51PA0A087WV96 503 aa3.46□□□□□ -1.86
PTCD3-218ENST00000493430 LOC105369274A0A096LPK9 316 aa3.46□□□□□ -1.86
PTCD3-218ENST00000493430 LOC102723532A0A0G2JNH3 316 aa3.46□□□□□ -1.86
PTCD3-218ENST00000493430 M0QYT0 321 aa3.46□□□□□ -1.86
PTCD3-218ENST00000493430 GRM8O00222 908 aa3.46□□□□□ -1.86
PTCD3-218ENST00000493430 LINC01565O15544 149 aa3.46□□□□□ -1.86
PTCD3-218ENST00000493430 GRID2O43424 1007 aa3.46□□□□□ -1.86
PTCD3-218ENST00000493430 CER1O95813 267 aa3.46□□□□□ -1.86
PTCD3-218ENST00000493430 CYP3A4P08684 503 aa3.46□□□□□ -1.86
PTCD3-218ENST00000493430 HOXB7P09629 217 aa3.46□□□□□ -1.86
PTCD3-218ENST00000493430 CYP3A7P24462 503 aa3.46□□□□□ -1.86
PTCD3-218ENST00000493430 ADPRHP54922 357 aa3.46□□□□□ -1.86
PTCD3-218ENST00000493430 HUNKP57058 714 aa3.46□□□□□ -1.86
PTCD3-218ENST00000493430 SHROOM1Q2M3G4 852 aaPredicted RBP3.46□□□□□ -1.86
PTCD3-218ENST00000493430 CCDC152Q4G0S7 254 aa3.46□□□□□ -1.86
PTCD3-218ENST00000493430 FSCBQ5H9T9 825 aa3.46□□□□□ -1.86
PTCD3-218ENST00000493430 HIBCHQ6NVY1 386 aaPredicted RBP3.46□□□□□ -1.86
PTCD3-218ENST00000493430 SPSB3Q6PJ21 355 aa3.46□□□□□ -1.86
PTCD3-218ENST00000493430 ZNF329Q86UD4 541 aa3.46□□□□□ -1.86
PTCD3-218ENST00000493430 KLBQ86Z14 1044 aa3.46□□□□□ -1.86
PTCD3-218ENST00000493430 OR4N4Q8N0Y3 316 aa3.46□□□□□ -1.86
PTCD3-218ENST00000493430 CCDC191Q8NCU4 936 aa3.46□□□□□ -1.86
PTCD3-218ENST00000493430 WDR60Q8WVS4 1066 aa3.46□□□□□ -1.86
PTCD3-218ENST00000493430 BRI3BPQ8WY22 251 aa3.46□□□□□ -1.86
PTCD3-218ENST00000493430 MCRS1Q96EZ8 462 aa3.46□□□□□ -1.86
PTCD3-218ENST00000493430 POLDIP3Q9BY77 421 aaKnown RBP3.46□□□□□ -1.86
PTCD3-218ENST00000493430 PNNQ9H307 717 aaKnown RBP3.46□□□□□ -1.86
PTCD3-218ENST00000493430 EPS8L2Q9H6S3 715 aa3.46□□□□□ -1.86
PTCD3-218ENST00000493430 ZNF556Q9HAH1 456 aa3.46□□□□□ -1.86
PTCD3-218ENST00000493430 ZNF304Q9HCX3 659 aa3.46□□□□□ -1.86
PTCD3-218ENST00000493430 NECTIN3Q9NQS3 549 aa3.46□□□□□ -1.86
PTCD3-218ENST00000493430 SMC4Q9NTJ3 1288 aa3.46□□□□□ -1.86
PTCD3-218ENST00000493430 FBXO4Q9UKT5 387 aa3.46□□□□□ -1.86
PTCD3-218ENST00000493430 SLC12A4Q9UP95 1085 aa3.46□□□□□ -1.86
PTCD3-218ENST00000493430 LRRFIP2Q9Y608 721 aaKnown RBP3.46□□□□□ -1.86
PTCD3-218ENST00000493430 BAZ2BQ9UIF8 2168 aaKnown RBP3.45□□□□□ -1.86
PTCD3-218ENST00000493430 A0A087WYN8 130 aa3.45□□□□□ -1.86
PTCD3-218ENST00000493430 A0A1B0GUV1 79 aa3.45□□□□□ -1.86
PTCD3-218ENST00000493430 SAC3D1A6NKF1 404 aa3.45□□□□□ -1.86
PTCD3-218ENST00000493430 MCIDASD6RGH6 385 aa3.45□□□□□ -1.86
PTCD3-218ENST00000493430 MS4A18H0YCH9 400 aa3.45□□□□□ -1.86
PTCD3-218ENST00000493430 I6L893 689 aaPredicted RBP3.45□□□□□ -1.86
PTCD3-218ENST00000493430 VWA5AO00534 786 aa3.45□□□□□ -1.86
PTCD3-218ENST00000493430 BBOX1O75936 387 aa3.45□□□□□ -1.86
PTCD3-218ENST00000493430 FGF18O76093 207 aa3.45□□□□□ -1.86
PTCD3-218ENST00000493430 DDX58O95786 925 aaKnown RBP3.45□□□□□ -1.86
PTCD3-218ENST00000493430 GLP2RO95838 553 aa3.45□□□□□ -1.86
PTCD3-218ENST00000493430 HARSP12081 509 aaKnown RBP3.45□□□□□ -1.86
PTCD3-218ENST00000493430 FCGR1AP12314 374 aa3.45□□□□□ -1.86
PTCD3-218ENST00000493430 SLC5A1P13866 664 aa3.45□□□□□ -1.86
PTCD3-218ENST00000493430 CHRNB2P17787 502 aa3.45□□□□□ -1.86
PTCD3-218ENST00000493430 TNFSF8P32971 234 aa3.45□□□□□ -1.86
PTCD3-218ENST00000493430 GRK5P34947 590 aa3.45□□□□□ -1.86
PTCD3-218ENST00000493430 FOXL2P58012 376 aa3.45□□□□□ -1.86
PTCD3-218ENST00000493430 ERVFC1-1P60608 527 aa3.45□□□□□ -1.86
PTCD3-218ENST00000493430 RPL15P61313 204 aaKnown RBP3.45□□□□□ -1.86
PTCD3-218ENST00000493430 KIF5AQ12840 1032 aa3.45□□□□□ -1.86
PTCD3-218ENST00000493430 PMS2P11Q13670 270 aa3.45□□□□□ -1.86
PTCD3-218ENST00000493430 GRM4Q14833 912 aa3.45□□□□□ -1.86
PTCD3-218ENST00000493430 DEFB115Q30KQ5 88 aa3.45□□□□□ -1.86
PTCD3-218ENST00000493430 TDRD12Q587J7 1177 aaKnown RBP3.45□□□□□ -1.86
PTCD3-218ENST00000493430 ARL6IP4Q66PJ3 421 aaKnown RBP3.45□□□□□ -1.86
PTCD3-218ENST00000493430 AAGABQ6PD74 315 aa3.45□□□□□ -1.86
PTCD3-218ENST00000493430 TRABD2AQ86V40 505 aa3.45□□□□□ -1.86
PTCD3-218ENST00000493430 WDR75Q8IWA0 830 aaKnown RBP3.45□□□□□ -1.86
PTCD3-218ENST00000493430 KDM1BQ8NB78 822 aa3.45□□□□□ -1.86
PTCD3-218ENST00000493430 LINS1Q8NG48 757 aa3.45□□□□□ -1.86
PTCD3-218ENST00000493430 ADAMTS14Q8WXS8 1223 aa3.45□□□□□ -1.86
PTCD3-218ENST00000493430 REXO5Q96IC2 774 aaKnown RBP3.45□□□□□ -1.86
PTCD3-218ENST00000493430 B3GNT4Q9C0J1 378 aa3.45□□□□□ -1.86
PTCD3-218ENST00000493430 VEZTQ9HBM0 779 aa3.45□□□□□ -1.86
PTCD3-218ENST00000493430 MYOZ2Q9NPC6 264 aa3.45□□□□□ -1.86
PTCD3-218ENST00000493430 BABAM1Q9NWV8 329 aa3.45□□□□□ -1.86
PTCD3-218ENST00000493430 PLEKHB1Q9UF11 243 aaPredicted RBP3.45□□□□□ -1.86
PTCD3-218ENST00000493430 ERRFI1Q9UJM3 462 aaPredicted RBP3.45□□□□□ -1.86
PTCD3-218ENST00000493430 DTX4Q9Y2E6 619 aa3.45□□□□□ -1.86
PTCD3-218ENST00000493430 MYH9P35579 1960 aaKnown RBP3.45□□□□□ -1.86
PTCD3-218ENST00000493430 CEP290O15078 2479 aa3.45□□□□□ -1.86
PTCD3-218ENST00000493430 IL16Q14005 1332 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 TBC1D3DA0A087WVF3 549 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 TBC1D3IA0A087WXS9 549 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 TBC1D3EA0A087X179 549 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 TBC1D3KA0A087X1G2 549 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 ANKRD18BA2A2Z9 1011 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 TBC1D3BA6NDS4 549 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 TBC1D3FA6NER0 549 aaPredicted RBP3.44□□□□□ -1.86
PTCD3-218ENST00000493430 SMTNL1A8MU46 457 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 TBC1D3LB9A6J9 549 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 TCP10L2B9ZVM9 353 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 HNRNPDLO14979 420 aaKnown RBP3.44□□□□□ -1.86
PTCD3-218ENST00000493430 LIASO43766 372 aa3.44□□□□□ -1.86
PTCD3-218ENST00000493430 PPP1R3DO95685 299 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms