RNA–Protein interactions for RNA: ENST00000492348.6

RBBP4-214, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 1,547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-214ENST00000492348 POLBP06746 335 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 CNPP09543 421 aaKnown RBP7.16□□□□□ -1.26
RBBP4-214ENST00000492348 SPATA31D3P0C874 917 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 IRF1P10914 325 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 CNTFP26441 200 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 ARNTP27540 789 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 MAGEA12P43365 314 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 NPY2RP49146 381 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 NUMBP49757 651 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 WNT3AP56704 352 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 YBEYP58557 167 aaPredicted RBP7.16□□□□□ -1.26
RBBP4-214ENST00000492348 ZXDBP98169 803 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 CREMQ03060 361 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 PLAURQ03405 335 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 MTA1Q13330 715 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 MPP3Q13368 585 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 MSLNQ13421 630 aaPredicted RBP7.16□□□□□ -1.26
RBBP4-214ENST00000492348 HNRNPDQ14103 355 aaKnown RBP7.16□□□□□ -1.26
RBBP4-214ENST00000492348 VEPH1Q14D04 833 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 POLD3Q15054 466 aaPredicted RBP7.16□□□□□ -1.26
RBBP4-214ENST00000492348 SPRED3Q2MJR0 410 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 GKAP1Q5VSY0 366 aaPredicted RBP7.16□□□□□ -1.26
RBBP4-214ENST00000492348 ALG1LQ6GMV1 187 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 CXorf57Q6NSI4 855 aaKnown RBP7.16□□□□□ -1.26
RBBP4-214ENST00000492348 TIFABQ6ZNK6 161 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 SPATA31D4Q6ZUB0 917 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 CPLX4Q7Z7G2 160 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 SRLQ86TD4 932 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 LINC00523Q86TU6 105 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 CCDC117Q8IWD4 279 aaPredicted RBP7.16□□□□□ -1.26
RBBP4-214ENST00000492348 CACNA2D3Q8IZS8 1091 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 OR7D4Q8NG98 312 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 ARRDC2Q8TBH0 407 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 PTPRN2Q92932 1015 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 ISL2Q96A47 359 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 AZIN2Q96A70 460 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 PABPC5Q96DU9 382 aaKnown RBP7.16□□□□□ -1.26
RBBP4-214ENST00000492348 MTBPQ96DY7 904 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 ZNF778Q96MU6 729 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 PPP1R2P1Q96PQ5 205 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 FAM111AQ96PZ2 611 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 SRPK1Q96SB4 655 aaKnown RBP7.16□□□□□ -1.26
RBBP4-214ENST00000492348 AGAP2Q99490 1192 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 RBBP8Q99708 897 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 PAIP2Q9BPZ3 127 aaKnown RBP7.16□□□□□ -1.26
RBBP4-214ENST00000492348 LRRC3Q9BY71 257 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 NACA2Q9H009 215 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 NSRP1Q9H0G5 558 aaKnown RBP7.16□□□□□ -1.26
RBBP4-214ENST00000492348 IGFLR1Q9H665 355 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 MRM3Q9HC36 420 aaKnown RBP7.16□□□□□ -1.26
RBBP4-214ENST00000492348 CHRAC1Q9NRG0 131 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.16□□□□□ -1.26
RBBP4-214ENST00000492348 MRPL17Q9NRX2 175 aaKnown RBP7.16□□□□□ -1.26
RBBP4-214ENST00000492348 GKN1Q9NS71 199 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 PCMTD2Q9NV79 361 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 PRKAG3Q9UGI9 489 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 STOML2Q9UJZ1 356 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 AGO1Q9UL18 857 aaKnown RBP7.16□□□□□ -1.26
RBBP4-214ENST00000492348 AAR2Q9Y312 384 aaKnown RBP7.16□□□□□ -1.26
RBBP4-214ENST00000492348 RRP15Q9Y3B9 282 aaKnown RBP7.16□□□□□ -1.26
RBBP4-214ENST00000492348 TCAF1Q9Y4C2 921 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 ACTL7AQ9Y615 435 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 LAMA2P24043 3122 aaKnown RBP7.16□□□□□ -1.26
RBBP4-214ENST00000492348 ANKRD12Q6UB98 2062 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 CHD7Q9P2D1 2997 aa7.16□□□□□ -1.26
RBBP4-214ENST00000492348 PLXNA2O75051 1894 aa7.15□□□□□ -1.26
RBBP4-214ENST00000492348 CHD9Q3L8U1 2897 aa7.15□□□□□ -1.27
RBBP4-214ENST00000492348 A0A0D9SEW6 157 aa7.15□□□□□ -1.27
RBBP4-214ENST00000492348 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.15□□□□□ -1.27
RBBP4-214ENST00000492348 CCDC78A2IDD5 438 aa7.15□□□□□ -1.27
RBBP4-214ENST00000492348 TPP1O14773 563 aa7.15□□□□□ -1.27
RBBP4-214ENST00000492348 SCAMP3O14828 347 aaKnown RBP7.15□□□□□ -1.27
RBBP4-214ENST00000492348 SNX3O60493 162 aa7.15□□□□□ -1.27
RBBP4-214ENST00000492348 KRT38O76015 456 aa7.15□□□□□ -1.27
RBBP4-214ENST00000492348 PRKCGP05129 697 aa7.15□□□□□ -1.27
RBBP4-214ENST00000492348 ITGA2BP08514 1039 aa7.15□□□□□ -1.27
RBBP4-214ENST00000492348 ATXN1LP0C7T5 689 aaKnown RBP7.15□□□□□ -1.27
RBBP4-214ENST00000492348 MBL2P11226 248 aaPredicted RBP7.15□□□□□ -1.27
RBBP4-214ENST00000492348 CES1P23141 567 aa7.15□□□□□ -1.27
RBBP4-214ENST00000492348 GLDCP23378 1020 aa7.15□□□□□ -1.27
RBBP4-214ENST00000492348 OR1E1P30953 314 aa7.15□□□□□ -1.27
RBBP4-214ENST00000492348 SOX18P35713 384 aa7.15□□□□□ -1.27
RBBP4-214ENST00000492348 ETFBP38117 255 aa7.15□□□□□ -1.27
RBBP4-214ENST00000492348 GP5P40197 560 aa7.15□□□□□ -1.27
RBBP4-214ENST00000492348 CD86P42081 329 aa7.15□□□□□ -1.27
RBBP4-214ENST00000492348 ABCG1P45844 678 aa7.15□□□□□ -1.27
RBBP4-214ENST00000492348 SLC11A2P49281 568 aa7.15□□□□□ -1.27
RBBP4-214ENST00000492348 HARS2P49590 506 aaKnown RBP7.15□□□□□ -1.27
RBBP4-214ENST00000492348 RENBPP51606 427 aa7.15□□□□□ -1.27
RBBP4-214ENST00000492348 EPHB3P54753 998 aa7.15□□□□□ -1.27
RBBP4-214ENST00000492348 CDH4P55283 916 aa7.15□□□□□ -1.27
RBBP4-214ENST00000492348 CYP4F8P98187 520 aa7.15□□□□□ -1.27
RBBP4-214ENST00000492348 GNA12Q03113 381 aa7.15□□□□□ -1.27
RBBP4-214ENST00000492348 FPGSQ05932 587 aa7.15□□□□□ -1.27
RBBP4-214ENST00000492348 SF3A3Q12874 501 aaKnown RBP eCLIP7.15□□□□□ -1.27
RBBP4-214ENST00000492348 DNAJC3Q13217 504 aa7.15□□□□□ -1.27
RBBP4-214ENST00000492348 PPIGQ13427 754 aaKnown RBP eCLIP7.15□□□□□ -1.273e-8■□□□□ 9.9
RBBP4-214ENST00000492348 ITIH4Q14624 930 aa7.15□□□□□ -1.27
RBBP4-214ENST00000492348 POU6F1Q14863 301 aa7.15□□□□□ -1.27
RBBP4-214ENST00000492348 PCSK7Q16549 785 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms