RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 DNAI1Q9UI46 699 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 KLF15Q9UIH9 416 aa9.24□□□□□ -0.93
HDAC3-212ENST00000492407 CPED1A4D0V7 1026 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 LRRC10BA6NIK2 292 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 CDRT15L2A8MXV6 281 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 FAM72CH0Y354 149 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 NTN3O00634 580 aaPredicted RBP9.23□□□□□ -0.93
HDAC3-212ENST00000492407 YY2O15391 372 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 COQ9O75208 318 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 C1QL1O75973 258 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 NEBLO76041 1014 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 TMCC1O94876 653 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 HOXC4P09017 264 aaPredicted RBP9.23□□□□□ -0.93
HDAC3-212ENST00000492407 CCDC172P0C7W6 258 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 TIMP2P16035 220 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 GPD1P21695 349 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 TGM2P21980 687 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 XPAP23025 273 aaPredicted RBP9.23□□□□□ -0.93
HDAC3-212ENST00000492407 HTR1BP28222 390 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 EPHB2P29323 1055 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 RFC1P35251 1148 aaPredicted RBP9.23□□□□□ -0.93
HDAC3-212ENST00000492407 EIF4A3P38919 411 aaKnown RBP9.23□□□□□ -0.93
HDAC3-212ENST00000492407 NDST2P52849 883 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 ADKP55263 362 aaKnown RBP9.23□□□□□ -0.93
HDAC3-212ENST00000492407 POLR2FP61218 127 aaKnown RBP9.23□□□□□ -0.93
HDAC3-212ENST00000492407 RHOAP61586 193 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 CFHR1Q03591 330 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 VAC14Q08AM6 782 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 CDKN3Q16667 212 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 CDO1Q16878 200 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 CLEC16AQ2KHT3 1053 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 DEFB133Q30KQ1 61 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 PRRT3Q5FWE3 981 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 FAXCQ5TGI0 409 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 FAM72AQ5TYM5 149 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 FAM72DQ6L9T8 149 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 GUSBP11Q6P575 273 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 BRAT1Q6PJG6 821 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 WDR59Q6PJI9 974 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 CLEC17AQ6ZS10 378 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 ZNF605Q86T29 641 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 FAM72BQ86X60 149 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 DNAAF5Q86Y56 855 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 ARL10Q8N8L6 244 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 TP53I13Q8NBR0 393 aaPredicted RBP9.23□□□□□ -0.93
HDAC3-212ENST00000492407 ANKRD20A12PQ8NF67 263 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 JOSD2Q8TAC2 188 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 GPT2Q8TD30 523 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 SLC20A1Q8WUM9 679 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 LIN37Q96GY3 246 aaPredicted RBP9.23□□□□□ -0.93
HDAC3-212ENST00000492407 TUBGCP5Q96RT8 1024 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 EPAS1Q99814 870 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 C11orf70Q9BRQ4 267 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 PADI4Q9UM07 663 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 PCDHGA7Q9Y5G6 932 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 ENTPD2Q9Y5L3 495 aa9.23□□□□□ -0.93
HDAC3-212ENST00000492407 TP53BP1Q12888 1972 aaPredicted RBP9.23□□□□□ -0.93
HDAC3-212ENST00000492407 CCDC187A0A096LP49 1063 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 TCRBV5S1A1TA0A578 114 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 RASA4BC9J798 803 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 KLK10O43240 276 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 RASA4O43374 803 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 MMP20O60882 483 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 GCATO75600 419 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 RASGRP1O95267 797 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 ITGA2BP08514 1039 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 PNLIPP16233 465 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 TSHRP16473 764 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 GKP32189 559 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 IGFALSP35858 605 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 CD151P48509 253 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 ZNF135P52742 658 aaPredicted RBP9.22□□□□□ -0.93
HDAC3-212ENST00000492407 HK3P52790 923 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 NSUN2Q08J23 767 aaKnown RBP eCLIP9.22□□□□□ -0.93
HDAC3-212ENST00000492407 LRRC14Q15048 493 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 KRT31Q15323 416 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 SYCP1Q15431 976 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 UGP2Q16851 508 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 TPRG1LQ5T0D9 272 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 ERAP2Q6P179 960 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 VPS36Q86VN1 386 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 GKN2Q86XP6 184 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 SLC35F3Q8IY50 421 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 ZNF843Q8N446 348 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 CCDC185Q8N715 623 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 MNS1Q8NEH6 495 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 OR6K2Q8NGY2 324 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 SLC30A5Q8TAD4 765 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 SPOCK2Q92563 424 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 TMEM159Q96B96 161 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 ATXN7L3BQ96GX2 97 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 PRR11Q96HE9 360 aaPredicted RBP9.22□□□□□ -0.93
HDAC3-212ENST00000492407 VCPIP1Q96JH7 1222 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 CNPY3Q9BT09 278 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 LRRC61Q9BV99 259 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 EDEM3Q9BZQ6 932 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 B3GNT4Q9C0J1 378 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 SUV39H2Q9H5I1 410 aa9.22□□□□□ -0.93
HDAC3-212ENST00000492407 NOL6Q9H6R4 1146 aaKnown RBP9.22□□□□□ -0.93
HDAC3-212ENST00000492407 FAM207AQ9NSI2 230 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms