RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 CAMK1DQ8IU85 385 aa17.43■□□□□ 0.38
SGMS1-204ENST00000492601 FAM181AQ8N9Y4 354 aa17.43■□□□□ 0.38
SGMS1-204ENST00000492601 TP53I13Q8NBR0 393 aaPredicted RBP17.43■□□□□ 0.38
SGMS1-204ENST00000492601 CRELD1Q96HD1 420 aa17.43■□□□□ 0.38
SGMS1-204ENST00000492601 C1QTNF7Q9BXJ2 289 aa17.43■□□□□ 0.38
SGMS1-204ENST00000492601 NRSN2Q9GZP1 204 aa17.43■□□□□ 0.38
SGMS1-204ENST00000492601 SUV39H2Q9H5I1 410 aa17.43■□□□□ 0.38
SGMS1-204ENST00000492601 DONSONQ9NYP3 566 aa17.43■□□□□ 0.38
SGMS1-204ENST00000492601 PNMA8BQ9ULN7 279 aaPredicted RBP17.43■□□□□ 0.38
SGMS1-204ENST00000492601 SMG1Q96Q15 3661 aaKnown RBP17.43■□□□□ 0.38
SGMS1-204ENST00000492601 UNC13CQ8NB66 2214 aa17.43■□□□□ 0.38
SGMS1-204ENST00000492601 EIF3CLB5ME19 914 aaKnown RBP17.42■□□□□ 0.38
SGMS1-204ENST00000492601 DFFAO00273 331 aa17.42■□□□□ 0.38
SGMS1-204ENST00000492601 TLX3O43711 291 aaPredicted RBP17.42■□□□□ 0.38
SGMS1-204ENST00000492601 SERPINC1P01008 464 aa17.42■□□□□ 0.38
SGMS1-204ENST00000492601 PRKCGP05129 697 aa17.42■□□□□ 0.38
SGMS1-204ENST00000492601 ERCC2P18074 760 aa17.42■□□□□ 0.38
SGMS1-204ENST00000492601 RGRP47804 291 aa17.42■□□□□ 0.38
SGMS1-204ENST00000492601 ELP6Q0PNE2 266 aa17.42■□□□□ 0.38
SGMS1-204ENST00000492601 C1orf61Q13536 156 aa17.42■□□□□ 0.38
SGMS1-204ENST00000492601 PTK2BQ14289 1009 aa17.42■□□□□ 0.38
SGMS1-204ENST00000492601 RTP5Q14D33 572 aa17.42■□□□□ 0.38
SGMS1-204ENST00000492601 IQCB1Q15051 598 aa17.42■□□□□ 0.38
SGMS1-204ENST00000492601 IRF4Q15306 451 aa17.42■□□□□ 0.38
SGMS1-204ENST00000492601 CDKN3Q16667 212 aa17.42■□□□□ 0.38
SGMS1-204ENST00000492601 UGP2Q16851 508 aa17.42■□□□□ 0.38
SGMS1-204ENST00000492601 CFAP58Q5T655 872 aa17.42■□□□□ 0.38
SGMS1-204ENST00000492601 ZCCHC8Q6NZY4 707 aaKnown RBP17.42■□□□□ 0.38
SGMS1-204ENST00000492601 ARHGAP36Q6ZRI8 547 aa17.42■□□□□ 0.38
SGMS1-204ENST00000492601 ARHGAP12Q8IWW6 846 aa17.42■□□□□ 0.38
SGMS1-204ENST00000492601 NPWQ8N729 165 aa17.42■□□□□ 0.38
SGMS1-204ENST00000492601 TSEN2Q8NCE0 465 aaKnown RBP17.42■□□□□ 0.38
SGMS1-204ENST00000492601 EIF3CQ99613 913 aaKnown RBP17.42■□□□□ 0.38
SGMS1-204ENST00000492601 IL12RB2Q99665 862 aa17.42■□□□□ 0.38
SGMS1-204ENST00000492601 SP110Q9HB58 689 aa17.42■□□□□ 0.38
SGMS1-204ENST00000492601 PCDH12Q9NPG4 1184 aa17.42■□□□□ 0.38
SGMS1-204ENST00000492601 APOBEC3BQ9UH17 382 aaKnown RBP17.42■□□□□ 0.38
SGMS1-204ENST00000492601 PCDHB1Q9Y5F3 818 aa17.42■□□□□ 0.38
SGMS1-204ENST00000492601 CSNK1G3Q9Y6M4 447 aa17.42■□□□□ 0.38
SGMS1-204ENST00000492601 A0A087WV48 116 aa17.41■□□□□ 0.38
SGMS1-204ENST00000492601 TSPAN11A1L157 253 aa17.41■□□□□ 0.38
SGMS1-204ENST00000492601 CPED1A4D0V7 1026 aa17.41■□□□□ 0.38
SGMS1-204ENST00000492601 BRINP1O60477 761 aa17.41■□□□□ 0.38
SGMS1-204ENST00000492601 LRCH4O75427 683 aa17.41■□□□□ 0.38
SGMS1-204ENST00000492601 GCATO75600 419 aa17.41■□□□□ 0.38
SGMS1-204ENST00000492601 PALMO75781 387 aa17.41■□□□□ 0.38
SGMS1-204ENST00000492601 EIF4A3P38919 411 aaKnown RBP17.41■□□□□ 0.38
SGMS1-204ENST00000492601 DUSP3P51452 185 aaPredicted RBP17.41■□□□□ 0.38
SGMS1-204ENST00000492601 YPEL5P62699 121 aa17.41■□□□□ 0.38
SGMS1-204ENST00000492601 GRM3Q14832 879 aa17.41■□□□□ 0.38
SGMS1-204ENST00000492601 NR1I3Q14994 352 aa17.41■□□□□ 0.38
SGMS1-204ENST00000492601 PRRT3Q5FWE3 981 aa17.41■□□□□ 0.38
SGMS1-204ENST00000492601 FAXCQ5TGI0 409 aa17.41■□□□□ 0.38
SGMS1-204ENST00000492601 AFMIDQ63HM1 303 aa17.41■□□□□ 0.38
SGMS1-204ENST00000492601 SRLQ86TD4 932 aa17.41■□□□□ 0.38
SGMS1-204ENST00000492601 ZSWIM9Q86XI8 627 aa17.41■□□□□ 0.38
SGMS1-204ENST00000492601 PHACTR4Q8IZ21 702 aa17.41■□□□□ 0.38
SGMS1-204ENST00000492601 CACTIN-AS1Q8N1I8 211 aa17.41■□□□□ 0.38
SGMS1-204ENST00000492601 IFI44Q8TCB0 444 aa17.41■□□□□ 0.38
SGMS1-204ENST00000492601 MAPK15Q8TD08 544 aa17.41■□□□□ 0.38
SGMS1-204ENST00000492601 HCAR2Q8TDS4 363 aa17.41■□□□□ 0.38
SGMS1-204ENST00000492601 FNIP1Q8TF40 1166 aa17.41■□□□□ 0.38
SGMS1-204ENST00000492601 BTN2A2Q8WVV5 523 aa17.41■□□□□ 0.38
SGMS1-204ENST00000492601 FUCA2Q9BTY2 467 aa17.41■□□□□ 0.38
SGMS1-204ENST00000492601 ABCG4Q9H172 646 aa17.41■□□□□ 0.38
SGMS1-204ENST00000492601 USP29Q9HBJ7 922 aa17.41■□□□□ 0.38
SGMS1-204ENST00000492601 EVA1BQ9NVM1 165 aa17.41■□□□□ 0.38
SGMS1-204ENST00000492601 SPASTQ9UBP0 616 aa17.41■□□□□ 0.38
SGMS1-204ENST00000492601 SCINQ9Y6U3 715 aa17.41■□□□□ 0.38
SGMS1-204ENST00000492601 RIOK3O14730 519 aaKnown RBP17.4■□□□□ 0.38
SGMS1-204ENST00000492601 GP1BAP07359 652 aa17.4■□□□□ 0.38
SGMS1-204ENST00000492601 C6P13671 934 aa17.4■□□□□ 0.38
SGMS1-204ENST00000492601 ITPKBP27987 946 aa17.4■□□□□ 0.38
SGMS1-204ENST00000492601 SUOXP51687 545 aa17.4■□□□□ 0.38
SGMS1-204ENST00000492601 ADKP55263 362 aaKnown RBP17.4■□□□□ 0.38
SGMS1-204ENST00000492601 LRRC14Q15048 493 aa17.4■□□□□ 0.38
SGMS1-204ENST00000492601 TCEA2Q15560 299 aa17.4■□□□□ 0.38
SGMS1-204ENST00000492601 CDCP2Q5VXM1 449 aa17.4■□□□□ 0.38
SGMS1-204ENST00000492601 ERAP2Q6P179 960 aa17.4■□□□□ 0.38
SGMS1-204ENST00000492601 GUSBP11Q6P575 273 aa17.4■□□□□ 0.38
SGMS1-204ENST00000492601 MACC1Q6ZN28 852 aa17.4■□□□□ 0.38
SGMS1-204ENST00000492601 TP53INP2Q8IXH6 220 aa17.4■□□□□ 0.38
SGMS1-204ENST00000492601 PAF1Q8N7H5 531 aa17.4■□□□□ 0.38
SGMS1-204ENST00000492601 ZNF641Q96N77 438 aaPredicted RBP17.4■□□□□ 0.38
SGMS1-204ENST00000492601 LRRC61Q9BV99 259 aa17.4■□□□□ 0.38
SGMS1-204ENST00000492601 CINPQ9BW66 212 aaPredicted RBP17.4■□□□□ 0.38
SGMS1-204ENST00000492601 EDEM3Q9BZQ6 932 aa17.4■□□□□ 0.38
SGMS1-204ENST00000492601 SLC13A1Q9BZW2 595 aa17.4■□□□□ 0.38
SGMS1-204ENST00000492601 ATP13A3Q9H7F0 1226 aa17.4■□□□□ 0.38
SGMS1-204ENST00000492601 CWC15Q9P013 229 aaKnown RBP17.4■□□□□ 0.38
SGMS1-204ENST00000492601 ATP8A1Q9Y2Q0 1164 aa17.4■□□□□ 0.38
SGMS1-204ENST00000492601 LZTS3O60299 673 aaPredicted RBP17.39■□□□□ 0.37
SGMS1-204ENST00000492601 CSO75390 466 aaKnown RBP17.39■□□□□ 0.37
SGMS1-204ENST00000492601 TCF4P15884 667 aa17.39■□□□□ 0.37
SGMS1-204ENST00000492601 SERPINA4P29622 427 aa17.39■□□□□ 0.37
SGMS1-204ENST00000492601 MMP12P39900 470 aa17.39■□□□□ 0.37
SGMS1-204ENST00000492601 EIF2S3P41091 472 aaKnown RBP17.39■□□□□ 0.37
SGMS1-204ENST00000492601 ABCG1P45844 678 aa17.39■□□□□ 0.37
SGMS1-204ENST00000492601 CSNK1DP48730 415 aa17.39■□□□□ 0.37
SGMS1-204ENST00000492601 LIG3P49916 1009 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms